RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.21□□□□□ -1.425e-13■■■■■ 83.1
KTN1-223ENST00000555573 TRA2AQ13595 282 aaKnown RBP eCLIP4.07□□□□□ -1.763e-7■■■■■ 31.7
KTN1-223ENST00000555573 QKIQ96PU8 341 aaKnown RBP eCLIP2.44□□□□□ -2.027e-7■■■■■ 30.1
KTN1-223ENST00000555573 KHSRPQ92945 711 aaKnown RBP eCLIP9.87□□□□□ -0.839e-9■■■■■ 27.2
KTN1-223ENST00000555573 PABPC4Q13310 644 aaKnown RBP eCLIP6.73□□□□□ -1.336e-10■■■■□ 26.2
KTN1-223ENST00000555573 TIAL1Q01085 375 aaKnown RBP eCLIP5.46□□□□□ -1.543e-7■■■■□ 25.7
KTN1-223ENST00000555573 AQRO60306 1485 aaKnown RBP eCLIP2.7□□□□□ -1.983e-6■■■■□ 24.7
KTN1-223ENST00000555573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.58□□□□□ -0.722e-8■■■■□ 23
KTN1-223ENST00000555573 G3BP1Q13283 466 aaKnown RBP eCLIP5.21□□□□□ -1.583e-6■■■■□ 22
KTN1-223ENST00000555573 FXR2P51116 673 aaKnown RBP eCLIP11.28□□□□□ -0.68e-8■■■□□ 15.5
KTN1-223ENST00000555573 AGGF1Q8N302 714 aaeCLIP7.21□□□□□ -1.264e-8■■■□□ 14.9
KTN1-223ENST00000555573 SF3B4Q15427 424 aaKnown RBP eCLIP4.52□□□□□ -1.698e-11■■■□□ 14.9
KTN1-223ENST00000555573 U2AF2P26368 475 aaKnown RBP eCLIP2.87□□□□□ -1.952e-6■■□□□ 14.5
KTN1-223ENST00000555573 HNRNPMP52272 730 aaKnown RBP eCLIP5.51□□□□□ -1.532e-6■■□□□ 13.9
KTN1-223ENST00000555573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.45□□□□□ -1.77e-7■■□□□ 12.1
KTN1-223ENST00000555573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.14□□□□□ -1.597e-10■■□□□ 11.8
KTN1-223ENST00000555573 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.98□□□□□ -1.133e-7■□□□□ 11.2
KTN1-223ENST00000555573 AARSP49588 968 aaKnown RBP eCLIP5.31□□□□□ -1.562e-6■□□□□ 10.9
KTN1-223ENST00000555573 EIF3DO15371 548 aaKnown RBP eCLIP4.49□□□□□ -1.693e-8■□□□□ 10.6
KTN1-223ENST00000555573 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.32□□□□□ -1.241e-7■□□□□ 9.6
KTN1-223ENST00000555573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.256e-7■□□□□ 9.4
KTN1-223ENST00000555573 ZNF622Q969S3 477 aaKnown RBP eCLIP4.61□□□□□ -1.679e-8■□□□□ 9.4
KTN1-223ENST00000555573 ZC3H11AO75152 810 aaKnown RBP eCLIP4.83□□□□□ -1.644e-6■□□□□ 9.1
KTN1-223ENST00000555573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.82□□□□□ -1.84e-7■□□□□ 9.1
KTN1-223ENST00000555573 RBM15Q96T37 977 aaKnown RBP eCLIP5.71□□□□□ -1.492e-6■□□□□ 9.1
KTN1-223ENST00000555573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.6□□□□□ -2.311e-8■□□□□ 8.4
KTN1-223ENST00000555573 HLTFQ14527 1009 aaKnown RBP eCLIP6□□□□□ -1.453e-7■□□□□ 8.3
Retrieved 27 of 27 RNA–protein pairs in 6.3 ms