RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 DMXL2Q8TDJ6 3036 aa9.13□□□□□ -0.95
USP13-201ENST00000263966 COL12A1Q99715 3063 aa9.1□□□□□ -0.95
USP13-201ENST00000263966 NDUFAF8A1L188 74 aa9.1□□□□□ -0.95
USP13-201ENST00000263966 LAMA1P25391 3075 aa9.07□□□□□ -0.96
USP13-201ENST00000263966 KRTAP10-10P60014 251 aa9.07□□□□□ -0.96
USP13-201ENST00000263966 UNC80Q8N2C7 3258 aa9.06□□□□□ -0.96
USP13-201ENST00000263966 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
USP13-201ENST00000263966 USP34Q70CQ2 3546 aa9.05□□□□□ -0.96
USP13-201ENST00000263966 LAMA3Q16787 3333 aa9.03□□□□□ -0.96
USP13-201ENST00000263966 CELSR2Q9HCU4 2923 aa9.02□□□□□ -0.97
USP13-201ENST00000263966 TNRC18O15417 2968 aaPredicted RBP9□□□□□ -0.97
USP13-201ENST00000263966 RANBP2P49792 3224 aaKnown RBP8.99□□□□□ -0.97
USP13-201ENST00000263966 A0A1B0GVY2 172 aa8.97□□□□□ -0.97
USP13-201ENST00000263966 TENM4Q6N022 2769 aa8.96□□□□□ -0.98
USP13-201ENST00000263966 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
USP13-201ENST00000263966 KRTAP11-1Q8IUC1 163 aa8.92□□□□□ -0.98
USP13-201ENST00000263966 NIPBLQ6KC79 2804 aaeCLIP8.91□□□□□ -0.98
USP13-201ENST00000263966 DNAH14Q0VDD8 3507 aa8.9□□□□□ -0.98
USP13-201ENST00000263966 HTTP42858 3142 aa8.9□□□□□ -0.98
USP13-201ENST00000263966 KRTAP13-1Q8IUC0 172 aa8.89□□□□□ -0.99
USP13-201ENST00000263966 ZZEF1O43149 2961 aa8.88□□□□□ -0.99
USP13-201ENST00000263966 XP32Q5T750 250 aa8.88□□□□□ -0.99
USP13-201ENST00000263966 A6NN06 94 aa8.87□□□□□ -0.99
USP13-201ENST00000263966 COL6A3P12111 3177 aa8.84□□□□□ -0.99
USP13-201ENST00000263966 VCANP13611 3396 aa8.84□□□□□ -0.99
USP13-201ENST00000263966 BOD1L1Q8NFC6 3051 aa8.83□□□□□ -1
USP13-201ENST00000263966 PDZD2O15018 2839 aa8.83□□□□□ -1
USP13-201ENST00000263966 BRCA2P51587 3418 aa8.81□□□□□ -1
USP13-201ENST00000263966 TACC2O95359 2948 aa8.81□□□□□ -1
USP13-201ENST00000263966 SPEGQ15772 3267 aa8.77□□□□□ -1
USP13-201ENST00000263966 DCHS2Q6V1P9 2916 aa8.76□□□□□ -1.01
USP13-201ENST00000263966 NBEAQ8NFP9 2946 aa8.75□□□□□ -1.01
USP13-201ENST00000263966 CELSR1Q9NYQ6 3014 aa8.73□□□□□ -1.01
USP13-201ENST00000263966 TGP01266 2768 aa8.72□□□□□ -1.01
USP13-201ENST00000263966 CFAP47Q6ZTR5 3102 aa8.72□□□□□ -1.01
USP13-201ENST00000263966 ATMQ13315 3056 aa8.71□□□□□ -1.02
USP13-201ENST00000263966 ADGRG4Q8IZF6 3080 aa8.68□□□□□ -1.02
USP13-201ENST00000263966 PKD1L1Q8TDX9 2849 aa8.67□□□□□ -1.02
USP13-201ENST00000263966 CDH23Q9H251 3354 aa8.65□□□□□ -1.02
USP13-201ENST00000263966 KRTAP7-1Q8IUC3 87 aa8.65□□□□□ -1.03
USP13-201ENST00000263966 VWFP04275 2813 aa8.64□□□□□ -1.03
USP13-201ENST00000263966 NBPF19A0A087WUL8 3843 aa8.6□□□□□ -1.03
USP13-201ENST00000263966 ZANQ9Y493 2812 aa8.55□□□□□ -1.04
USP13-201ENST00000263966 TENM2Q9NT68 2774 aa8.5□□□□□ -1.05
USP13-201ENST00000263966 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
USP13-201ENST00000263966 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
USP13-201ENST00000263966 DMXL1Q9Y485 3027 aa8.47□□□□□ -1.05
USP13-201ENST00000263966 H0YAA0 97 aa8.46□□□□□ -1.06
USP13-201ENST00000263966 FBN2P35556 2912 aa8.4□□□□□ -1.07
USP13-201ENST00000263966 ZFHX4Q86UP3 3567 aa8.37□□□□□ -1.07
USP13-201ENST00000263966 EYSQ5T1H1 3165 aa8.33□□□□□ -1.08
USP13-201ENST00000263966 SZT2Q5T011 3432 aa8.3□□□□□ -1.08
USP13-201ENST00000263966 COL7A1Q02388 2944 aa8.25□□□□□ -1.09
USP13-201ENST00000263966 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
USP13-201ENST00000263966 KRTAP13-4Q3LI77 160 aa8.2□□□□□ -1.1
USP13-201ENST00000263966 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
USP13-201ENST00000263966 SRRM2Q9UQ35 2752 aaKnown RBP8.2□□□□□ -1.1
USP13-201ENST00000263966 ZFHX3Q15911 3703 aa8.18□□□□□ -1.1
USP13-201ENST00000263966 SPTBN5Q9NRC6 3674 aaKnown RBP8.17□□□□□ -1.1
USP13-201ENST00000263966 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
USP13-201ENST00000263966 ASPMQ8IZT6 3477 aa8.08□□□□□ -1.12
USP13-201ENST00000263966 HRNRQ86YZ3 2850 aaPredicted RBP8.08□□□□□ -1.12
USP13-201ENST00000263966 MEGF8Q7Z7M0 2845 aa8.05□□□□□ -1.12
USP13-201ENST00000263966 WDFY3Q8IZQ1 3526 aa8.04□□□□□ -1.12
USP13-201ENST00000263966 LOC400499M0QZD8 3231 aa8.02□□□□□ -1.13
USP13-201ENST00000263966 MYO15AQ9UKN7 3530 aa8.02□□□□□ -1.13
USP13-201ENST00000263966 LAMA5O15230 3695 aa7.87□□□□□ -1.15
USP13-201ENST00000263966 KRTAP12-1P59990 96 aa7.83□□□□□ -1.16
USP13-201ENST00000263966 FBN3Q75N90 2809 aa7.81□□□□□ -1.16
USP13-201ENST00000263966 CRCT1Q9UGL9 99 aa7.76□□□□□ -1.17
USP13-201ENST00000263966 DMDP11532 3685 aa7.74□□□□□ -1.17
USP13-201ENST00000263966 INE1O15225 51 aa7.74□□□□□ -1.17
USP13-201ENST00000263966 KRTAP10-12P60413 245 aa7.71□□□□□ -1.17
USP13-201ENST00000263966 DCHS1Q96JQ0 3298 aa7.71□□□□□ -1.18
USP13-201ENST00000263966 SPENQ96T58 3664 aaKnown RBP7.71□□□□□ -1.18
USP13-201ENST00000263966 RELNP78509 3460 aa7.68□□□□□ -1.18
USP13-201ENST00000263966 FBN1P35555 2871 aaKnown RBP7.62□□□□□ -1.19
USP13-201ENST00000263966 SMG1Q96Q15 3661 aaKnown RBP7.57□□□□□ -1.2
USP13-201ENST00000263966 TRRAPQ9Y4A5 3859 aa7.48□□□□□ -1.21
USP13-201ENST00000263966 CSMD1Q96PZ7 3565 aa7.46□□□□□ -1.21
USP13-201ENST00000263966 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.23
USP13-201ENST00000263966 OTOGQ6ZRI0 2925 aa7.37□□□□□ -1.23
USP13-201ENST00000263966 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
USP13-201ENST00000263966 MUC3AQ02505 3323 aa7.32□□□□□ -1.24
USP13-201ENST00000263966 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
USP13-201ENST00000263966 VPS13CQ709C8 3753 aa7.29□□□□□ -1.24
USP13-201ENST00000263966 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
USP13-201ENST00000263966 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
USP13-201ENST00000263966 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
USP13-201ENST00000263966 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
USP13-201ENST00000263966 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
USP13-201ENST00000263966 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
USP13-201ENST00000263966 CUBNO60494 3623 aa7.1□□□□□ -1.27
USP13-201ENST00000263966 CSMD3Q7Z407 3707 aa7.09□□□□□ -1.27
USP13-201ENST00000263966 ALMS1Q8TCU4 4167 aa7.05□□□□□ -1.28
USP13-201ENST00000263966 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
USP13-201ENST00000263966 SVEP1Q4LDE5 3571 aa7□□□□□ -1.29
USP13-201ENST00000263966 BSNQ9UPA5 3926 aa6.98□□□□□ -1.29
USP13-201ENST00000263966 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.3
USP13-201ENST00000263966 KRTAP10-7P60409 375 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms