RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ZZEF1O43149 2961 aa8.4□□□□□ -1.06
SPTLC2-201ENST00000216484 VCANP13611 3396 aa8.4□□□□□ -1.06
SPTLC2-201ENST00000216484 CHD9Q3L8U1 2897 aa8.4□□□□□ -1.07
SPTLC2-201ENST00000216484 USP34Q70CQ2 3546 aa8.39□□□□□ -1.07
SPTLC2-201ENST00000216484 NOTCH2NLQ7Z3S9 236 aa8.36□□□□□ -1.07
SPTLC2-201ENST00000216484 SZT2Q5T011 3432 aa8.35□□□□□ -1.07
SPTLC2-201ENST00000216484 KRTAP29-1A8MX34 341 aaPredicted RBP8.34□□□□□ -1.07
SPTLC2-201ENST00000216484 LCE6AA0A183 80 aa8.28□□□□□ -1.08
SPTLC2-201ENST00000216484 DMXL1Q9Y485 3027 aa8.25□□□□□ -1.09
SPTLC2-201ENST00000216484 KRTAP4-16G5E9R7 235 aaPredicted RBP8.23□□□□□ -1.09
SPTLC2-201ENST00000216484 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
SPTLC2-201ENST00000216484 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
SPTLC2-201ENST00000216484 WDFY3Q8IZQ1 3526 aa8.22□□□□□ -1.09
SPTLC2-201ENST00000216484 P0C880 135 aa8.21□□□□□ -1.1
SPTLC2-201ENST00000216484 ADGRG4Q8IZF6 3080 aa8.2□□□□□ -1.1
SPTLC2-201ENST00000216484 TACC2O95359 2948 aa8.2□□□□□ -1.1
SPTLC2-201ENST00000216484 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
SPTLC2-201ENST00000216484 PP632Q6XCG6 107 aa8.16□□□□□ -1.1
SPTLC2-201ENST00000216484 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
SPTLC2-201ENST00000216484 TNRC18O15417 2968 aaPredicted RBP8.14□□□□□ -1.11
SPTLC2-201ENST00000216484 ASPMQ8IZT6 3477 aa8.14□□□□□ -1.11
SPTLC2-201ENST00000216484 MYO15AQ9UKN7 3530 aa8.14□□□□□ -1.11
SPTLC2-201ENST00000216484 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
SPTLC2-201ENST00000216484 CELSR1Q9NYQ6 3014 aa8.1□□□□□ -1.11
SPTLC2-201ENST00000216484 NBEAQ8NFP9 2946 aa8.09□□□□□ -1.11
SPTLC2-201ENST00000216484 CELSR2Q9HCU4 2923 aa8.08□□□□□ -1.12
SPTLC2-201ENST00000216484 SPTBN5Q9NRC6 3674 aaKnown RBP8.08□□□□□ -1.12
SPTLC2-201ENST00000216484 ZFHX4Q86UP3 3567 aa8.05□□□□□ -1.12
SPTLC2-201ENST00000216484 NF1P21359 2839 aa8.04□□□□□ -1.12
SPTLC2-201ENST00000216484 LOC400499M0QZD8 3231 aa8.03□□□□□ -1.12
SPTLC2-201ENST00000216484 TENM3Q9P273 2699 aa8.01□□□□□ -1.13
SPTLC2-201ENST00000216484 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
SPTLC2-201ENST00000216484 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
SPTLC2-201ENST00000216484 LAMA5O15230 3695 aa7.96□□□□□ -1.13
SPTLC2-201ENST00000216484 NIPBLQ6KC79 2804 aaeCLIP7.96□□□□□ -1.14
SPTLC2-201ENST00000216484 DCHS1Q96JQ0 3298 aa7.95□□□□□ -1.14
SPTLC2-201ENST00000216484 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
SPTLC2-201ENST00000216484 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
SPTLC2-201ENST00000216484 FLNCQ14315 2725 aa7.91□□□□□ -1.14
SPTLC2-201ENST00000216484 TGP01266 2768 aa7.9□□□□□ -1.14
SPTLC2-201ENST00000216484 NBPF19A0A087WUL8 3843 aa7.9□□□□□ -1.15
SPTLC2-201ENST00000216484 H0YAA0 97 aa7.87□□□□□ -1.15
SPTLC2-201ENST00000216484 PDZD2O15018 2839 aa7.86□□□□□ -1.15
SPTLC2-201ENST00000216484 EYSQ5T1H1 3165 aa7.84□□□□□ -1.15
SPTLC2-201ENST00000216484 KRTAP10-10P60014 251 aa7.81□□□□□ -1.16
SPTLC2-201ENST00000216484 DCHS2Q6V1P9 2916 aa7.79□□□□□ -1.16
SPTLC2-201ENST00000216484 RELNP78509 3460 aa7.79□□□□□ -1.16
SPTLC2-201ENST00000216484 SRRM2Q9UQ35 2752 aaKnown RBP7.77□□□□□ -1.17
SPTLC2-201ENST00000216484 KRTAP7-1Q8IUC3 87 aa7.76□□□□□ -1.17
SPTLC2-201ENST00000216484 KRTAP13-1Q8IUC0 172 aa7.74□□□□□ -1.17
SPTLC2-201ENST00000216484 CSMD1Q96PZ7 3565 aa7.69□□□□□ -1.18
SPTLC2-201ENST00000216484 XP32Q5T750 250 aa7.67□□□□□ -1.18
SPTLC2-201ENST00000216484 SPENQ96T58 3664 aaKnown RBP7.67□□□□□ -1.18
SPTLC2-201ENST00000216484 VWFP04275 2813 aa7.65□□□□□ -1.19
SPTLC2-201ENST00000216484 FBN2P35556 2912 aa7.64□□□□□ -1.19
SPTLC2-201ENST00000216484 SMG1Q96Q15 3661 aaKnown RBP7.64□□□□□ -1.19
SPTLC2-201ENST00000216484 ZANQ9Y493 2812 aa7.63□□□□□ -1.19
SPTLC2-201ENST00000216484 PKD1L1Q8TDX9 2849 aa7.58□□□□□ -1.2
SPTLC2-201ENST00000216484 DMDP11532 3685 aa7.54□□□□□ -1.2
SPTLC2-201ENST00000216484 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
SPTLC2-201ENST00000216484 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
SPTLC2-201ENST00000216484 TENM4Q6N022 2769 aa7.44□□□□□ -1.22
SPTLC2-201ENST00000216484 MXRA5Q9NR99 2828 aa7.42□□□□□ -1.22
SPTLC2-201ENST00000216484 CUBNO60494 3623 aa7.4□□□□□ -1.22
SPTLC2-201ENST00000216484 ZFHX3Q15911 3703 aa7.38□□□□□ -1.23
SPTLC2-201ENST00000216484 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
SPTLC2-201ENST00000216484 TENM2Q9NT68 2774 aa7.36□□□□□ -1.23
SPTLC2-201ENST00000216484 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
SPTLC2-201ENST00000216484 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
SPTLC2-201ENST00000216484 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
SPTLC2-201ENST00000216484 MEGF8Q7Z7M0 2845 aa7.27□□□□□ -1.25
SPTLC2-201ENST00000216484 KRTAP13-3Q3SY46 172 aa7.25□□□□□ -1.25
SPTLC2-201ENST00000216484 HRNRQ86YZ3 2850 aaPredicted RBP7.2□□□□□ -1.26
SPTLC2-201ENST00000216484 SVEP1Q4LDE5 3571 aa7.17□□□□□ -1.26
SPTLC2-201ENST00000216484 KRTAP12-1P59990 96 aa7.14□□□□□ -1.27
SPTLC2-201ENST00000216484 INE1O15225 51 aa7.1□□□□□ -1.27
SPTLC2-201ENST00000216484 VPS13CQ709C8 3753 aa7.08□□□□□ -1.28
SPTLC2-201ENST00000216484 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
SPTLC2-201ENST00000216484 OTOGQ6ZRI0 2925 aa7.04□□□□□ -1.28
SPTLC2-201ENST00000216484 CSMD3Q7Z407 3707 aa7.04□□□□□ -1.28
SPTLC2-201ENST00000216484 MUC3AQ02505 3323 aa7.01□□□□□ -1.29
SPTLC2-201ENST00000216484 KRTAP21-3Q3LHN1 58 aa6.99□□□□□ -1.29
SPTLC2-201ENST00000216484 CSMD2Q7Z408 3487 aa6.96□□□□□ -1.3
SPTLC2-201ENST00000216484 FBN3Q75N90 2809 aa6.9□□□□□ -1.3
SPTLC2-201ENST00000216484 TRRAPQ9Y4A5 3859 aa6.89□□□□□ -1.31
SPTLC2-201ENST00000216484 AKAP9Q99996 3911 aa6.81□□□□□ -1.32
SPTLC2-201ENST00000216484 FBN1P35555 2871 aaKnown RBP6.8□□□□□ -1.32
SPTLC2-201ENST00000216484 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
SPTLC2-201ENST00000216484 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
SPTLC2-201ENST00000216484 KRTAP10-6P60371 365 aaPredicted RBP6.59□□□□□ -1.35
SPTLC2-201ENST00000216484 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
SPTLC2-201ENST00000216484 BSNQ9UPA5 3926 aa6.54□□□□□ -1.36
SPTLC2-201ENST00000216484 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
SPTLC2-201ENST00000216484 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
SPTLC2-201ENST00000216484 ALMS1Q8TCU4 4167 aa6.26□□□□□ -1.41
SPTLC2-201ENST00000216484 LYSTQ99698 3801 aa6.23□□□□□ -1.41
SPTLC2-201ENST00000216484 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
SPTLC2-201ENST00000216484 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
SPTLC2-201ENST00000216484 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
SPTLC2-201ENST00000216484 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms