RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ADM2Q7Z4H4 148 aa2.52□□□□□ -2.01
CHD9-201ENST00000219084 TENM4Q6N022 2769 aa2.52□□□□□ -2.01
CHD9-201ENST00000219084 HRNRQ86YZ3 2850 aaPredicted RBP2.52□□□□□ -2.01
CHD9-201ENST00000219084 KRTAP10-1P60331 282 aa2.52□□□□□ -2.01
CHD9-201ENST00000219084 USP34Q70CQ2 3546 aa2.51□□□□□ -2.01
CHD9-201ENST00000219084 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
CHD9-201ENST00000219084 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
CHD9-201ENST00000219084 A8MUU9 505 aa2.5□□□□□ -2.01
CHD9-201ENST00000219084 RANBP2P49792 3224 aaKnown RBP2.5□□□□□ -2.01
CHD9-201ENST00000219084 C20orf166-AS1Q96NR2 134 aa2.49□□□□□ -2.01
CHD9-201ENST00000219084 LAMA1P25391 3075 aa2.49□□□□□ -2.01
CHD9-201ENST00000219084 KRTAP10-2P60368 255 aa2.49□□□□□ -2.01
CHD9-201ENST00000219084 WDFY4Q6ZS81 3184 aa2.48□□□□□ -2.01
CHD9-201ENST00000219084 KRTAP7-1Q8IUC3 87 aa2.48□□□□□ -2.01
CHD9-201ENST00000219084 PRUNE2Q8WUY3 3088 aa2.48□□□□□ -2.01
CHD9-201ENST00000219084 ZZEF1O43149 2961 aa2.47□□□□□ -2.01
CHD9-201ENST00000219084 CRYBG3Q68DQ2 2970 aa2.47□□□□□ -2.01
CHD9-201ENST00000219084 KRTAP13-2Q52LG2 175 aa2.45□□□□□ -2.02
CHD9-201ENST00000219084 SPTBN5Q9NRC6 3674 aaKnown RBP2.45□□□□□ -2.02
CHD9-201ENST00000219084 KRTAP11-1Q8IUC1 163 aa2.44□□□□□ -2.02
CHD9-201ENST00000219084 DNAH14Q0VDD8 3507 aa2.44□□□□□ -2.02
CHD9-201ENST00000219084 LAMA3Q16787 3333 aa2.43□□□□□ -2.02
CHD9-201ENST00000219084 BRCA2P51587 3418 aa2.43□□□□□ -2.02
CHD9-201ENST00000219084 TNP1P09430 55 aa2.42□□□□□ -2.02
CHD9-201ENST00000219084 XIRP2A4UGR9 3374 aa2.41□□□□□ -2.02
CHD9-201ENST00000219084 DMXL2Q8TDJ6 3036 aa2.41□□□□□ -2.02
CHD9-201ENST00000219084 CDH23Q9H251 3354 aa2.41□□□□□ -2.02
CHD9-201ENST00000219084 ADGRG4Q8IZF6 3080 aa2.4□□□□□ -2.02
CHD9-201ENST00000219084 BOD1L1Q8NFC6 3051 aa2.39□□□□□ -2.03
CHD9-201ENST00000219084 A8MU10 97 aa2.39□□□□□ -2.03
CHD9-201ENST00000219084 COL12A1Q99715 3063 aa2.39□□□□□ -2.03
CHD9-201ENST00000219084 OTOGQ6ZRI0 2925 aa2.39□□□□□ -2.03
CHD9-201ENST00000219084 DCHS2Q6V1P9 2916 aa2.39□□□□□ -2.03
CHD9-201ENST00000219084 NDUFAF8A1L188 74 aa2.38□□□□□ -2.03
CHD9-201ENST00000219084 FBN2P35556 2912 aa2.37□□□□□ -2.03
CHD9-201ENST00000219084 H0YAA0 97 aa2.37□□□□□ -2.03
CHD9-201ENST00000219084 CELSR3Q9NYQ7 3312 aa2.37□□□□□ -2.03
CHD9-201ENST00000219084 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
CHD9-201ENST00000219084 UNC80Q8N2C7 3258 aa2.36□□□□□ -2.03
CHD9-201ENST00000219084 ATMQ13315 3056 aa2.36□□□□□ -2.03
CHD9-201ENST00000219084 VCANP13611 3396 aa2.36□□□□□ -2.03
CHD9-201ENST00000219084 KRTAP1-4P0C5Y4 121 aa2.36□□□□□ -2.03
CHD9-201ENST00000219084 COL6A3P12111 3177 aa2.35□□□□□ -2.03
CHD9-201ENST00000219084 KRTAP13-3Q3SY46 172 aa2.34□□□□□ -2.03
CHD9-201ENST00000219084 P0C880 135 aa2.34□□□□□ -2.04
CHD9-201ENST00000219084 DMXL1Q9Y485 3027 aa2.33□□□□□ -2.04
CHD9-201ENST00000219084 XP32Q5T750 250 aa2.33□□□□□ -2.04
CHD9-201ENST00000219084 FREM2Q5SZK8 3169 aa2.33□□□□□ -2.04
CHD9-201ENST00000219084 CELSR1Q9NYQ6 3014 aa2.33□□□□□ -2.04
CHD9-201ENST00000219084 REV3LO60673 3130 aa2.32□□□□□ -2.04
CHD9-201ENST00000219084 SZT2Q5T011 3432 aa2.32□□□□□ -2.04
CHD9-201ENST00000219084 C10orf95Q9H7T3 257 aa2.3□□□□□ -2.04
CHD9-201ENST00000219084 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
CHD9-201ENST00000219084 KRTAP23-1A1A580 65 aa2.28□□□□□ -2.04
CHD9-201ENST00000219084 RYR1P21817 5038 aa2.26□□□□□ -2.05
CHD9-201ENST00000219084 EYSQ5T1H1 3165 aa2.26□□□□□ -2.05
CHD9-201ENST00000219084 AKAP9Q99996 3911 aa2.26□□□□□ -2.05
CHD9-201ENST00000219084 SPENQ96T58 3664 aaKnown RBP2.24□□□□□ -2.05
CHD9-201ENST00000219084 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
CHD9-201ENST00000219084 NBPF19A0A087WUL8 3843 aa2.23□□□□□ -2.05
CHD9-201ENST00000219084 COL7A1Q02388 2944 aa2.23□□□□□ -2.05
CHD9-201ENST00000219084 LOC400499M0QZD8 3231 aa2.22□□□□□ -2.05
CHD9-201ENST00000219084 ALMS1Q8TCU4 4167 aa2.21□□□□□ -2.06
CHD9-201ENST00000219084 WDFY3Q8IZQ1 3526 aa2.21□□□□□ -2.06
CHD9-201ENST00000219084 KRTAP10-8P60410 259 aa2.2□□□□□ -2.06
CHD9-201ENST00000219084 CFAP47Q6ZTR5 3102 aa2.2□□□□□ -2.06
CHD9-201ENST00000219084 A0A1B0GVY2 172 aa2.19□□□□□ -2.06
CHD9-201ENST00000219084 ZFHX4Q86UP3 3567 aa2.18□□□□□ -2.06
CHD9-201ENST00000219084 BSNQ9UPA5 3926 aa2.18□□□□□ -2.06
CHD9-201ENST00000219084 KRTAP12-2P59991 146 aa2.18□□□□□ -2.06
CHD9-201ENST00000219084 VPS13CQ709C8 3753 aa2.18□□□□□ -2.06
CHD9-201ENST00000219084 SPEGQ15772 3267 aa2.18□□□□□ -2.06
CHD9-201ENST00000219084 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
CHD9-201ENST00000219084 KRTAP19-4Q3LI73 84 aa2.17□□□□□ -2.06
CHD9-201ENST00000219084 FBN1P35555 2871 aaKnown RBP2.17□□□□□ -2.06
CHD9-201ENST00000219084 MYO15AQ9UKN7 3530 aa2.17□□□□□ -2.06
CHD9-201ENST00000219084 FBN3Q75N90 2809 aa2.17□□□□□ -2.06
CHD9-201ENST00000219084 ASPMQ8IZT6 3477 aa2.16□□□□□ -2.06
CHD9-201ENST00000219084 INE1O15225 51 aa2.16□□□□□ -2.06
CHD9-201ENST00000219084 LAMA5O15230 3695 aa2.16□□□□□ -2.06
CHD9-201ENST00000219084 TRRAPQ9Y4A5 3859 aa2.14□□□□□ -2.07
CHD9-201ENST00000219084 DMDP11532 3685 aa2.14□□□□□ -2.07
CHD9-201ENST00000219084 KRTAP10-10P60014 251 aa2.14□□□□□ -2.07
CHD9-201ENST00000219084 SMG1Q96Q15 3661 aaKnown RBP2.14□□□□□ -2.07
CHD9-201ENST00000219084 CMYA5Q8N3K9 4069 aa2.13□□□□□ -2.07
CHD9-201ENST00000219084 KRTAP3-1Q9BYR8 98 aa2.11□□□□□ -2.07
CHD9-201ENST00000219084 CSMD1Q96PZ7 3565 aa2.1□□□□□ -2.07
CHD9-201ENST00000219084 KRTAP10-6P60371 365 aaPredicted RBP2.1□□□□□ -2.07
CHD9-201ENST00000219084 KRTAP15-1Q3LI76 137 aa2.09□□□□□ -2.07
CHD9-201ENST00000219084 DNAH3Q8TD57 4116 aa2.09□□□□□ -2.07
CHD9-201ENST00000219084 DNAH7Q8WXX0 4024 aa2.06□□□□□ -2.08
CHD9-201ENST00000219084 RELNP78509 3460 aa2.06□□□□□ -2.08
CHD9-201ENST00000219084 MUC3AQ02505 3323 aa2.06□□□□□ -2.08
CHD9-201ENST00000219084 DCHS1Q96JQ0 3298 aa2.05□□□□□ -2.08
CHD9-201ENST00000219084 HECTD4Q9Y4D8 3996 aa2.04□□□□□ -2.08
CHD9-201ENST00000219084 DNAH6Q9C0G6 4158 aa2.03□□□□□ -2.08
CHD9-201ENST00000219084 SPRR5A0A1B0GTR4 108 aa2.03□□□□□ -2.08
CHD9-201ENST00000219084 KRTAP3-2Q9BYR7 98 aa2.02□□□□□ -2.09
CHD9-201ENST00000219084 KRTAP3-3Q9BYR6 98 aa2.02□□□□□ -2.09
CHD9-201ENST00000219084 LYSTQ99698 3801 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms