RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 A0A087WTM6 91 aa10.35□□□□□ -0.75
TRAM1-201ENST00000262213 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
TRAM1-201ENST00000262213 Q5W150 140 aa10.35□□□□□ -0.75
TRAM1-201ENST00000262213 RTL8CO15255 209 aa10.34□□□□□ -0.75
TRAM1-201ENST00000262213 ATP11AUNQ6ZP68 121 aa10.34□□□□□ -0.75
TRAM1-201ENST00000262213 PRR26Q8N8Z3 221 aa10.34□□□□□ -0.75
TRAM1-201ENST00000262213 SPINK7P58062 85 aa10.33□□□□□ -0.76
TRAM1-201ENST00000262213 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
TRAM1-201ENST00000262213 FRAS1Q86XX4 4008 aa10.33□□□□□ -0.76
TRAM1-201ENST00000262213 ZNF861PO60384 105 aa10.32□□□□□ -0.76
TRAM1-201ENST00000262213 CDC42SE1Q9NRR8 79 aa10.31□□□□□ -0.76
TRAM1-201ENST00000262213 NUPR2A6NF83 97 aa10.3□□□□□ -0.76
TRAM1-201ENST00000262213 DNHD1Q96M86 4753 aa10.3□□□□□ -0.76
TRAM1-201ENST00000262213 RETNLBQ9BQ08 111 aa10.3□□□□□ -0.76
TRAM1-201ENST00000262213 KTN1-AS1Q86SY8 53 aa10.29□□□□□ -0.76
TRAM1-201ENST00000262213 PLAC8Q9NZF1 115 aa10.28□□□□□ -0.76
TRAM1-201ENST00000262213 DNAH8Q96JB1 4490 aa10.28□□□□□ -0.76
TRAM1-201ENST00000262213 DYNC2H1Q8NCM8 4307 aaKnown RBP10.27□□□□□ -0.77
TRAM1-201ENST00000262213 A6NN06 94 aa10.25□□□□□ -0.77
TRAM1-201ENST00000262213 TGP01266 2768 aa10.24□□□□□ -0.77
TRAM1-201ENST00000262213 HECTD4Q9Y4D8 3996 aa10.23□□□□□ -0.77
TRAM1-201ENST00000262213 STARD9Q9P2P6 4700 aa10.22□□□□□ -0.77
TRAM1-201ENST00000262213 PRKDCP78527 4128 aaKnown RBP10.2□□□□□ -0.78
TRAM1-201ENST00000262213 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
TRAM1-201ENST00000262213 KRTAP13-3Q3SY46 172 aa10.19□□□□□ -0.78
TRAM1-201ENST00000262213 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
TRAM1-201ENST00000262213 RBM12B-AS1Q9P1G2 102 aa10.18□□□□□ -0.78
TRAM1-201ENST00000262213 ACYP2P14621 99 aa10.16□□□□□ -0.78
TRAM1-201ENST00000262213 KMT2AQ03164 3969 aa10.16□□□□□ -0.78
TRAM1-201ENST00000262213 VPS13DQ5THJ4 4388 aa10.14□□□□□ -0.79
TRAM1-201ENST00000262213 KRTAP21-3Q3LHN1 58 aa10.14□□□□□ -0.79
TRAM1-201ENST00000262213 FBN3Q75N90 2809 aa10.13□□□□□ -0.79
TRAM1-201ENST00000262213 DNAH17Q9UFH2 4485 aa10.12□□□□□ -0.79
TRAM1-201ENST00000262213 LINC00313P59037 77 aa10.11□□□□□ -0.79
TRAM1-201ENST00000262213 DNAH2Q9P225 4427 aa10.09□□□□□ -0.79
TRAM1-201ENST00000262213 C7orf65Q6ZTY9 151 aa10.09□□□□□ -0.79
TRAM1-201ENST00000262213 C8orf87E5RJ46 101 aa10.08□□□□□ -0.8
TRAM1-201ENST00000262213 C1orf134Q5TEV5 83 aa10.07□□□□□ -0.8
TRAM1-201ENST00000262213 DMAC1Q96GE9 116 aa10.06□□□□□ -0.8
TRAM1-201ENST00000262213 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
TRAM1-201ENST00000262213 FAM229AH3BQW9 127 aa10.03□□□□□ -0.8
TRAM1-201ENST00000262213 A0A1B0GU69 56 aa10.03□□□□□ -0.8
TRAM1-201ENST00000262213 ALMS1Q8TCU4 4167 aa10.01□□□□□ -0.81
TRAM1-201ENST00000262213 LY6G6CO95867 125 aa10.01□□□□□ -0.81
TRAM1-201ENST00000262213 IGKV2D-30A0A075B6S6 120 aa10.01□□□□□ -0.81
TRAM1-201ENST00000262213 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
TRAM1-201ENST00000262213 KRTAP13-2Q52LG2 175 aa9.99□□□□□ -0.81
TRAM1-201ENST00000262213 PRAC1Q96KF2 57 aa9.98□□□□□ -0.81
TRAM1-201ENST00000262213 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
TRAM1-201ENST00000262213 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
TRAM1-201ENST00000262213 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
TRAM1-201ENST00000262213 DNAH11Q96DT5 4516 aa9.91□□□□□ -0.82
TRAM1-201ENST00000262213 KRTAP16-1A8MUX0 517 aa9.9□□□□□ -0.82
TRAM1-201ENST00000262213 SPINK1P00995 79 aa9.87□□□□□ -0.83
TRAM1-201ENST00000262213 MIR22HGQ0VDD5 57 aa9.86□□□□□ -0.83
TRAM1-201ENST00000262213 DNAH5Q8TE73 4624 aa9.84□□□□□ -0.83
TRAM1-201ENST00000262213 KRTAP10-1P60331 282 aa9.83□□□□□ -0.84
TRAM1-201ENST00000262213 SPATA8Q6RVD6 105 aa9.83□□□□□ -0.84
TRAM1-201ENST00000262213 UQCR11O14957 56 aa9.83□□□□□ -0.84
TRAM1-201ENST00000262213 Q8N1X5 172 aa9.8□□□□□ -0.84
TRAM1-201ENST00000262213 LRP1BQ9NZR2 4599 aa9.8□□□□□ -0.84
TRAM1-201ENST00000262213 C4orf48Q5BLP8 95 aa9.79□□□□□ -0.84
TRAM1-201ENST00000262213 KRTAP1-4P0C5Y4 121 aa9.78□□□□□ -0.84
TRAM1-201ENST00000262213 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
TRAM1-201ENST00000262213 TYMSOSQ8TAI1 123 aa9.75□□□□□ -0.85
TRAM1-201ENST00000262213 Q6ZSA8 131 aa9.69□□□□□ -0.86
TRAM1-201ENST00000262213 VPS13BQ7Z7G8 4022 aa9.66□□□□□ -0.86
TRAM1-201ENST00000262213 PKD1P98161 4303 aa9.62□□□□□ -0.87
TRAM1-201ENST00000262213 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
TRAM1-201ENST00000262213 C9orf92A6NGG3 77 aa9.6□□□□□ -0.87
TRAM1-201ENST00000262213 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
TRAM1-201ENST00000262213 HYDINQ4G0P3 5121 aa9.59□□□□□ -0.87
TRAM1-201ENST00000262213 LINC00304Q8N9R0 145 aa9.57□□□□□ -0.88
TRAM1-201ENST00000262213 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
TRAM1-201ENST00000262213 SMR3BP02814 79 aaPredicted RBP9.51□□□□□ -0.89
TRAM1-201ENST00000262213 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
TRAM1-201ENST00000262213 H0YAA0 97 aa9.48□□□□□ -0.89
TRAM1-201ENST00000262213 KRTAP3-1Q9BYR8 98 aa9.43□□□□□ -0.9
TRAM1-201ENST00000262213 A0A1B0GU33 70 aa9.41□□□□□ -0.9
TRAM1-201ENST00000262213 PKHD1P08F94 4074 aa9.4□□□□□ -0.91
TRAM1-201ENST00000262213 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
TRAM1-201ENST00000262213 A8MUU9 505 aa9.36□□□□□ -0.91
TRAM1-201ENST00000262213 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
TRAM1-201ENST00000262213 RPS29P62273 56 aaKnown RBP9.34□□□□□ -0.91
TRAM1-201ENST00000262213 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
TRAM1-201ENST00000262213 CRIPTQ9P021 101 aa9.29□□□□□ -0.92
TRAM1-201ENST00000262213 RYR2Q92736 4967 aa9.28□□□□□ -0.92
TRAM1-201ENST00000262213 FAT1Q14517 4588 aa9.27□□□□□ -0.93
TRAM1-201ENST00000262213 KRTAP25-1Q3LHN0 102 aa9.22□□□□□ -0.93
TRAM1-201ENST00000262213 DYNC1H1Q14204 4646 aaKnown RBP9.21□□□□□ -0.93
TRAM1-201ENST00000262213 KMT2CQ8NEZ4 4911 aaKnown RBP9.21□□□□□ -0.94
TRAM1-201ENST00000262213 COX6B2Q6YFQ2 88 aa9.2□□□□□ -0.94
TRAM1-201ENST00000262213 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
TRAM1-201ENST00000262213 A0A1B0GVY2 172 aa9.17□□□□□ -0.94
TRAM1-201ENST00000262213 K7ERS5 55 aa9.15□□□□□ -0.95
TRAM1-201ENST00000262213 H3BS24 57 aa9.12□□□□□ -0.95
TRAM1-201ENST00000262213 KRTAP10-4P60372 401 aaPredicted RBP9.12□□□□□ -0.95
TRAM1-201ENST00000262213 PKHD1L1Q86WI1 4243 aa9.1□□□□□ -0.95
TRAM1-201ENST00000262213 A0A0D9SG42 100 aa9.09□□□□□ -0.95
TRAM1-201ENST00000262213 APOBP04114 4563 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms