RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 MRPL34Q9BQ48 92 aaKnown RBP12.05□□□□□ -0.48
RCN1-201ENST00000054950 IGLV5-52A0A0A0MRZ9 124 aa12.04□□□□□ -0.48
RCN1-201ENST00000054950 LCA10Q71F78 164 aa12.04□□□□□ -0.48
RCN1-201ENST00000054950 A6NED7 52 aa12.02□□□□□ -0.48
RCN1-201ENST00000054950 RTL8CO15255 209 aa12.02□□□□□ -0.48
RCN1-201ENST00000054950 SPTSSBQ8NFR3 76 aa12.02□□□□□ -0.48
RCN1-201ENST00000054950 Q75L30 129 aa12.01□□□□□ -0.49
RCN1-201ENST00000054950 FBN3Q75N90 2809 aa12.01□□□□□ -0.49
RCN1-201ENST00000054950 HRES1P13985 223 aa12□□□□□ -0.49
RCN1-201ENST00000054950 ZNF706Q9Y5V0 76 aaPredicted RBP12□□□□□ -0.49
RCN1-201ENST00000054950 PRKDCP78527 4128 aaKnown RBP11.99□□□□□ -0.49
RCN1-201ENST00000054950 LOC101927531A0A1B0GV80 90 aa11.99□□□□□ -0.49
RCN1-201ENST00000054950 NUPR2A6NF83 97 aa11.99□□□□□ -0.49
RCN1-201ENST00000054950 ZNF861PO60384 105 aa11.98□□□□□ -0.49
RCN1-201ENST00000054950 SEC61GP60059 68 aa11.97□□□□□ -0.49
RCN1-201ENST00000054950 Q5W150 140 aa11.97□□□□□ -0.49
RCN1-201ENST00000054950 TGP01266 2768 aa11.95□□□□□ -0.5
RCN1-201ENST00000054950 ALMS1Q8TCU4 4167 aa11.93□□□□□ -0.5
RCN1-201ENST00000054950 CIRBP-AS1Q8TBR5 109 aa11.93□□□□□ -0.5
RCN1-201ENST00000054950 PLAC8Q9NZF1 115 aa11.91□□□□□ -0.5
RCN1-201ENST00000054950 LINC01558Q9Y6Z2 57 aa11.91□□□□□ -0.5
RCN1-201ENST00000054950 MEGF8Q7Z7M0 2845 aa11.91□□□□□ -0.5
RCN1-201ENST00000054950 DNAH6Q9C0G6 4158 aa11.91□□□□□ -0.5
RCN1-201ENST00000054950 PRR26Q8N8Z3 221 aa11.88□□□□□ -0.51
RCN1-201ENST00000054950 SPINK7P58062 85 aa11.87□□□□□ -0.51
RCN1-201ENST00000054950 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
RCN1-201ENST00000054950 KRTAP13-3Q3SY46 172 aa11.85□□□□□ -0.51
RCN1-201ENST00000054950 RETNLBQ9BQ08 111 aa11.83□□□□□ -0.52
RCN1-201ENST00000054950 CDC42SE1Q9NRR8 79 aa11.83□□□□□ -0.52
RCN1-201ENST00000054950 IGLV7-43P04211 117 aa11.82□□□□□ -0.52
RCN1-201ENST00000054950 ATP11AUNQ6ZP68 121 aa11.82□□□□□ -0.52
RCN1-201ENST00000054950 DNAH5Q8TE73 4624 aa11.78□□□□□ -0.52
RCN1-201ENST00000054950 A6NN06 94 aa11.76□□□□□ -0.53
RCN1-201ENST00000054950 KTN1-AS1Q86SY8 53 aa11.75□□□□□ -0.53
RCN1-201ENST00000054950 C1orf134Q5TEV5 83 aa11.69□□□□□ -0.54
RCN1-201ENST00000054950 ACYP2P14621 99 aa11.67□□□□□ -0.54
RCN1-201ENST00000054950 LRP1BQ9NZR2 4599 aa11.66□□□□□ -0.54
RCN1-201ENST00000054950 LINC00313P59037 77 aa11.66□□□□□ -0.54
RCN1-201ENST00000054950 KRTAP10-2P60368 255 aa11.65□□□□□ -0.55
RCN1-201ENST00000054950 C8orf87E5RJ46 101 aa11.64□□□□□ -0.55
RCN1-201ENST00000054950 SSBP3-AS1Q7Z2R9 100 aa11.64□□□□□ -0.55
RCN1-201ENST00000054950 KRTAP13-2Q52LG2 175 aa11.64□□□□□ -0.55
RCN1-201ENST00000054950 LY6G6CO95867 125 aa11.62□□□□□ -0.55
RCN1-201ENST00000054950 DMAC1Q96GE9 116 aa11.62□□□□□ -0.55
RCN1-201ENST00000054950 RBM12B-AS1Q9P1G2 102 aa11.6□□□□□ -0.55
RCN1-201ENST00000054950 FAM229AH3BQW9 127 aa11.57□□□□□ -0.56
RCN1-201ENST00000054950 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
RCN1-201ENST00000054950 C7orf65Q6ZTY9 151 aa11.53□□□□□ -0.56
RCN1-201ENST00000054950 KRTAP16-1A8MUX0 517 aa11.52□□□□□ -0.56
RCN1-201ENST00000054950 HYDINQ4G0P3 5121 aa11.52□□□□□ -0.57
RCN1-201ENST00000054950 PKD1P98161 4303 aa11.52□□□□□ -0.57
RCN1-201ENST00000054950 DNHD1Q96M86 4753 aa11.51□□□□□ -0.57
RCN1-201ENST00000054950 VPS13BQ7Z7G8 4022 aa11.51□□□□□ -0.57
RCN1-201ENST00000054950 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
RCN1-201ENST00000054950 A0A1B0GU69 56 aa11.49□□□□□ -0.57
RCN1-201ENST00000054950 KRTAP10-1P60331 282 aa11.47□□□□□ -0.57
RCN1-201ENST00000054950 FAT2Q9NYQ8 4349 aa11.44□□□□□ -0.58
RCN1-201ENST00000054950 KRTAP1-4P0C5Y4 121 aa11.42□□□□□ -0.58
RCN1-201ENST00000054950 PRAC1Q96KF2 57 aa11.4□□□□□ -0.58
RCN1-201ENST00000054950 ADM2Q7Z4H4 148 aa11.39□□□□□ -0.59
RCN1-201ENST00000054950 Q6ZSA8 131 aa11.35□□□□□ -0.59
RCN1-201ENST00000054950 SPINK1P00995 79 aa11.31□□□□□ -0.6
RCN1-201ENST00000054950 SPATA8Q6RVD6 105 aa11.31□□□□□ -0.6
RCN1-201ENST00000054950 PLA2G1BP04054 148 aaKnown RBP11.3□□□□□ -0.6
RCN1-201ENST00000054950 MIR22HGQ0VDD5 57 aa11.29□□□□□ -0.6
RCN1-201ENST00000054950 Q8N1X5 172 aa11.29□□□□□ -0.6
RCN1-201ENST00000054950 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.6
RCN1-201ENST00000054950 C4orf48Q5BLP8 95 aa11.27□□□□□ -0.61
RCN1-201ENST00000054950 UQCR11O14957 56 aa11.26□□□□□ -0.61
RCN1-201ENST00000054950 PKHD1P08F94 4074 aa11.25□□□□□ -0.61
RCN1-201ENST00000054950 C9orf92A6NGG3 77 aa11.1□□□□□ -0.63
RCN1-201ENST00000054950 LINC00304Q8N9R0 145 aa11.09□□□□□ -0.63
RCN1-201ENST00000054950 SACSQ9NZJ4 4579 aa11.05□□□□□ -0.64
RCN1-201ENST00000054950 FAT1Q14517 4588 aa11.04□□□□□ -0.64
RCN1-201ENST00000054950 SMR3BP02814 79 aaPredicted RBP11.04□□□□□ -0.64
RCN1-201ENST00000054950 DYNC1H1Q14204 4646 aaKnown RBP11□□□□□ -0.65
RCN1-201ENST00000054950 CSAG1Q6PB30 78 aa10.97□□□□□ -0.65
RCN1-201ENST00000054950 KRTAP3-1Q9BYR8 98 aa10.96□□□□□ -0.65
RCN1-201ENST00000054950 H0YAA0 97 aa10.95□□□□□ -0.66
RCN1-201ENST00000054950 LINC01554Q52M75 96 aa10.93□□□□□ -0.66
RCN1-201ENST00000054950 PKHD1L1Q86WI1 4243 aa10.93□□□□□ -0.66
RCN1-201ENST00000054950 A8MUU9 505 aa10.88□□□□□ -0.67
RCN1-201ENST00000054950 RPS29P62273 56 aaKnown RBP10.88□□□□□ -0.67
RCN1-201ENST00000054950 APOBP04114 4563 aaKnown RBP10.88□□□□□ -0.67
RCN1-201ENST00000054950 C20orf166-AS1Q96NR2 134 aa10.87□□□□□ -0.67
RCN1-201ENST00000054950 A0A1B0GU33 70 aa10.8□□□□□ -0.68
RCN1-201ENST00000054950 KRTAP21-3Q3LHN1 58 aa10.78□□□□□ -0.68
RCN1-201ENST00000054950 H1FX-AS1Q4G0G2 97 aa10.75□□□□□ -0.69
RCN1-201ENST00000054950 KRTAP10-4P60372 401 aaPredicted RBP10.73□□□□□ -0.69
RCN1-201ENST00000054950 FLG2Q5D862 2391 aaPredicted RBP10.71□□□□□ -0.7
RCN1-201ENST00000054950 LRP1Q07954 4544 aaKnown RBP10.65□□□□□ -0.71
RCN1-201ENST00000054950 COX6B2Q6YFQ2 88 aa10.63□□□□□ -0.71
RCN1-201ENST00000054950 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
RCN1-201ENST00000054950 HSPG2P98160 4391 aa10.61□□□□□ -0.71
RCN1-201ENST00000054950 CRIPTQ9P021 101 aa10.61□□□□□ -0.71
RCN1-201ENST00000054950 A0A1B0GVY2 172 aa10.6□□□□□ -0.71
RCN1-201ENST00000054950 KRTAP25-1Q3LHN0 102 aa10.56□□□□□ -0.72
RCN1-201ENST00000054950 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
RCN1-201ENST00000054950 TNXBP22105 4242 aa10.54□□□□□ -0.72
RCN1-201ENST00000054950 MYCBP2O75592 4640 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms