RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 NBASA2RRP1 2371 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 DCHS1Q96JQ0 3298 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 A0A1W2PPM0 123 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 ZNF815PA8K554 130 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 A8MTW9 85 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 I3L3M4 83 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 K7EP34 96 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 COX6CP09669 75 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 KRTAP21-3Q3LHN1 58 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 CRCT1Q9UGL9 99 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 SPCS1Q9Y6A9 102 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 HRNRQ86YZ3 2850 aaPredicted RBP1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 ZZEF1O43149 2961 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 LRRK2Q5S007 2527 aa1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 ANKRD17O75179 2603 aaKnown RBP1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 SMG1Q96Q15 3661 aaKnown RBP1.67□□□□□ -2.14
RAB3IP-214ENST00000550847 WNK2Q9Y3S1 2297 aa1.66□□□□□ -2.14
RAB3IP-214ENST00000550847 NAV2Q8IVL1 2488 aa1.66□□□□□ -2.14
RAB3IP-214ENST00000550847 UBR5O95071 2799 aaPredicted RBP1.66□□□□□ -2.14
RAB3IP-214ENST00000550847 TRBV25-1A0A075B6N4 114 aa1.66□□□□□ -2.14
RAB3IP-214ENST00000550847 TMEM170BQ5T4T1 132 aa1.66□□□□□ -2.14
RAB3IP-214ENST00000550847 MED13LQ71F56 2210 aa1.66□□□□□ -2.14
RAB3IP-214ENST00000550847 LRBAP50851 2863 aa1.65□□□□□ -2.14
RAB3IP-214ENST00000550847 IGSF10Q6WRI0 2623 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 AKAP6Q13023 2319 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 COL12A1Q99715 3063 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 A0A096LNT2 108 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 IGIPA6NJ69 53 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 H3BUT2 72 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 M0QY20 66 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 POLR2KP53803 58 aaKnown RBP1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 DEFB131AP59861 70 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 SPINK13Q1W4C9 94 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 TMEM263Q8WUH6 116 aaKnown RBP1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 ABCA1O95477 2261 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 CFAP46Q8IYW2 2715 aa1.65□□□□□ -2.15
RAB3IP-214ENST00000550847 USP9XQ93008 2570 aaPredicted RBP1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 TACC2O95359 2948 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 MYO9AB2RTY4 2548 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 ZNF462Q96JM2 2506 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 FAM208BQ5VWN6 2430 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 ABCA2Q9BZC7 2435 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 RELNP78509 3460 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 hADV29S1A0JD25 119 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 ANGP03950 147 aaKnown RBP1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 ATXN8Q156A1 80 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 DEFB114Q30KQ6 69 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 RPL39LQ96EH5 51 aaKnown RBP1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 PRO1854Q9UHT4 67 aa1.64□□□□□ -2.15
RAB3IP-214ENST00000550847 FLNCQ14315 2725 aa1.63□□□□□ -2.15
RAB3IP-214ENST00000550847 USP24Q9UPU5 2620 aa1.63□□□□□ -2.15
RAB3IP-214ENST00000550847 TRGV1A0A0A0MS02 117 aa1.63□□□□□ -2.15
RAB3IP-214ENST00000550847 CFAP126Q5VTH2 177 aa1.63□□□□□ -2.15
RAB3IP-214ENST00000550847 Q6ZSA8 131 aa1.63□□□□□ -2.15
RAB3IP-214ENST00000550847 AMELXQ99217 191 aa1.63□□□□□ -2.15
RAB3IP-214ENST00000550847 UBE2D4Q9Y2X8 147 aa1.63□□□□□ -2.15
RAB3IP-214ENST00000550847 USP9YO00507 2555 aaPredicted RBP1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 PTPN13Q12923 2485 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 DCHS2Q6V1P9 2916 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 NDUFA1O15239 70 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 ACYP1P07311 99 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 HTN1P15515 57 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 UBE2D3P61077 147 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 UBE2D2P62837 147 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 Q5VV11 94 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 Q96NJ1 140 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 SPG11Q96JI7 2443 aa1.62□□□□□ -2.15
RAB3IP-214ENST00000550847 CCL18P55774 89 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 RPL39P62891 51 aaKnown RBP1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 DEFB136Q30KP8 78 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 LINC01600Q96MT4 127 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 KRTAP4-1Q9BYQ7 146 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 PRO0255Q9UI72 69 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 CENPEQ02224 2701 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 EPG5Q9HCE0 2579 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 ASH1LQ9NR48 2969 aaKnown RBP1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 ZFYVE26Q68DK2 2539 aa1.61□□□□□ -2.15
RAB3IP-214ENST00000550847 ABCA12Q86UK0 2595 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 H0YGX0 51 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 DEFB1P60022 68 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 SPAG11BQ08648 103 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 COX17Q14061 63 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 SPAG11AQ6PDA7 123 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 MUSTN1Q8IVN3 82 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 NOP10Q9NPE3 64 aaKnown RBP1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 CDC42SE2Q9NRR3 84 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 FLNAP21333 2647 aaKnown RBP1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 ITPR3Q14573 2671 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 CSPG4Q6UVK1 2322 aa1.6□□□□□ -2.15
RAB3IP-214ENST00000550847 UNC79Q9P2D8 2635 aa1.59□□□□□ -2.15
RAB3IP-214ENST00000550847 DOPEY2Q9Y3R5 2298 aa1.59□□□□□ -2.15
RAB3IP-214ENST00000550847 CELSR2Q9HCU4 2923 aa1.59□□□□□ -2.15
RAB3IP-214ENST00000550847 TLN2Q9Y4G6 2542 aa1.59□□□□□ -2.15
RAB3IP-214ENST00000550847 TRAV22A0A0B4J277 110 aa1.59□□□□□ -2.15
RAB3IP-214ENST00000550847 H3BNG1 76 aa1.59□□□□□ -2.15
RAB3IP-214ENST00000550847 CHKB-CPT1BH3BT56 60 aa1.59□□□□□ -2.15
RAB3IP-214ENST00000550847 SPART-AS1P0CW21 52 aa1.59□□□□□ -2.15
RAB3IP-214ENST00000550847 ETDBQ3ZM63 59 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms