RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CD163L1Q9NR16 1453 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 NBPF19A0A087WUL8 3843 aa-0.18□□□□□ -2.44
HMGB1P33-201ENST00000563485 ANKRD50Q9ULJ7 1429 aa-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 SPG11Q96JI7 2443 aa-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 IFI6P09912 130 aa-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 IFI27P40305 119 aaPredicted RBP-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 BVES-AS1Q5T3Y7 98 aa-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 C4AP0C0L4 1744 aa-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 C4BP0C0L5 1744 aa-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 LAMA5O15230 3695 aa-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 SONP18583 2426 aaKnown RBP-0.19□□□□□ -2.44
HMGB1P33-201ENST00000563485 FAT3Q8TDW7 4589 aa-0.2□□□□□ -2.44
HMGB1P33-201ENST00000563485 BPTFQ12830 3046 aa-0.2□□□□□ -2.44
HMGB1P33-201ENST00000563485 NEBP20929 6669 aa-0.2□□□□□ -2.44
HMGB1P33-201ENST00000563485 LYNX1G3V0Z9 82 aa-0.2□□□□□ -2.44
HMGB1P33-201ENST00000563485 SPRR2EP22531 72 aa-0.2□□□□□ -2.44
HMGB1P33-201ENST00000563485 THOC2Q8NI27 1593 aaKnown RBP-0.2□□□□□ -2.44
HMGB1P33-201ENST00000563485 VPS13BQ7Z7G8 4022 aa-0.21□□□□□ -2.44
HMGB1P33-201ENST00000563485 MXRA5Q9NR99 2828 aa-0.21□□□□□ -2.44
HMGB1P33-201ENST00000563485 KRTAP6-2Q3LI66 62 aa-0.21□□□□□ -2.44
HMGB1P33-201ENST00000563485 PRO3102Q9H379 93 aa-0.21□□□□□ -2.44
HMGB1P33-201ENST00000563485 HTTP42858 3142 aa-0.21□□□□□ -2.44
HMGB1P33-201ENST00000563485 ANKARQ7Z5J8 1434 aa-0.21□□□□□ -2.44
HMGB1P33-201ENST00000563485 RRBP1Q9P2E9 1410 aaKnown RBP-0.21□□□□□ -2.44
HMGB1P33-201ENST00000563485 KMT2CQ8NEZ4 4911 aaKnown RBP-0.22□□□□□ -2.44
HMGB1P33-201ENST00000563485 SPTBN4Q9H254 2564 aa-0.22□□□□□ -2.44
HMGB1P33-201ENST00000563485 H3BUT2 72 aa-0.22□□□□□ -2.44
HMGB1P33-201ENST00000563485 NREPQ16612 68 aa-0.22□□□□□ -2.44
HMGB1P33-201ENST00000563485 C18orf32Q8TCD1 76 aa-0.22□□□□□ -2.44
HMGB1P33-201ENST00000563485 CFAP43Q8NDM7 1665 aa-0.22□□□□□ -2.44
HMGB1P33-201ENST00000563485 ABCA8O94911 1581 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 TACC2O95359 2948 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 VPS13DQ5THJ4 4388 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 TEP1Q99973 2627 aaKnown RBP-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 PKHD1L1Q86WI1 4243 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 DEFB131BA0A096LNP1 70 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 H0YAA0 97 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 H0YGG7 62 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 NDUFA4O00483 81 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 LINC00158P58513 81 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 PCLOQ9Y6V0 5065 aa-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 ANK3Q12955 4377 aaKnown RBP-0.23□□□□□ -2.45
HMGB1P33-201ENST00000563485 RNF17Q9BXT8 1623 aaKnown RBP-0.24□□□□□ -2.45
HMGB1P33-201ENST00000563485 MT1AP04731 61 aa-0.24□□□□□ -2.45
HMGB1P33-201ENST00000563485 SMIM13P0DJ93 91 aa-0.24□□□□□ -2.45
HMGB1P33-201ENST00000563485 KCNQ1DNQ9H478 68 aa-0.24□□□□□ -2.45
HMGB1P33-201ENST00000563485 CUBNO60494 3623 aa-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 ANKRD11Q6UB99 2663 aaPredicted RBP-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 HIVEP1P15822 2718 aa-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 FAT1Q14517 4588 aa-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 KRTAP19-7Q3SYF9 63 aa-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 PLCH1Q4KWH8 1693 aa-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 DDX60LQ5H9U9 1706 aaKnown RBP-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 DMXL1Q9Y485 3027 aa-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 HERC1Q15751 4861 aa-0.25□□□□□ -2.45
HMGB1P33-201ENST00000563485 ZC3H13Q5T200 1668 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 APOBP04114 4563 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 RALGAPBQ86X10 1494 aa-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 A0A087WXM4 84 aa-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 C9orf92A6NGG3 77 aa-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 MRPL33O75394 65 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 FASNP49327 2511 aaKnown RBP-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 CEP290O15078 2479 aa-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 PKD1L2Q7Z442 2459 aa-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 FAM186AA6NE01 2351 aa-0.26□□□□□ -2.45
HMGB1P33-201ENST00000563485 ITSN1Q15811 1721 aa-0.27□□□□□ -2.45
HMGB1P33-201ENST00000563485 INO80Q9ULG1 1556 aaPredicted RBP-0.27□□□□□ -2.45
HMGB1P33-201ENST00000563485 MTORP42345 2549 aa-0.27□□□□□ -2.45
HMGB1P33-201ENST00000563485 UBR4Q5T4S7 5183 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 HFM1A2PYH4 1435 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 NBEAQ8NFP9 2946 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 PRLHP81277 87 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 SPRR2FQ96RM1 72 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 RICTORQ6R327 1708 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 SACSQ9NZJ4 4579 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 DNAH11Q96DT5 4516 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 LAMA1P25391 3075 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 LRRK2Q5S007 2527 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 DNAH1Q9P2D7 4330 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 STARD9Q9P2P6 4700 aa-0.28□□□□□ -2.45
HMGB1P33-201ENST00000563485 TJP1Q07157 1748 aa-0.29□□□□□ -2.46
HMGB1P33-201ENST00000563485 NHSQ6T4R5 1651 aa-0.29□□□□□ -2.46
HMGB1P33-201ENST00000563485 DEFB114Q30KQ6 69 aa-0.29□□□□□ -2.46
HMGB1P33-201ENST00000563485 UBL5Q9BZL1 73 aa-0.29□□□□□ -2.46
HMGB1P33-201ENST00000563485 GCN1Q92616 2671 aaKnown RBP-0.29□□□□□ -2.46
HMGB1P33-201ENST00000563485 KALRNO60229 2985 aa-0.29□□□□□ -2.46
HMGB1P33-201ENST00000563485 LMTK2Q8IWU2 1503 aa-0.29□□□□□ -2.46
HMGB1P33-201ENST00000563485 MUC17Q685J3 4493 aa-0.29□□□□□ -2.46
HMGB1P33-201ENST00000563485 PARP4Q9UKK3 1724 aaKnown RBP-0.3□□□□□ -2.46
HMGB1P33-201ENST00000563485 UTP20O75691 2785 aaKnown RBP-0.3□□□□□ -2.46
HMGB1P33-201ENST00000563485 DEFB130BP0DP73 79 aa-0.3□□□□□ -2.46
HMGB1P33-201ENST00000563485 DEFB130AP0DP74 79 aa-0.3□□□□□ -2.46
HMGB1P33-201ENST00000563485 DNAH2Q9P225 4427 aa-0.3□□□□□ -2.46
HMGB1P33-201ENST00000563485 IAPPP10997 89 aa-0.31□□□□□ -2.46
HMGB1P33-201ENST00000563485 ITPR3Q14573 2671 aa-0.31□□□□□ -2.46
HMGB1P33-201ENST00000563485 KIAA0586Q9BVV6 1533 aa-0.32□□□□□ -2.46
HMGB1P33-201ENST00000563485 LRRIQ1Q96JM4 1722 aa-0.32□□□□□ -2.46
HMGB1P33-201ENST00000563485 NBEAL2Q6ZNJ1 2754 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms