RNA–Protein interactions for RNA: ENST00000222990.7

SNX8-201, Transcript of sorting nexin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX8, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-201ENST00000222990 NOTCH2NLQ7Z3S9 236 aa11.57□□□□□ -0.56
SNX8-201ENST00000222990 DMBT1Q9UGM3 2413 aaPredicted RBP11.56□□□□□ -0.56
SNX8-201ENST00000222990 TENM4Q6N022 2769 aa11.56□□□□□ -0.56
SNX8-201ENST00000222990 KRTAP13-1Q8IUC0 172 aa11.55□□□□□ -0.56
SNX8-201ENST00000222990 DCHS1Q96JQ0 3298 aa11.54□□□□□ -0.56
SNX8-201ENST00000222990 COX6B2Q6YFQ2 88 aa11.53□□□□□ -0.56
SNX8-201ENST00000222990 LAMA5O15230 3695 aa11.5□□□□□ -0.57
SNX8-201ENST00000222990 ASPMQ8IZT6 3477 aa11.47□□□□□ -0.57
SNX8-201ENST00000222990 ASB16-AS1Q495Z4 193 aa11.47□□□□□ -0.57
SNX8-201ENST00000222990 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.58
SNX8-201ENST00000222990 Q6ZSA8 131 aa11.45□□□□□ -0.58
SNX8-201ENST00000222990 LINC01554Q52M75 96 aa11.41□□□□□ -0.58
SNX8-201ENST00000222990 PRAC1Q96KF2 57 aa11.4□□□□□ -0.58
SNX8-201ENST00000222990 DMDP11532 3685 aa11.4□□□□□ -0.58
SNX8-201ENST00000222990 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
SNX8-201ENST00000222990 TENM3Q9P273 2699 aa11.33□□□□□ -0.6
SNX8-201ENST00000222990 CELSR1Q9NYQ6 3014 aa11.32□□□□□ -0.6
SNX8-201ENST00000222990 KRTAP13-2Q52LG2 175 aa11.31□□□□□ -0.6
SNX8-201ENST00000222990 S4R3F8 94 aa11.3□□□□□ -0.6
SNX8-201ENST00000222990 CSAG1Q6PB30 78 aa11.27□□□□□ -0.6
SNX8-201ENST00000222990 Q5VSD8 79 aa11.27□□□□□ -0.61
SNX8-201ENST00000222990 RPS29P62273 56 aaKnown RBP11.22□□□□□ -0.61
SNX8-201ENST00000222990 SMG1Q96Q15 3661 aaKnown RBP11.19□□□□□ -0.62
SNX8-201ENST00000222990 TENM1Q9UKZ4 2725 aa11.19□□□□□ -0.62
SNX8-201ENST00000222990 H1FX-AS1Q4G0G2 97 aa11.17□□□□□ -0.62
SNX8-201ENST00000222990 SPATA8Q6RVD6 105 aa11.17□□□□□ -0.62
SNX8-201ENST00000222990 CSMD1Q96PZ7 3565 aa11.16□□□□□ -0.62
SNX8-201ENST00000222990 PDZD2O15018 2839 aa11.13□□□□□ -0.63
SNX8-201ENST00000222990 RPL37P61927 97 aaKnown RBP11.11□□□□□ -0.63
SNX8-201ENST00000222990 A8MU10 97 aa11.07□□□□□ -0.64
SNX8-201ENST00000222990 A6NN06 94 aa11.07□□□□□ -0.64
SNX8-201ENST00000222990 VWFP04275 2813 aa11.05□□□□□ -0.64
SNX8-201ENST00000222990 CAMK2N1Q7Z7J9 78 aa11.04□□□□□ -0.64
SNX8-201ENST00000222990 SEC61BP60468 96 aaKnown RBP11.01□□□□□ -0.65
SNX8-201ENST00000222990 R4GN34 69 aa11□□□□□ -0.65
SNX8-201ENST00000222990 KRTAP21-3Q3LHN1 58 aa10.99□□□□□ -0.65
SNX8-201ENST00000222990 ROMO1P60602 79 aa10.98□□□□□ -0.65
SNX8-201ENST00000222990 FBN1P35555 2871 aaKnown RBP10.91□□□□□ -0.66
SNX8-201ENST00000222990 KRTAP1-4P0C5Y4 121 aa10.9□□□□□ -0.66
SNX8-201ENST00000222990 SVEP1Q4LDE5 3571 aa10.9□□□□□ -0.67
SNX8-201ENST00000222990 OTOGQ6ZRI0 2925 aa10.89□□□□□ -0.67
SNX8-201ENST00000222990 ADM2Q7Z4H4 148 aa10.87□□□□□ -0.67
SNX8-201ENST00000222990 A8MUU9 505 aa10.86□□□□□ -0.67
SNX8-201ENST00000222990 M0QZ58 72 aa10.84□□□□□ -0.67
SNX8-201ENST00000222990 C20orf166-AS1Q96NR2 134 aa10.83□□□□□ -0.68
SNX8-201ENST00000222990 LUZP6Q538Z0 58 aa10.82□□□□□ -0.68
SNX8-201ENST00000222990 TGP01266 2768 aa10.82□□□□□ -0.68
SNX8-201ENST00000222990 PKD1L1Q8TDX9 2849 aa10.79□□□□□ -0.68
SNX8-201ENST00000222990 TENM2Q9NT68 2774 aa10.78□□□□□ -0.68
SNX8-201ENST00000222990 M0R2T5 61 aa10.78□□□□□ -0.68
SNX8-201ENST00000222990 NBPF19A0A087WUL8 3843 aa10.73□□□□□ -0.69
SNX8-201ENST00000222990 SPENQ96T58 3664 aaKnown RBP10.71□□□□□ -0.69
SNX8-201ENST00000222990 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
SNX8-201ENST00000222990 KRTAP25-1Q3LHN0 102 aa10.67□□□□□ -0.7
SNX8-201ENST00000222990 H3BS24 57 aa10.66□□□□□ -0.7
SNX8-201ENST00000222990 CUBNO60494 3623 aa10.63□□□□□ -0.71
SNX8-201ENST00000222990 BSNQ9UPA5 3926 aa10.55□□□□□ -0.72
SNX8-201ENST00000222990 CSMD2Q7Z408 3487 aa10.55□□□□□ -0.72
SNX8-201ENST00000222990 KRTAP13-3Q3SY46 172 aa10.54□□□□□ -0.72
SNX8-201ENST00000222990 ZFHX3Q15911 3703 aa10.53□□□□□ -0.72
SNX8-201ENST00000222990 ANK3Q12955 4377 aaKnown RBP10.49□□□□□ -0.73
SNX8-201ENST00000222990 XP32Q5T750 250 aa10.46□□□□□ -0.73
SNX8-201ENST00000222990 H0YAA0 97 aa10.41□□□□□ -0.74
SNX8-201ENST00000222990 TRRAPQ9Y4A5 3859 aa10.35□□□□□ -0.75
SNX8-201ENST00000222990 FBN3Q75N90 2809 aa10.33□□□□□ -0.76
SNX8-201ENST00000222990 PLAC4Q8WY50 150 aa10.31□□□□□ -0.76
SNX8-201ENST00000222990 A0A0A0MQY5 61 aa10.26□□□□□ -0.77
SNX8-201ENST00000222990 SRRM2Q9UQ35 2752 aaKnown RBP10.22□□□□□ -0.77
SNX8-201ENST00000222990 A0A1B0GVY2 172 aa10.2□□□□□ -0.78
SNX8-201ENST00000222990 TPRXLQ17RH7 258 aa10.2□□□□□ -0.78
SNX8-201ENST00000222990 MEGF8Q7Z7M0 2845 aa10.17□□□□□ -0.78
SNX8-201ENST00000222990 KRTAP10-8P60410 259 aa10.15□□□□□ -0.78
SNX8-201ENST00000222990 P0C880 135 aa10.1□□□□□ -0.79
SNX8-201ENST00000222990 C10orf95Q9H7T3 257 aa10.09□□□□□ -0.79
SNX8-201ENST00000222990 NDUFAF8A1L188 74 aa10.07□□□□□ -0.8
SNX8-201ENST00000222990 VPS13CQ709C8 3753 aa10.04□□□□□ -0.8
SNX8-201ENST00000222990 TNP1P09430 55 aa10.01□□□□□ -0.81
SNX8-201ENST00000222990 COL7A1Q02388 2944 aa9.94□□□□□ -0.82
SNX8-201ENST00000222990 KRTAP3-1Q9BYR8 98 aa9.94□□□□□ -0.82
SNX8-201ENST00000222990 PP632Q6XCG6 107 aa9.88□□□□□ -0.83
SNX8-201ENST00000222990 ZNF469Q96JG9 3925 aaPredicted RBP9.77□□□□□ -0.85
SNX8-201ENST00000222990 HUWE1Q7Z6Z7 4374 aaKnown RBP9.76□□□□□ -0.85
SNX8-201ENST00000222990 KRTAP12-2P59991 146 aa9.71□□□□□ -0.85
SNX8-201ENST00000222990 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
SNX8-201ENST00000222990 KRTAP10-6P60371 365 aaPredicted RBP9.61□□□□□ -0.87
SNX8-201ENST00000222990 AKAP9Q99996 3911 aa9.56□□□□□ -0.88
SNX8-201ENST00000222990 KRTAP13-4Q3LI77 160 aa9.55□□□□□ -0.88
SNX8-201ENST00000222990 KRTAP10-10P60014 251 aa9.53□□□□□ -0.88
SNX8-201ENST00000222990 KRTAP10-4P60372 401 aaPredicted RBP9.49□□□□□ -0.89
SNX8-201ENST00000222990 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
SNX8-201ENST00000222990 CSMD3Q7Z407 3707 aa9.43□□□□□ -0.9
SNX8-201ENST00000222990 DNAH9Q9NYC9 4486 aa9.38□□□□□ -0.91
SNX8-201ENST00000222990 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
SNX8-201ENST00000222990 KRTAP3-2Q9BYR7 98 aa9.34□□□□□ -0.91
SNX8-201ENST00000222990 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
SNX8-201ENST00000222990 PLECQ15149 4684 aaKnown RBP9.21□□□□□ -0.94
SNX8-201ENST00000222990 DNAH1Q9P2D7 4330 aa9.17□□□□□ -0.94
SNX8-201ENST00000222990 DNHD1Q96M86 4753 aa9.14□□□□□ -0.95
SNX8-201ENST00000222990 DNAH5Q8TE73 4624 aa9.11□□□□□ -0.95
SNX8-201ENST00000222990 DNAH11Q96DT5 4516 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms