RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
PUM1-201ENST00000257075 NISCHQ9Y2I1 1504 aa18■□□□□ 0.47
PUM1-201ENST00000257075 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
PUM1-201ENST00000257075 SHROOM4Q9ULL8 1493 aa17.42■□□□□ 0.38
PUM1-201ENST00000257075 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
PUM1-201ENST00000257075 EHMT2Q96KQ7 1210 aa17.12■□□□□ 0.33
PUM1-201ENST00000257075 APLP2Q06481 763 aa17.02■□□□□ 0.32
PUM1-201ENST00000257075 ATP1B4Q9UN42 357 aaPredicted RBP16.61■□□□□ 0.25
PUM1-201ENST00000257075 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
PUM1-201ENST00000257075 TTBK1Q5TCY1 1321 aaPredicted RBP16.44■□□□□ 0.22
PUM1-201ENST00000257075 TRIM41Q8WV44 630 aa16.43■□□□□ 0.22
PUM1-201ENST00000257075 UBTFP17480 764 aaKnown RBP16.36■□□□□ 0.21
PUM1-201ENST00000257075 MYT1LQ9UL68 1186 aa16.28■□□□□ 0.2
PUM1-201ENST00000257075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.21■□□□□ 0.18
PUM1-201ENST00000257075 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.18
PUM1-201ENST00000257075 ABCC9O60706 1549 aa16.15■□□□□ 0.18
PUM1-201ENST00000257075 PELP1Q8IZL8 1130 aaKnown RBP16.13■□□□□ 0.17
PUM1-201ENST00000257075 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
PUM1-201ENST00000257075 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
PUM1-201ENST00000257075 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
PUM1-201ENST00000257075 CHIC1Q5VXU3 224 aa15.84■□□□□ 0.13
PUM1-201ENST00000257075 FBLN2P98095 1184 aa15.79■□□□□ 0.12
PUM1-201ENST00000257075 ITGAEP38570 1179 aa15.75■□□□□ 0.11
PUM1-201ENST00000257075 ZEB1P37275 1124 aaPredicted RBP15.66■□□□□ 0.1
PUM1-201ENST00000257075 PPARGC1BQ86YN6 1023 aaKnown RBP15.66■□□□□ 0.1
PUM1-201ENST00000257075 POLR3GLQ9BT43 218 aa15.62■□□□□ 0.09
PUM1-201ENST00000257075 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
PUM1-201ENST00000257075 CENPBP07199 599 aaPredicted RBP15.47■□□□□ 0.07
PUM1-201ENST00000257075 NEFLP07196 543 aa15.44■□□□□ 0.06
PUM1-201ENST00000257075 FAM50AQ14320 339 aaKnown RBP15.41■□□□□ 0.06
PUM1-201ENST00000257075 NPM1P06748 294 aaKnown RBP eCLIP15.4■□□□□ 0.06
PUM1-201ENST00000257075 ESF1Q9H501 851 aaKnown RBP15.38■□□□□ 0.05
PUM1-201ENST00000257075 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
PUM1-201ENST00000257075 TRIM52Q96A61 297 aa15.38■□□□□ 0.05
PUM1-201ENST00000257075 BCANQ96GW7 911 aa15.38■□□□□ 0.05
PUM1-201ENST00000257075 CNGB1Q14028 1251 aaPredicted RBP15.35■□□□□ 0.05
PUM1-201ENST00000257075 LOC105371045A0A1W2PR82 267 aa15.3■□□□□ 0.04
PUM1-201ENST00000257075 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
PUM1-201ENST00000257075 ARID3CA6NKF2 412 aa15.27■□□□□ 0.03
PUM1-201ENST00000257075 CDK11AQ9UQ88 783 aaPredicted RBP15.24■□□□□ 0.03
PUM1-201ENST00000257075 YTHDC1Q96MU7 727 aaKnown RBP15.23■□□□□ 0.03
PUM1-201ENST00000257075 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
PUM1-201ENST00000257075 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
PUM1-201ENST00000257075 SCRIBQ14160 1630 aa15.19■□□□□ 0.02
PUM1-201ENST00000257075 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
PUM1-201ENST00000257075 ZNF326Q5BKZ1 582 aaKnown RBP15.15■□□□□ 0.02
PUM1-201ENST00000257075 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
PUM1-201ENST00000257075 CHMP7Q8WUX9 453 aaPredicted RBP15.08■□□□□ 0.01
PUM1-201ENST00000257075 SLC24A1O60721 1099 aa15.06■□□□□ 0
PUM1-201ENST00000257075 NEUROD1Q13562 356 aa15.06■□□□□ 0
PUM1-201ENST00000257075 DAXXQ9UER7 740 aaPredicted RBP15.05■□□□□ -0
PUM1-201ENST00000257075 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
PUM1-201ENST00000257075 CHGAP10645 457 aaKnown RBP15.02□□□□□ -0.01
PUM1-201ENST00000257075 NEFMP07197 916 aa15□□□□□ -0.01
PUM1-201ENST00000257075 RB1CC1Q8TDY2 1594 aa14.94□□□□□ -0.02
PUM1-201ENST00000257075 CLSPNQ9HAW4 1339 aa14.91□□□□□ -0.02
PUM1-201ENST00000257075 ZBTB47Q9UFB7 747 aaPredicted RBP14.89□□□□□ -0.03
PUM1-201ENST00000257075 ERCC6Q03468 1493 aa14.85□□□□□ -0.03
PUM1-201ENST00000257075 TSPY4P0CV99 314 aa14.83□□□□□ -0.04
PUM1-201ENST00000257075 TSPY10P0CW01 314 aa14.83□□□□□ -0.04
PUM1-201ENST00000257075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.042e-6■□□□□ 10.4
PUM1-201ENST00000257075 HRCP23327 699 aa14.81□□□□□ -0.04
PUM1-201ENST00000257075 ARID4BQ4LE39 1312 aaPredicted RBP14.81□□□□□ -0.04
PUM1-201ENST00000257075 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
PUM1-201ENST00000257075 KCNH8Q96L42 1107 aa14.8□□□□□ -0.04
PUM1-201ENST00000257075 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
PUM1-201ENST00000257075 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.05
PUM1-201ENST00000257075 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
PUM1-201ENST00000257075 C14orf37Q86TY3 774 aa14.73□□□□□ -0.05
PUM1-201ENST00000257075 ANP32CO43423 234 aa14.73□□□□□ -0.05
PUM1-201ENST00000257075 PLEKHD1A6NEE1 506 aa14.72□□□□□ -0.05
PUM1-201ENST00000257075 CANXP27824 592 aaKnown RBP14.72□□□□□ -0.05
PUM1-201ENST00000257075 PPP1R15AO75807 674 aaPredicted RBP14.71□□□□□ -0.05
PUM1-201ENST00000257075 BCL11AQ9H165 835 aa14.68□□□□□ -0.06
PUM1-201ENST00000257075 CHIC2Q9UKJ5 165 aa14.68□□□□□ -0.06
PUM1-201ENST00000257075 A0A0G2JS52 829 aa14.68□□□□□ -0.06
PUM1-201ENST00000257075 NACADO15069 1562 aa14.67□□□□□ -0.06
PUM1-201ENST00000257075 MTUS2Q5JR59 1369 aa14.66□□□□□ -0.06
PUM1-201ENST00000257075 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
PUM1-201ENST00000257075 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
PUM1-201ENST00000257075 HAP1P54257 671 aaPredicted RBP14.62□□□□□ -0.07
PUM1-201ENST00000257075 NPM2Q86SE8 214 aaKnown RBP14.6□□□□□ -0.07
PUM1-201ENST00000257075 DIEXFQ68CQ4 756 aaKnown RBP14.59□□□□□ -0.07
PUM1-201ENST00000257075 TONSLQ96HA7 1378 aa14.57□□□□□ -0.08
PUM1-201ENST00000257075 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
PUM1-201ENST00000257075 ZBTB7CA1YPR0 619 aa14.55□□□□□ -0.08
PUM1-201ENST00000257075 SENP3Q9H4L4 574 aaPredicted RBP14.54□□□□□ -0.08
PUM1-201ENST00000257075 KDM2AQ9Y2K7 1162 aa14.52□□□□□ -0.09
PUM1-201ENST00000257075 CFDP1Q9UEE9 299 aaPredicted RBP14.48□□□□□ -0.09
PUM1-201ENST00000257075 RSF1Q96T23 1441 aaPredicted RBP14.48□□□□□ -0.09
PUM1-201ENST00000257075 KIF27Q86VH2 1401 aa14.44□□□□□ -0.1
PUM1-201ENST00000257075 MLECQ14165 292 aa14.41□□□□□ -0.1
PUM1-201ENST00000257075 RRP7BPQ9NSQ0 103 aa14.41□□□□□ -0.1
PUM1-201ENST00000257075 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.11e-10■□□□□ 9.9
PUM1-201ENST00000257075 LMOD2Q6P5Q4 547 aa14.4□□□□□ -0.1
PUM1-201ENST00000257075 CLIP1P30622 1438 aa14.38□□□□□ -0.11
PUM1-201ENST00000257075 PDS5BQ9NTI5 1447 aa14.38□□□□□ -0.11
PUM1-201ENST00000257075 ACIN1Q9UKV3 1341 aaKnown RBP14.37□□□□□ -0.11
PUM1-201ENST00000257075 HDGFP51858 240 aaKnown RBP14.37□□□□□ -0.11
PUM1-201ENST00000257075 MYT1Q01538 1121 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms