RNA–Protein interactions for RNA: ENST00000219400.7

CMC2-201, Transcript of C-X9-C motif containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC2, Length 10,301 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-201ENST00000219400 XIRP2A4UGR9 3374 aa6.35□□□□□ -1.39
CMC2-201ENST00000219400 NIPBLQ6KC79 2804 aaeCLIP6.33□□□□□ -1.4
CMC2-201ENST00000219400 COL12A1Q99715 3063 aa6.29□□□□□ -1.4
CMC2-201ENST00000219400 PRUNE2Q8WUY3 3088 aa6.27□□□□□ -1.4
CMC2-201ENST00000219400 VPS13AQ96RL7 3174 aa6.27□□□□□ -1.41
CMC2-201ENST00000219400 H0YAA0 97 aa6.27□□□□□ -1.41
CMC2-201ENST00000219400 XP32Q5T750 250 aa6.27□□□□□ -1.41
CMC2-201ENST00000219400 CELSR2Q9HCU4 2923 aa6.27□□□□□ -1.41
CMC2-201ENST00000219400 FREM2Q5SZK8 3169 aa6.25□□□□□ -1.41
CMC2-201ENST00000219400 PDZD2O15018 2839 aa6.24□□□□□ -1.41
CMC2-201ENST00000219400 KRTAP13-1Q8IUC0 172 aa6.23□□□□□ -1.41
CMC2-201ENST00000219400 VWFP04275 2813 aa6.22□□□□□ -1.41
CMC2-201ENST00000219400 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
CMC2-201ENST00000219400 DMXL2Q8TDJ6 3036 aa6.22□□□□□ -1.41
CMC2-201ENST00000219400 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.41
CMC2-201ENST00000219400 USP34Q70CQ2 3546 aa6.21□□□□□ -1.42
CMC2-201ENST00000219400 LAMA1P25391 3075 aa6.17□□□□□ -1.42
CMC2-201ENST00000219400 TACC2O95359 2948 aa6.14□□□□□ -1.43
CMC2-201ENST00000219400 REV3LO60673 3130 aa6.13□□□□□ -1.43
CMC2-201ENST00000219400 ZZEF1O43149 2961 aa6.13□□□□□ -1.43
CMC2-201ENST00000219400 ZANQ9Y493 2812 aa6.12□□□□□ -1.43
CMC2-201ENST00000219400 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
CMC2-201ENST00000219400 RANBP2P49792 3224 aaKnown RBP6.11□□□□□ -1.43
CMC2-201ENST00000219400 TENM4Q6N022 2769 aa6.1□□□□□ -1.43
CMC2-201ENST00000219400 DNAH14Q0VDD8 3507 aa6.09□□□□□ -1.43
CMC2-201ENST00000219400 KRTAP7-1Q8IUC3 87 aa6.07□□□□□ -1.44
CMC2-201ENST00000219400 DCHS2Q6V1P9 2916 aa6.07□□□□□ -1.44
CMC2-201ENST00000219400 PKD1L1Q8TDX9 2849 aa6.07□□□□□ -1.44
CMC2-201ENST00000219400 CELSR1Q9NYQ6 3014 aa6.05□□□□□ -1.44
CMC2-201ENST00000219400 CELSR3Q9NYQ7 3312 aa6.03□□□□□ -1.44
CMC2-201ENST00000219400 MKI67P46013 3256 aaKnown RBP6.02□□□□□ -1.45
CMC2-201ENST00000219400 BOD1L1Q8NFC6 3051 aa6.01□□□□□ -1.45
CMC2-201ENST00000219400 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
CMC2-201ENST00000219400 NBEAQ8NFP9 2946 aa5.97□□□□□ -1.45
CMC2-201ENST00000219400 COL6A3P12111 3177 aa5.97□□□□□ -1.45
CMC2-201ENST00000219400 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
CMC2-201ENST00000219400 UNC80Q8N2C7 3258 aa5.96□□□□□ -1.46
CMC2-201ENST00000219400 TENM2Q9NT68 2774 aa5.95□□□□□ -1.46
CMC2-201ENST00000219400 HTTP42858 3142 aa5.95□□□□□ -1.46
CMC2-201ENST00000219400 KRTAP21-3Q3LHN1 58 aa5.94□□□□□ -1.46
CMC2-201ENST00000219400 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
CMC2-201ENST00000219400 ATMQ13315 3056 aa5.91□□□□□ -1.46
CMC2-201ENST00000219400 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
CMC2-201ENST00000219400 ADGRG4Q8IZF6 3080 aa5.91□□□□□ -1.46
CMC2-201ENST00000219400 LAMA3Q16787 3333 aa5.89□□□□□ -1.47
CMC2-201ENST00000219400 SPTBN5Q9NRC6 3674 aaKnown RBP5.88□□□□□ -1.47
CMC2-201ENST00000219400 NBPF19A0A087WUL8 3843 aa5.86□□□□□ -1.47
CMC2-201ENST00000219400 INE1O15225 51 aa5.86□□□□□ -1.47
CMC2-201ENST00000219400 VCANP13611 3396 aa5.86□□□□□ -1.47
CMC2-201ENST00000219400 MXRA5Q9NR99 2828 aa5.86□□□□□ -1.47
CMC2-201ENST00000219400 DMXL1Q9Y485 3027 aa5.84□□□□□ -1.47
CMC2-201ENST00000219400 FBN2P35556 2912 aa5.83□□□□□ -1.48
CMC2-201ENST00000219400 COL7A1Q02388 2944 aa5.82□□□□□ -1.48
CMC2-201ENST00000219400 BRCA2P51587 3418 aa5.81□□□□□ -1.48
CMC2-201ENST00000219400 CFAP47Q6ZTR5 3102 aa5.8□□□□□ -1.48
CMC2-201ENST00000219400 MEGF8Q7Z7M0 2845 aa5.74□□□□□ -1.49
CMC2-201ENST00000219400 ZFHX4Q86UP3 3567 aa5.73□□□□□ -1.49
CMC2-201ENST00000219400 SPEGQ15772 3267 aa5.72□□□□□ -1.49
CMC2-201ENST00000219400 CRCT1Q9UGL9 99 aa5.7□□□□□ -1.5
CMC2-201ENST00000219400 HRNRQ86YZ3 2850 aaPredicted RBP5.68□□□□□ -1.5
CMC2-201ENST00000219400 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
CMC2-201ENST00000219400 CDH23Q9H251 3354 aa5.68□□□□□ -1.5
CMC2-201ENST00000219400 SZT2Q5T011 3432 aa5.65□□□□□ -1.51
CMC2-201ENST00000219400 DMDP11532 3685 aa5.62□□□□□ -1.51
CMC2-201ENST00000219400 ZFHX3Q15911 3703 aa5.58□□□□□ -1.52
CMC2-201ENST00000219400 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
CMC2-201ENST00000219400 WDFY3Q8IZQ1 3526 aa5.55□□□□□ -1.52
CMC2-201ENST00000219400 MYO15AQ9UKN7 3530 aa5.52□□□□□ -1.53
CMC2-201ENST00000219400 SPENQ96T58 3664 aaKnown RBP5.52□□□□□ -1.53
CMC2-201ENST00000219400 SMG1Q96Q15 3661 aaKnown RBP5.52□□□□□ -1.53
CMC2-201ENST00000219400 KRTAP10-6P60371 365 aaPredicted RBP5.51□□□□□ -1.53
CMC2-201ENST00000219400 LAMA5O15230 3695 aa5.49□□□□□ -1.53
CMC2-201ENST00000219400 ASPMQ8IZT6 3477 aa5.48□□□□□ -1.53
CMC2-201ENST00000219400 EYSQ5T1H1 3165 aa5.39□□□□□ -1.55
CMC2-201ENST00000219400 FBN3Q75N90 2809 aa5.35□□□□□ -1.55
CMC2-201ENST00000219400 FBN1P35555 2871 aaKnown RBP5.35□□□□□ -1.55
CMC2-201ENST00000219400 RELNP78509 3460 aa5.33□□□□□ -1.56
CMC2-201ENST00000219400 LOC400499M0QZD8 3231 aa5.31□□□□□ -1.56
CMC2-201ENST00000219400 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
CMC2-201ENST00000219400 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
CMC2-201ENST00000219400 OTOGQ6ZRI0 2925 aa5.29□□□□□ -1.56
CMC2-201ENST00000219400 VPS13CQ709C8 3753 aa5.29□□□□□ -1.56
CMC2-201ENST00000219400 AKAP9Q99996 3911 aa5.21□□□□□ -1.58
CMC2-201ENST00000219400 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
CMC2-201ENST00000219400 TRRAPQ9Y4A5 3859 aa5.17□□□□□ -1.58
CMC2-201ENST00000219400 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
CMC2-201ENST00000219400 CSMD1Q96PZ7 3565 aa5.13□□□□□ -1.59
CMC2-201ENST00000219400 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
CMC2-201ENST00000219400 CSMD3Q7Z407 3707 aa5.09□□□□□ -1.59
CMC2-201ENST00000219400 LCE3AQ5TA76 89 aa5.09□□□□□ -1.59
CMC2-201ENST00000219400 DCHS1Q96JQ0 3298 aa5.08□□□□□ -1.6
CMC2-201ENST00000219400 BSNQ9UPA5 3926 aa5□□□□□ -1.61
CMC2-201ENST00000219400 LYSTQ99698 3801 aa4.96□□□□□ -1.62
CMC2-201ENST00000219400 MUC3AQ02505 3323 aa4.96□□□□□ -1.62
CMC2-201ENST00000219400 LORP23490 312 aaPredicted RBP4.93□□□□□ -1.62
CMC2-201ENST00000219400 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
CMC2-201ENST00000219400 CUBNO60494 3623 aa4.9□□□□□ -1.62
CMC2-201ENST00000219400 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
CMC2-201ENST00000219400 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
CMC2-201ENST00000219400 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms