RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Spg11Q3UHA3 2430 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Tstd1E9PY03 133 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Rasl11bQ922H7 247 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 P01736 120 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Tpsab1Q02844 273 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm11444F6QMA6 170 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Dlx6P70397 175 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Tcf15Q60756 195 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Ifitm10Q8BR26 201 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 ChodlQ9CXM0 273 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Tomm40Q9QYA2 361 aa10.2□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Sptbn4E9PX29 2561 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Ighv8-8A0A0A6YXQ0 119 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm6871L7N248 545 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 1700001C19RikQ8K168 210 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Fancd2osQ9D4K4 178 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Osr1Q9WVG7 266 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Ighv1-62-2A0A0A6YXZ4 119 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Trav7-5A0A0G2JFX6 112 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 AdipoqQ60994 247 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 BC106179Q8C9L1 186 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Mrpl53Q9D1H8 118 aaKnown RBP10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Trav14-3A0A075B607 120 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Smad7O35253 426 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Q08AU9 97 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Tmem219Q9D123 240 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Arhgef17Q80U35 2057 aa10.19□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Trbv17A0A140T8P8 114 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Ca2P00920 260 aaKnown RBP10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Olfr745Q7TRL9 328 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Olfr553Q7TRS6 326 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Trdv1A0A075B657 112 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 RhogP84096 191 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Pygo2Q80V76 405 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Anapc13Q8R034 74 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Igkv14-130A0A0G2JF45 117 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Oxld1Q9CR10 201 aa10.18□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Cox8bP48772 70 aa10.17□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Necap2Q9D1J1 266 aa10.17□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm35549A0A0N4SUS7 141 aa10.17□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm6034E9Q101 117 aa10.17□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Ndufa2Q9CQ75 99 aa10.17□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Tnfrsf23Q9ER63 176 aa10.17□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm20379A0A087WR34 119 aa10.17□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Muc15Q8C6Z1 331 aa10.17□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Trav6n-6A0A075B6B2 114 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm17359A0A0G2JEB7 487 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Ighv1-69A0A0G2JFS5 117 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm6812B1AXU1 112 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 1700020N15RikL7MTX3 112 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 P01801 115 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Dmrtc2Q8CGW9 370 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Chac1Q8R3J5 223 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gkn1Q9CR36 201 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Pla2g2eQ9QUL3 142 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Trav16d-dv11A0A075B617 117 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm17660B9UIU9 90 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Spock3Q8BKV0 436 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Znhit3Q9CQK1 151 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gtsf1lQ9CWD0 151 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Lypd8Q9D7S0 255 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 H2-DMb1P35737 261 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Crip1P63254 77 aa10.16□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Bak1O08734 209 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm9949Q8C9F4 104 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm4763Q8CFJ5 196 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Ly6lH3BJG9 140 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Gm26727M0QWT1 121 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 P01794 123 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 CstadQ9D245 104 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 eef1akmt3D3YWP0 232 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Cited2O35740 269 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Prss41Q920S2 322 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 4930412O13RikQ9D5M9 106 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Q9DAZ5 108 aa10.15□□□□□ -0.78
Clcn3-201ENSMUST00000004430 Trav6d-7A0A075B6B0 112 aa10.15□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Pear1Q8VIK5 1034 aa10.15□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Tmem52Q9D702 196 aa10.15□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Igkv4-90A0A075B5L3 117 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Ighv1-81A0A075B5Y4 117 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Trav6-6A0A075B603 114 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Trav19A0A0B4J1K4 119 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Gm15080A2BI02 449 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Thy1P01831 162 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Tmem129Q8K304 362 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Pkd1l2Q7TN88 2461 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Ighv1-39A0A075B5V5 117 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 PlnP61014 52 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 MycbQ6P8Z1 170 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Bod1lE9Q6J5 3032 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Lypd6Q8BPP5 171 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Mrpl36Q99N90 102 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Spata45Q9CVW4 97 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 IcosQ9WVS0 200 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Myo15aQ9QZZ4 3511 aa10.14□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Gm10775Q3V290 127 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Gm1553Q66VB7 94 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Gm9944Q8C559 102 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 AamdcQ8R0P4 122 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Tmem95P0DJF3 176 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 121.4 ms