RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 FSIP2Q5CZC0 6907 aa0.93□□□□□ -2.26
LDHBP3-201ENST00000514909 SETXQ7Z333 2677 aaKnown RBP0.92□□□□□ -2.26
LDHBP3-201ENST00000514909 USP9XQ93008 2570 aaPredicted RBP0.92□□□□□ -2.26
LDHBP3-201ENST00000514909 LOC730098B7Z3J9 87 aa0.92□□□□□ -2.26
LDHBP3-201ENST00000514909 COL6A5A8TX70 2615 aa0.92□□□□□ -2.26
LDHBP3-201ENST00000514909 DSTQ03001 7570 aaKnown RBP0.91□□□□□ -2.26
LDHBP3-201ENST00000514909 PRKDCP78527 4128 aaKnown RBP0.91□□□□□ -2.26
LDHBP3-201ENST00000514909 CRIP1P50238 77 aa0.91□□□□□ -2.26
LDHBP3-201ENST00000514909 CHD8Q9HCK8 2581 aa0.91□□□□□ -2.26
LDHBP3-201ENST00000514909 KMT2CQ8NEZ4 4911 aaKnown RBP0.89□□□□□ -2.27
LDHBP3-201ENST00000514909 CSPG4Q6UVK1 2322 aa0.88□□□□□ -2.27
LDHBP3-201ENST00000514909 TNXBP22105 4242 aa0.88□□□□□ -2.27
LDHBP3-201ENST00000514909 NAV2Q8IVL1 2488 aa0.88□□□□□ -2.27
LDHBP3-201ENST00000514909 SMIM5Q71RC9 77 aa0.88□□□□□ -2.27
LDHBP3-201ENST00000514909 ATRQ13535 2644 aa0.88□□□□□ -2.27
LDHBP3-201ENST00000514909 GLI2P10070 1586 aa0.87□□□□□ -2.27
LDHBP3-201ENST00000514909 ABCA10Q8WWZ4 1543 aa0.87□□□□□ -2.27
LDHBP3-201ENST00000514909 HECTD1Q9ULT8 2610 aa0.86□□□□□ -2.27
LDHBP3-201ENST00000514909 PRM1P04553 51 aa0.86□□□□□ -2.27
LDHBP3-201ENST00000514909 RYR2Q92736 4967 aa0.86□□□□□ -2.27
LDHBP3-201ENST00000514909 NSD1Q96L73 2696 aaPredicted RBP0.85□□□□□ -2.27
LDHBP3-201ENST00000514909 M0R2T5 61 aa0.85□□□□□ -2.27
LDHBP3-201ENST00000514909 SPTA1P02549 2419 aa0.85□□□□□ -2.27
LDHBP3-201ENST00000514909 KIAA0586Q9BVV6 1533 aa0.84□□□□□ -2.27
LDHBP3-201ENST00000514909 RYR1P21817 5038 aa0.84□□□□□ -2.27
LDHBP3-201ENST00000514909 ALS2Q96Q42 1657 aa0.84□□□□□ -2.28
LDHBP3-201ENST00000514909 LY75O60449 1722 aa0.84□□□□□ -2.28
LDHBP3-201ENST00000514909 CCDC168Q8NDH2 2452 aa0.83□□□□□ -2.28
LDHBP3-201ENST00000514909 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
LDHBP3-201ENST00000514909 ITPR3Q14573 2671 aa0.83□□□□□ -2.28
LDHBP3-201ENST00000514909 KMT2DO14686 5537 aa0.82□□□□□ -2.28
LDHBP3-201ENST00000514909 WDFY4Q6ZS81 3184 aa0.82□□□□□ -2.28
LDHBP3-201ENST00000514909 KNL1Q8NG31 2342 aa0.82□□□□□ -2.28
LDHBP3-201ENST00000514909 SRCAPQ6ZRS2 3230 aa0.82□□□□□ -2.28
LDHBP3-201ENST00000514909 EPG5Q9HCE0 2579 aa0.82□□□□□ -2.28
LDHBP3-201ENST00000514909 MYO18BQ8IUG5 2567 aa0.82□□□□□ -2.28
LDHBP3-201ENST00000514909 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
LDHBP3-201ENST00000514909 TNRC18O15417 2968 aaPredicted RBP0.81□□□□□ -2.28
LDHBP3-201ENST00000514909 SPTBN4Q9H254 2564 aa0.81□□□□□ -2.28
LDHBP3-201ENST00000514909 DOPEY1Q5JWR5 2465 aa0.8□□□□□ -2.28
LDHBP3-201ENST00000514909 PKD1L1Q8TDX9 2849 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 MYCBP2O75592 4640 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 CREBBPQ92793 2442 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 LRRK2Q5S007 2527 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 K7EMI3 77 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 IAPPP10997 89 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 DEFB135Q30KP9 77 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 KMT2AQ03164 3969 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 FAT4Q6V0I7 4981 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 PDZD2O15018 2839 aa0.79□□□□□ -2.28
LDHBP3-201ENST00000514909 FLNAP21333 2647 aaKnown RBP0.78□□□□□ -2.28
LDHBP3-201ENST00000514909 HIVEP3Q5T1R4 2406 aa0.78□□□□□ -2.28
LDHBP3-201ENST00000514909 MAST1Q9Y2H9 1570 aa0.78□□□□□ -2.29
LDHBP3-201ENST00000514909 EPPK1P58107 5090 aaKnown RBP0.77□□□□□ -2.29
LDHBP3-201ENST00000514909 ABCA13Q86UQ4 5058 aa0.77□□□□□ -2.29
LDHBP3-201ENST00000514909 SONP18583 2426 aaKnown RBP0.77□□□□□ -2.29
LDHBP3-201ENST00000514909 ANKRD11Q6UB99 2663 aaPredicted RBP0.77□□□□□ -2.29
LDHBP3-201ENST00000514909 HERC1Q15751 4861 aa0.76□□□□□ -2.29
LDHBP3-201ENST00000514909 PRXQ9BXM0 1461 aa0.76□□□□□ -2.29
LDHBP3-201ENST00000514909 DEFB130BP0DP73 79 aa0.76□□□□□ -2.29
LDHBP3-201ENST00000514909 DEFB130AP0DP74 79 aa0.76□□□□□ -2.29
LDHBP3-201ENST00000514909 CELSR3Q9NYQ7 3312 aa0.76□□□□□ -2.29
LDHBP3-201ENST00000514909 LPAP08519 4548 aa0.76□□□□□ -2.29
LDHBP3-201ENST00000514909 NBEAL2Q6ZNJ1 2754 aa0.75□□□□□ -2.29
LDHBP3-201ENST00000514909 FASNP49327 2511 aaKnown RBP0.75□□□□□ -2.29
LDHBP3-201ENST00000514909 KIF1AQ12756 1690 aa0.75□□□□□ -2.29
LDHBP3-201ENST00000514909 RYR3Q15413 4870 aa0.74□□□□□ -2.29
LDHBP3-201ENST00000514909 PREX2Q70Z35 1606 aa0.74□□□□□ -2.29
LDHBP3-201ENST00000514909 A0A0C4DFX4 3053 aa0.73□□□□□ -2.29
LDHBP3-201ENST00000514909 EEA1Q15075 1411 aa0.73□□□□□ -2.29
LDHBP3-201ENST00000514909 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
LDHBP3-201ENST00000514909 SSPOA2VEC9 5147 aa0.73□□□□□ -2.29
LDHBP3-201ENST00000514909 NCBP2-AS2Q69YL0 99 aa0.73□□□□□ -2.29
LDHBP3-201ENST00000514909 PCNTO95613 3336 aa0.73□□□□□ -2.29
LDHBP3-201ENST00000514909 GCN1Q92616 2671 aaKnown RBP0.72□□□□□ -2.29
LDHBP3-201ENST00000514909 EP300Q09472 2414 aaPredicted RBP0.72□□□□□ -2.29
LDHBP3-201ENST00000514909 SPRR2DP22532 72 aa0.72□□□□□ -2.29
LDHBP3-201ENST00000514909 SERF2P84101 59 aa0.72□□□□□ -2.29
LDHBP3-201ENST00000514909 USP9YO00507 2555 aaPredicted RBP0.71□□□□□ -2.3
LDHBP3-201ENST00000514909 RNF213Q63HN8 5207 aa0.71□□□□□ -2.3
LDHBP3-201ENST00000514909 HYDINQ4G0P3 5121 aa0.71□□□□□ -2.3
LDHBP3-201ENST00000514909 CPS1P31327 1500 aa0.71□□□□□ -2.3
LDHBP3-201ENST00000514909 NMES1Q9C002 83 aa0.71□□□□□ -2.3
LDHBP3-201ENST00000514909 CELSR1Q9NYQ6 3014 aa0.7□□□□□ -2.3
LDHBP3-201ENST00000514909 HRNRQ86YZ3 2850 aaPredicted RBP0.7□□□□□ -2.3
LDHBP3-201ENST00000514909 KRTAP20-1Q3LI63 56 aa0.7□□□□□ -2.3
LDHBP3-201ENST00000514909 MYO9AB2RTY4 2548 aa0.7□□□□□ -2.3
LDHBP3-201ENST00000514909 ALMS1Q8TCU4 4167 aa0.69□□□□□ -2.3
LDHBP3-201ENST00000514909 STAB2Q8WWQ8 2551 aa0.69□□□□□ -2.3
LDHBP3-201ENST00000514909 CEP350Q5VT06 3117 aa0.69□□□□□ -2.3
LDHBP3-201ENST00000514909 KALRNO60229 2985 aa0.69□□□□□ -2.3
LDHBP3-201ENST00000514909 PDE4DIPQ5VU43 2346 aa0.69□□□□□ -2.3
LDHBP3-201ENST00000514909 IGSF10Q6WRI0 2623 aa0.68□□□□□ -2.3
LDHBP3-201ENST00000514909 M0R1W7 72 aa0.68□□□□□ -2.3
LDHBP3-201ENST00000514909 UBR5O95071 2799 aaPredicted RBP0.68□□□□□ -2.3
LDHBP3-201ENST00000514909 FCER1GP30273 86 aa0.68□□□□□ -2.3
LDHBP3-201ENST00000514909 MINOS1Q5TGZ0 78 aa0.68□□□□□ -2.3
LDHBP3-201ENST00000514909 ITSN2Q9NZM3 1697 aa0.68□□□□□ -2.3
LDHBP3-201ENST00000514909 ZANQ9Y493 2812 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms