RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	IGSF10	Q6WRI0	2623 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	FAT4	Q6V0I7	4981 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	TNXB	P22105	4242 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	STAB1	Q9NY15	2570 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	PRM1	P04553	51 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	KRTAP20-1	Q3LI63	56 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	C3	P01024	1663 aa		0.41	□□□□□ -2.34
KTN1-223	ENST00000555573	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.4	□□□□□ -2.34
KTN1-223	ENST00000555573	DEFB131B	A0A096LNP1	70 aa		0.4	□□□□□ -2.35
KTN1-223	ENST00000555573	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.39	□□□□□ -2.35
KTN1-223	ENST00000555573	CHD8	Q9HCK8	2581 aa		0.39	□□□□□ -2.35
KTN1-223	ENST00000555573		M0R2T5	61 aa		0.38	□□□□□ -2.35
KTN1-223	ENST00000555573	RYR2	Q92736	4967 aa		0.38	□□□□□ -2.35
KTN1-223	ENST00000555573		H0YAA0	97 aa		0.38	□□□□□ -2.35
KTN1-223	ENST00000555573	ABCA6	Q8N139	1617 aa		0.38	□□□□□ -2.35
KTN1-223	ENST00000555573	EP300	Q09472	2414 aa	Predicted RBP	0.37	□□□□□ -2.35
KTN1-223	ENST00000555573	SPTBN4	Q9H254	2564 aa		0.37	□□□□□ -2.35
KTN1-223	ENST00000555573	PDE4DIP	Q5VU43	2346 aa		0.37	□□□□□ -2.35
KTN1-223	ENST00000555573	PRKDC	P78527	4128 aa	Known RBP	0.37	□□□□□ -2.35
KTN1-223	ENST00000555573	KMT2A	Q03164	3969 aa		0.37	□□□□□ -2.35
KTN1-223	ENST00000555573		A0A087WWC5	75 aa		0.36	□□□□□ -2.35
KTN1-223	ENST00000555573	DEFB135	Q30KP9	77 aa		0.36	□□□□□ -2.35
KTN1-223	ENST00000555573	RYR1	P21817	5038 aa		0.36	□□□□□ -2.35
KTN1-223	ENST00000555573	TIAM1	Q13009	1591 aa		0.36	□□□□□ -2.35
KTN1-223	ENST00000555573	ETDC	A0A1B0GVM5	59 aa		0.35	□□□□□ -2.35
KTN1-223	ENST00000555573	AKAP13	Q12802	2813 aa		0.35	□□□□□ -2.35
KTN1-223	ENST00000555573	SETX	Q7Z333	2677 aa	Known RBP	0.35	□□□□□ -2.35
KTN1-223	ENST00000555573	KIAA0586	Q9BVV6	1533 aa		0.35	□□□□□ -2.35
KTN1-223	ENST00000555573	DSP	P15924	2871 aa	Known RBP	0.34	□□□□□ -2.35
KTN1-223	ENST00000555573	BPTF	Q12830	3046 aa		0.33	□□□□□ -2.36
KTN1-223	ENST00000555573	WNK1	Q9H4A3	2382 aa		0.33	□□□□□ -2.36
KTN1-223	ENST00000555573	LINC01549	A6NIU2	74 aa		0.33	□□□□□ -2.36
KTN1-223	ENST00000555573	MYCBP2	O75592	4640 aa		0.33	□□□□□ -2.36
KTN1-223	ENST00000555573	MAP1B	P46821	2468 aa	Known RBP	0.33	□□□□□ -2.36
KTN1-223	ENST00000555573	CRIP1	P50238	77 aa		0.33	□□□□□ -2.36
KTN1-223	ENST00000555573	DEFB114	Q30KQ6	69 aa		0.33	□□□□□ -2.36
KTN1-223	ENST00000555573	S100Z	Q8WXG8	99 aa		0.33	□□□□□ -2.36
KTN1-223	ENST00000555573	DCHS2	Q6V1P9	2916 aa		0.32	□□□□□ -2.36
KTN1-223	ENST00000555573	LYNX1	G3V0Z9	82 aa		0.32	□□□□□ -2.36
KTN1-223	ENST00000555573	IAPP	P10997	89 aa		0.32	□□□□□ -2.36
KTN1-223	ENST00000555573	SPRR2D	P22532	72 aa		0.32	□□□□□ -2.36
KTN1-223	ENST00000555573	ABCC6	O95255	1503 aa		0.32	□□□□□ -2.36
KTN1-223	ENST00000555573	LY75	O60449	1722 aa		0.31	□□□□□ -2.36
KTN1-223	ENST00000555573	PRRC2C	Q9Y520	2896 aa	Known RBP	0.31	□□□□□ -2.36
KTN1-223	ENST00000555573	GLI2	P10070	1586 aa		0.31	□□□□□ -2.36
KTN1-223	ENST00000555573	APC2	O95996	2303 aa		0.3	□□□□□ -2.36
KTN1-223	ENST00000555573		H0YGG7	62 aa		0.3	□□□□□ -2.36
KTN1-223	ENST00000555573	DMBT1	Q9UGM3	2413 aa	Predicted RBP	0.3	□□□□□ -2.36
KTN1-223	ENST00000555573	ALMS1	Q8TCU4	4167 aa		0.29	□□□□□ -2.36
KTN1-223	ENST00000555573	LPA	P08519	4548 aa		0.29	□□□□□ -2.36
KTN1-223	ENST00000555573	KIF1A	Q12756	1690 aa		0.28	□□□□□ -2.36
KTN1-223	ENST00000555573	SFTA3	P0C7M3	94 aa		0.28	□□□□□ -2.36
KTN1-223	ENST00000555573	DEFB130B	P0DP73	79 aa		0.28	□□□□□ -2.36
KTN1-223	ENST00000555573	DEFB130A	P0DP74	79 aa		0.28	□□□□□ -2.36
KTN1-223	ENST00000555573	COL7A1	Q02388	2944 aa		0.28	□□□□□ -2.36
KTN1-223	ENST00000555573	ABCA10	Q8WWZ4	1543 aa		0.28	□□□□□ -2.36
KTN1-223	ENST00000555573	RNF213	Q63HN8	5207 aa		0.28	□□□□□ -2.36
KTN1-223	ENST00000555573	ANKRD36C	Q5JPF3	1778 aa		0.28	□□□□□ -2.37
KTN1-223	ENST00000555573	ALS2	Q96Q42	1657 aa		0.28	□□□□□ -2.37
KTN1-223	ENST00000555573	ITSN2	Q9NZM3	1697 aa		0.28	□□□□□ -2.37
KTN1-223	ENST00000555573	NSD1	Q96L73	2696 aa	Predicted RBP	0.27	□□□□□ -2.37
KTN1-223	ENST00000555573	TNRC18	O15417	2968 aa	Predicted RBP	0.27	□□□□□ -2.37
KTN1-223	ENST00000555573	ACAN	P16112	2415 aa		0.26	□□□□□ -2.37
KTN1-223	ENST00000555573	SON	P18583	2426 aa	Known RBP	0.26	□□□□□ -2.37
KTN1-223	ENST00000555573	HECTD1	Q9ULT8	2610 aa		0.26	□□□□□ -2.37
KTN1-223	ENST00000555573	FLNC	Q14315	2725 aa		0.26	□□□□□ -2.37
KTN1-223	ENST00000555573	SMIM5	Q71RC9	77 aa		0.25	□□□□□ -2.37
KTN1-223	ENST00000555573	NBAS	A2RRP1	2371 aa		0.25	□□□□□ -2.37
KTN1-223	ENST00000555573	HECTD4	Q9Y4D8	3996 aa		0.25	□□□□□ -2.37
KTN1-223	ENST00000555573	RYR3	Q15413	4870 aa		0.25	□□□□□ -2.37
KTN1-223	ENST00000555573	MINOS1	Q5TGZ0	78 aa		0.24	□□□□□ -2.37
KTN1-223	ENST00000555573	CROCC2	H7BZ55	1655 aa		0.24	□□□□□ -2.37
KTN1-223	ENST00000555573	CREBBP	Q92793	2442 aa		0.24	□□□□□ -2.37
KTN1-223	ENST00000555573	UGGT1	Q9NYU2	1555 aa		0.23	□□□□□ -2.37
KTN1-223	ENST00000555573	PCNX1	Q96RV3	2341 aa		0.23	□□□□□ -2.37
KTN1-223	ENST00000555573	HMCN2	Q8NDA2	5059 aa		0.23	□□□□□ -2.37
KTN1-223	ENST00000555573	PRX	Q9BXM0	1461 aa		0.23	□□□□□ -2.37
KTN1-223	ENST00000555573	FLNB	O75369	2602 aa	Known RBP	0.23	□□□□□ -2.37
KTN1-223	ENST00000555573	NCBP2-AS2	Q69YL0	99 aa		0.23	□□□□□ -2.37
KTN1-223	ENST00000555573	HSPG2	P98160	4391 aa		0.22	□□□□□ -2.37
KTN1-223	ENST00000555573	CDC42BPA	Q5VT25	1732 aa		0.22	□□□□□ -2.37
KTN1-223	ENST00000555573	TOGARAM1	Q9Y4F4	1720 aa		0.22	□□□□□ -2.37
KTN1-223	ENST00000555573		K7EMI3	77 aa		0.21	□□□□□ -2.38
KTN1-223	ENST00000555573		M0R1W7	72 aa		0.21	□□□□□ -2.38
KTN1-223	ENST00000555573	FCER1G	P30273	86 aa		0.21	□□□□□ -2.38
KTN1-223	ENST00000555573	SPRR2B	P35325	72 aa		0.21	□□□□□ -2.38
KTN1-223	ENST00000555573	CPS1	P31327	1500 aa		0.21	□□□□□ -2.38
KTN1-223	ENST00000555573	MROH2A	A6NES4	1674 aa		0.21	□□□□□ -2.38
KTN1-223	ENST00000555573	FLNA	P21333	2647 aa	Known RBP	0.2	□□□□□ -2.38
KTN1-223	ENST00000555573	TEP1	Q99973	2627 aa	Known RBP	0.2	□□□□□ -2.38
KTN1-223	ENST00000555573	DEFB106A	Q8N104	65 aa		0.2	□□□□□ -2.38
KTN1-223	ENST00000555573	MAST1	Q9Y2H9	1570 aa		0.2	□□□□□ -2.38
KTN1-223	ENST00000555573	TENM2	Q9NT68	2774 aa		0.2	□□□□□ -2.38
KTN1-223	ENST00000555573	C6orf48	Q9UBA6	75 aa		0.19	□□□□□ -2.38
KTN1-223	ENST00000555573	LYST	Q99698	3801 aa		0.19	□□□□□ -2.38
KTN1-223	ENST00000555573	HERC1	Q15751	4861 aa		0.19	□□□□□ -2.38
KTN1-223	ENST00000555573	MUC12	Q9UKN1	5478 aa		0.19	□□□□□ -2.38
KTN1-223	ENST00000555573	ABCA13	Q86UQ4	5058 aa		0.19	□□□□□ -2.38
KTN1-223	ENST00000555573	SERF2	P84101	59 aa		0.18	□□□□□ -2.38
KTN1-223	ENST00000555573	NMES1	Q9C002	83 aa		0.18	□□□□□ -2.38

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