RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 ROMO1P60602 79 aa5.88□□□□□ -1.47
PUM1-201ENST00000257075 SPATA8Q6RVD6 105 aa5.87□□□□□ -1.47
PUM1-201ENST00000257075 DCHS2Q6V1P9 2916 aa5.87□□□□□ -1.47
PUM1-201ENST00000257075 SZT2Q5T011 3432 aa5.86□□□□□ -1.47
PUM1-201ENST00000257075 TNRC18O15417 2968 aaPredicted RBP5.86□□□□□ -1.47
PUM1-201ENST00000257075 TENM1Q9UKZ4 2725 aa5.86□□□□□ -1.47
PUM1-201ENST00000257075 KALRNO60229 2985 aa5.86□□□□□ -1.47
PUM1-201ENST00000257075 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
PUM1-201ENST00000257075 COL6A3P12111 3177 aa5.84□□□□□ -1.47
PUM1-201ENST00000257075 ADGRG4Q8IZF6 3080 aa5.83□□□□□ -1.48
PUM1-201ENST00000257075 TENM2Q9NT68 2774 aa5.83□□□□□ -1.48
PUM1-201ENST00000257075 TPRXLQ17RH7 258 aa5.81□□□□□ -1.48
PUM1-201ENST00000257075 XP32Q5T750 250 aa5.81□□□□□ -1.48
PUM1-201ENST00000257075 Q5VV11 94 aa5.81□□□□□ -1.48
PUM1-201ENST00000257075 NF1P21359 2839 aa5.81□□□□□ -1.48
PUM1-201ENST00000257075 CELSR3Q9NYQ7 3312 aa5.8□□□□□ -1.48
PUM1-201ENST00000257075 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
PUM1-201ENST00000257075 VCANP13611 3396 aa5.79□□□□□ -1.48
PUM1-201ENST00000257075 ZANQ9Y493 2812 aa5.78□□□□□ -1.48
PUM1-201ENST00000257075 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
PUM1-201ENST00000257075 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
PUM1-201ENST00000257075 FREM2Q5SZK8 3169 aa5.75□□□□□ -1.49
PUM1-201ENST00000257075 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
PUM1-201ENST00000257075 PRAC1Q96KF2 57 aa5.72□□□□□ -1.49
PUM1-201ENST00000257075 TNP1P09430 55 aa5.71□□□□□ -1.49
PUM1-201ENST00000257075 PKD1L1Q8TDX9 2849 aa5.69□□□□□ -1.5
PUM1-201ENST00000257075 DMXL1Q9Y485 3027 aa5.69□□□□□ -1.5
PUM1-201ENST00000257075 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
PUM1-201ENST00000257075 KRTAP10-8P60410 259 aa5.69□□□□□ -1.5
PUM1-201ENST00000257075 MXRA5Q9NR99 2828 aa5.68□□□□□ -1.5
PUM1-201ENST00000257075 CFAP47Q6ZTR5 3102 aa5.67□□□□□ -1.5
PUM1-201ENST00000257075 A8MU10 97 aa5.65□□□□□ -1.5
PUM1-201ENST00000257075 KRTAP13-3Q3SY46 172 aa5.63□□□□□ -1.51
PUM1-201ENST00000257075 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
PUM1-201ENST00000257075 USP34Q70CQ2 3546 aa5.57□□□□□ -1.52
PUM1-201ENST00000257075 FBN2P35556 2912 aa5.56□□□□□ -1.52
PUM1-201ENST00000257075 HRNRQ86YZ3 2850 aaPredicted RBP5.54□□□□□ -1.52
PUM1-201ENST00000257075 VWFP04275 2813 aa5.53□□□□□ -1.52
PUM1-201ENST00000257075 SPEGQ15772 3267 aa5.52□□□□□ -1.53
PUM1-201ENST00000257075 CELSR1Q9NYQ6 3014 aa5.5□□□□□ -1.53
PUM1-201ENST00000257075 PDZD2O15018 2839 aa5.46□□□□□ -1.54
PUM1-201ENST00000257075 TGP01266 2768 aa5.44□□□□□ -1.54
PUM1-201ENST00000257075 KRTAP16-1A8MUX0 517 aa5.43□□□□□ -1.54
PUM1-201ENST00000257075 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
PUM1-201ENST00000257075 DNAH14Q0VDD8 3507 aa5.42□□□□□ -1.54
PUM1-201ENST00000257075 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
PUM1-201ENST00000257075 DCHS1Q96JQ0 3298 aa5.4□□□□□ -1.55
PUM1-201ENST00000257075 SRRM2Q9UQ35 2752 aaKnown RBP5.39□□□□□ -1.55
PUM1-201ENST00000257075 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
PUM1-201ENST00000257075 SPTBN5Q9NRC6 3674 aaKnown RBP5.38□□□□□ -1.55
PUM1-201ENST00000257075 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.55
PUM1-201ENST00000257075 OTOGQ6ZRI0 2925 aa5.33□□□□□ -1.56
PUM1-201ENST00000257075 FBN3Q75N90 2809 aa5.32□□□□□ -1.56
PUM1-201ENST00000257075 MYO15AQ9UKN7 3530 aa5.3□□□□□ -1.56
PUM1-201ENST00000257075 P0C880 135 aa5.3□□□□□ -1.56
PUM1-201ENST00000257075 FBN1P35555 2871 aaKnown RBP5.29□□□□□ -1.56
PUM1-201ENST00000257075 A6NN06 94 aa5.26□□□□□ -1.57
PUM1-201ENST00000257075 ZFHX3Q15911 3703 aa5.21□□□□□ -1.58
PUM1-201ENST00000257075 H0YAA0 97 aa5.2□□□□□ -1.58
PUM1-201ENST00000257075 RELNP78509 3460 aa5.17□□□□□ -1.58
PUM1-201ENST00000257075 NBPF19A0A087WUL8 3843 aa5.17□□□□□ -1.58
PUM1-201ENST00000257075 H3BS24 57 aa5.17□□□□□ -1.58
PUM1-201ENST00000257075 MT1HL1P0DM35 61 aa5.14□□□□□ -1.59
PUM1-201ENST00000257075 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
PUM1-201ENST00000257075 WDFY3Q8IZQ1 3526 aa5.1□□□□□ -1.59
PUM1-201ENST00000257075 KRTAP4-5Q9BYR2 181 aa5.09□□□□□ -1.6
PUM1-201ENST00000257075 COL7A1Q02388 2944 aa5□□□□□ -1.61
PUM1-201ENST00000257075 KRTAP13-4Q3LI77 160 aa4.99□□□□□ -1.61
PUM1-201ENST00000257075 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
PUM1-201ENST00000257075 ZFHX4Q86UP3 3567 aa4.96□□□□□ -1.62
PUM1-201ENST00000257075 ANK3Q12955 4377 aaKnown RBP4.96□□□□□ -1.62
PUM1-201ENST00000257075 KRTAP3-1Q9BYR8 98 aa4.94□□□□□ -1.62
PUM1-201ENST00000257075 MEGF8Q7Z7M0 2845 aa4.93□□□□□ -1.62
PUM1-201ENST00000257075 LAMA5O15230 3695 aa4.93□□□□□ -1.62
PUM1-201ENST00000257075 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
PUM1-201ENST00000257075 KRTAP10-4P60372 401 aaPredicted RBP4.91□□□□□ -1.62
PUM1-201ENST00000257075 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
PUM1-201ENST00000257075 ASPMQ8IZT6 3477 aa4.87□□□□□ -1.63
PUM1-201ENST00000257075 CSMD2Q7Z408 3487 aa4.8□□□□□ -1.64
PUM1-201ENST00000257075 TRRAPQ9Y4A5 3859 aa4.77□□□□□ -1.65
PUM1-201ENST00000257075 KRTAP10-12P60413 245 aa4.77□□□□□ -1.65
PUM1-201ENST00000257075 MUC3AQ02505 3323 aa4.76□□□□□ -1.65
PUM1-201ENST00000257075 KRTAP10-6P60371 365 aaPredicted RBP4.76□□□□□ -1.65
PUM1-201ENST00000257075 CSMD1Q96PZ7 3565 aa4.76□□□□□ -1.65
PUM1-201ENST00000257075 SMG1Q96Q15 3661 aaKnown RBP4.75□□□□□ -1.65
PUM1-201ENST00000257075 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
PUM1-201ENST00000257075 ALMS1Q8TCU4 4167 aa4.68□□□□□ -1.66
PUM1-201ENST00000257075 HUWE1Q7Z6Z7 4374 aaKnown RBP4.66□□□□□ -1.66
PUM1-201ENST00000257075 DMDP11532 3685 aa4.65□□□□□ -1.66
PUM1-201ENST00000257075 KRTAP3-3Q9BYR6 98 aa4.63□□□□□ -1.67
PUM1-201ENST00000257075 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
PUM1-201ENST00000257075 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
PUM1-201ENST00000257075 KRTAP3-2Q9BYR7 98 aa4.59□□□□□ -1.68
PUM1-201ENST00000257075 KRTAP12-3P60328 96 aa4.56□□□□□ -1.68
PUM1-201ENST00000257075 DNHD1Q96M86 4753 aa4.53□□□□□ -1.68
PUM1-201ENST00000257075 DNAH5Q8TE73 4624 aa4.53□□□□□ -1.68
PUM1-201ENST00000257075 CUBNO60494 3623 aa4.52□□□□□ -1.69
PUM1-201ENST00000257075 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
PUM1-201ENST00000257075 MT1HP80294 61 aa4.5□□□□□ -1.69
PUM1-201ENST00000257075 SPENQ96T58 3664 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms