RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
SMG6-201ENST00000263073 NOTCH1P46531 2555 aa6.88□□□□□ -1.31
SMG6-201ENST00000263073 DCHS1Q96JQ0 3298 aa6.87□□□□□ -1.31
SMG6-201ENST00000263073 COL12A1Q99715 3063 aa6.86□□□□□ -1.31
SMG6-201ENST00000263073 IGSF10Q6WRI0 2623 aa6.85□□□□□ -1.31
SMG6-201ENST00000263073 ASB16-AS1Q495Z4 193 aa6.85□□□□□ -1.31
SMG6-201ENST00000263073 HRNRQ86YZ3 2850 aaPredicted RBP6.85□□□□□ -1.31
SMG6-201ENST00000263073 TEP1Q99973 2627 aaKnown RBP6.85□□□□□ -1.31
SMG6-201ENST00000263073 STAB1Q9NY15 2570 aa6.85□□□□□ -1.31
SMG6-201ENST00000263073 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
SMG6-201ENST00000263073 ASH1LQ9NR48 2969 aaKnown RBP6.84□□□□□ -1.31
SMG6-201ENST00000263073 LCE6AA0A183 80 aa6.83□□□□□ -1.32
SMG6-201ENST00000263073 RELNP78509 3460 aa6.8□□□□□ -1.32
SMG6-201ENST00000263073 COL6A5A8TX70 2615 aa6.8□□□□□ -1.32
SMG6-201ENST00000263073 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
SMG6-201ENST00000263073 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
SMG6-201ENST00000263073 SMG1Q96Q15 3661 aaKnown RBP6.77□□□□□ -1.33
SMG6-201ENST00000263073 ITPR1Q14643 2758 aa6.77□□□□□ -1.33
SMG6-201ENST00000263073 DCHS2Q6V1P9 2916 aa6.77□□□□□ -1.33
SMG6-201ENST00000263073 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
SMG6-201ENST00000263073 BAHCC1Q9P281 2608 aa6.76□□□□□ -1.33
SMG6-201ENST00000263073 A8MUU9 505 aa6.76□□□□□ -1.33
SMG6-201ENST00000263073 SETXQ7Z333 2677 aaKnown RBP6.75□□□□□ -1.33
SMG6-201ENST00000263073 ZANQ9Y493 2812 aa6.73□□□□□ -1.33
SMG6-201ENST00000263073 STAB2Q8WWQ8 2551 aa6.73□□□□□ -1.33
SMG6-201ENST00000263073 Q6ZRN7 208 aaPredicted RBP6.71□□□□□ -1.33
SMG6-201ENST00000263073 UBR5O95071 2799 aaPredicted RBP6.7□□□□□ -1.34
SMG6-201ENST00000263073 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
SMG6-201ENST00000263073 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
SMG6-201ENST00000263073 SPENQ96T58 3664 aaKnown RBP6.67□□□□□ -1.34
SMG6-201ENST00000263073 APCP25054 2843 aa6.67□□□□□ -1.34
SMG6-201ENST00000263073 NSD1Q96L73 2696 aaPredicted RBP6.66□□□□□ -1.34
SMG6-201ENST00000263073 HIVEP1P15822 2718 aa6.64□□□□□ -1.35
SMG6-201ENST00000263073 UTP20O75691 2785 aaKnown RBP6.63□□□□□ -1.35
SMG6-201ENST00000263073 CRYBG3Q68DQ2 2970 aa6.62□□□□□ -1.35
SMG6-201ENST00000263073 MXRA5Q9NR99 2828 aa6.57□□□□□ -1.36
SMG6-201ENST00000263073 NF1P21359 2839 aa6.56□□□□□ -1.36
SMG6-201ENST00000263073 CSMD1Q96PZ7 3565 aa6.56□□□□□ -1.36
SMG6-201ENST00000263073 BSNQ9UPA5 3926 aa6.55□□□□□ -1.36
SMG6-201ENST00000263073 CELSR2Q9HCU4 2923 aa6.54□□□□□ -1.36
SMG6-201ENST00000263073 ITPR2Q14571 2701 aa6.54□□□□□ -1.36
SMG6-201ENST00000263073 CELSR1Q9NYQ6 3014 aa6.54□□□□□ -1.36
SMG6-201ENST00000263073 SVEP1Q4LDE5 3571 aa6.54□□□□□ -1.36
SMG6-201ENST00000263073 KRTAP21-3Q3LHN1 58 aa6.53□□□□□ -1.36
SMG6-201ENST00000263073 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
SMG6-201ENST00000263073 H0YAA0 97 aa6.52□□□□□ -1.37
SMG6-201ENST00000263073 FBN2P35556 2912 aa6.5□□□□□ -1.37
SMG6-201ENST00000263073 TNP1P09430 55 aa6.48□□□□□ -1.37
SMG6-201ENST00000263073 A0A1B0GVY2 172 aa6.45□□□□□ -1.38
SMG6-201ENST00000263073 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
SMG6-201ENST00000263073 KMT2BQ9UMN6 2715 aaPredicted RBP6.38□□□□□ -1.39
SMG6-201ENST00000263073 NIPBLQ6KC79 2804 aaeCLIP6.36□□□□□ -1.39
SMG6-201ENST00000263073 KRTAP1-4P0C5Y4 121 aa6.35□□□□□ -1.39
SMG6-201ENST00000263073 P0C880 135 aa6.33□□□□□ -1.4
SMG6-201ENST00000263073 XP32Q5T750 250 aa6.33□□□□□ -1.4
SMG6-201ENST00000263073 TENM4Q6N022 2769 aa6.28□□□□□ -1.4
SMG6-201ENST00000263073 CSMD2Q7Z408 3487 aa6.27□□□□□ -1.41
SMG6-201ENST00000263073 VWFP04275 2813 aa6.21□□□□□ -1.42
SMG6-201ENST00000263073 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
SMG6-201ENST00000263073 PDZD2O15018 2839 aa6.21□□□□□ -1.42
SMG6-201ENST00000263073 CUBNO60494 3623 aa6.2□□□□□ -1.42
SMG6-201ENST00000263073 TENM1Q9UKZ4 2725 aa6.19□□□□□ -1.42
SMG6-201ENST00000263073 VPS13CQ709C8 3753 aa6.19□□□□□ -1.42
SMG6-201ENST00000263073 KRTAP12-2P59991 146 aa6.15□□□□□ -1.43
SMG6-201ENST00000263073 OTOGQ6ZRI0 2925 aa6.14□□□□□ -1.43
SMG6-201ENST00000263073 TGP01266 2768 aa6.13□□□□□ -1.43
SMG6-201ENST00000263073 KRTAP10-10P60014 251 aa6.09□□□□□ -1.43
SMG6-201ENST00000263073 ZFHX3Q15911 3703 aa6.09□□□□□ -1.44
SMG6-201ENST00000263073 KRTAP13-3Q3SY46 172 aa6.08□□□□□ -1.44
SMG6-201ENST00000263073 TENM3Q9P273 2699 aa6.05□□□□□ -1.44
SMG6-201ENST00000263073 TPRXLQ17RH7 258 aa6.04□□□□□ -1.44
SMG6-201ENST00000263073 NBPF19A0A087WUL8 3843 aa6.02□□□□□ -1.45
SMG6-201ENST00000263073 ZNF469Q96JG9 3925 aaPredicted RBP5.98□□□□□ -1.45
SMG6-201ENST00000263073 TENM2Q9NT68 2774 aa5.97□□□□□ -1.45
SMG6-201ENST00000263073 ANK3Q12955 4377 aaKnown RBP5.96□□□□□ -1.45
SMG6-201ENST00000263073 FBN1P35555 2871 aaKnown RBP5.94□□□□□ -1.46
SMG6-201ENST00000263073 PKD1L1Q8TDX9 2849 aa5.93□□□□□ -1.46
SMG6-201ENST00000263073 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
SMG6-201ENST00000263073 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.46
SMG6-201ENST00000263073 TRRAPQ9Y4A5 3859 aa5.87□□□□□ -1.47
SMG6-201ENST00000263073 KRTAP13-4Q3LI77 160 aa5.87□□□□□ -1.47
SMG6-201ENST00000263073 AKAP9Q99996 3911 aa5.85□□□□□ -1.47
SMG6-201ENST00000263073 PRO2289Q9P1D8 64 aa5.85□□□□□ -1.47
SMG6-201ENST00000263073 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
SMG6-201ENST00000263073 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
SMG6-201ENST00000263073 SRRM2Q9UQ35 2752 aaKnown RBP5.59□□□□□ -1.52
SMG6-201ENST00000263073 FBN3Q75N90 2809 aa5.58□□□□□ -1.52
SMG6-201ENST00000263073 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
SMG6-201ENST00000263073 CSMD3Q7Z407 3707 aa5.53□□□□□ -1.52
SMG6-201ENST00000263073 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
SMG6-201ENST00000263073 ALMS1Q8TCU4 4167 aa5.5□□□□□ -1.53
SMG6-201ENST00000263073 KRTAP3-2Q9BYR7 98 aa5.5□□□□□ -1.53
SMG6-201ENST00000263073 HUWE1Q7Z6Z7 4374 aaKnown RBP5.49□□□□□ -1.53
SMG6-201ENST00000263073 KRTAP3-3Q9BYR6 98 aa5.49□□□□□ -1.53
SMG6-201ENST00000263073 COL7A1Q02388 2944 aa5.43□□□□□ -1.54
SMG6-201ENST00000263073 ANK2Q01484 3957 aa5.33□□□□□ -1.56
SMG6-201ENST00000263073 INE1O15225 51 aa5.33□□□□□ -1.56
SMG6-201ENST00000263073 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
SMG6-201ENST00000263073 DNAH9Q9NYC9 4486 aa5.31□□□□□ -1.56
SMG6-201ENST00000263073 MT1HL1P0DM35 61 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms