RNA–Protein interactions for RNA: ENST00000509018.5

RAPGEF6-208, Transcript of Rap guanine nucleotide exchange factor 6, human

APPRIS P3 TSL 1 (best) BASIC

Gene RAPGEF6, Length 8,357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF6-208	ENST00000509018	EPG5	Q9HCE0	2579 aa		4.18	□□□□□ -1.74
RAPGEF6-208	ENST00000509018	FN1	P02751	2386 aa	Known RBP	4.17	□□□□□ -1.74
RAPGEF6-208	ENST00000509018	LAMA3	Q16787	3333 aa		4.17	□□□□□ -1.74
RAPGEF6-208	ENST00000509018	PLXNB1	O43157	2135 aa		4.17	□□□□□ -1.74
RAPGEF6-208	ENST00000509018	LRRK2	Q5S007	2527 aa		4.16	□□□□□ -1.74
RAPGEF6-208	ENST00000509018		Q6ZRN7	208 aa	Predicted RBP	4.16	□□□□□ -1.74
RAPGEF6-208	ENST00000509018	USP9X	Q93008	2570 aa	Predicted RBP	4.15	□□□□□ -1.74
RAPGEF6-208	ENST00000509018	KTN1-AS1	Q86SY8	53 aa		4.15	□□□□□ -1.74
RAPGEF6-208	ENST00000509018	ANKRD11	Q6UB99	2663 aa	Predicted RBP	4.15	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	OXT	P01178	125 aa		4.15	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	C5orf42	Q9H799	3197 aa		4.14	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	F8	P00451	2351 aa		4.14	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	ACAN	P16112	2415 aa		4.13	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	LUZP6	Q538Z0	58 aa		4.12	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	DMAC1	Q96GE9	116 aa		4.12	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	DNAH14	Q0VDD8	3507 aa		4.12	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	MKI67	P46013	3256 aa	Known RBP	4.11	□□□□□ -1.75
RAPGEF6-208	ENST00000509018		A8MUU9	505 aa		4.11	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	UNC80	Q8N2C7	3258 aa		4.11	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	CDH23	Q9H251	3354 aa		4.1	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	MTOR	P42345	2549 aa		4.1	□□□□□ -1.75
RAPGEF6-208	ENST00000509018		Q5VV11	94 aa		4.09	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	TNRC18	O15417	2968 aa	Predicted RBP	4.09	□□□□□ -1.75
RAPGEF6-208	ENST00000509018	FLNB	O75369	2602 aa	Known RBP	4.09	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	SPRR1B	P22528	89 aa		4.09	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	LINC01558	Q9Y6Z2	57 aa		4.08	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	SPTBN4	Q9H254	2564 aa		4.08	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	USP9Y	O00507	2555 aa	Predicted RBP	4.08	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	TRIO	O75962	3097 aa		4.07	□□□□□ -1.76
RAPGEF6-208	ENST00000509018		A0A0A0MQY5	61 aa		4.07	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	KRTAP10-8	P60410	259 aa		4.06	□□□□□ -1.76
RAPGEF6-208	ENST00000509018		Q5XG85	94 aa		4.06	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	RPL37	P61927	97 aa	Known RBP	4.06	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	WDR87	Q6ZQQ6	2873 aa		4.06	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	SPANXA2-OT1	Q8N9U9	137 aa		4.06	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	AGRN	O00468	2067 aa		4.05	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	TLN2	Q9Y4G6	2542 aa		4.05	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.04	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	MYO9A	B2RTY4	2548 aa		4.04	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.04	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	C10orf95	Q9H7T3	257 aa		4.04	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	WDFY3	Q8IZQ1	3526 aa		4.04	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	KRTAP10-10	P60014	251 aa		4.04	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	ROMO1	P60602	79 aa		4.04	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	LAMA1	P25391	3075 aa		4.03	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	XIRP2	A4UGR9	3374 aa		4.03	□□□□□ -1.76
RAPGEF6-208	ENST00000509018	MGAM2	Q2M2H8	2515 aa		4.01	□□□□□ -1.77
RAPGEF6-208	ENST00000509018		A0A0C4DFX4	3053 aa		4.01	□□□□□ -1.77
RAPGEF6-208	ENST00000509018		Q75L30	129 aa		4.01	□□□□□ -1.77
RAPGEF6-208	ENST00000509018	SZT2	Q5T011	3432 aa		4	□□□□□ -1.77
RAPGEF6-208	ENST00000509018	MYO15A	Q9UKN7	3530 aa		4	□□□□□ -1.77
RAPGEF6-208	ENST00000509018	DMD	P11532	3685 aa		3.99	□□□□□ -1.77
RAPGEF6-208	ENST00000509018	EYS	Q5T1H1	3165 aa		3.99	□□□□□ -1.77
RAPGEF6-208	ENST00000509018	KRTAP29-1	A8MX34	341 aa	Predicted RBP	3.98	□□□□□ -1.77
RAPGEF6-208	ENST00000509018	XP32	Q5T750	250 aa		3.97	□□□□□ -1.77
RAPGEF6-208	ENST00000509018	RANBP2	P49792	3224 aa	Known RBP	3.96	□□□□□ -1.77
RAPGEF6-208	ENST00000509018	PRUNE2	Q8WUY3	3088 aa		3.96	□□□□□ -1.78
RAPGEF6-208	ENST00000509018	VCAN	P13611	3396 aa		3.95	□□□□□ -1.78
RAPGEF6-208	ENST00000509018	SPEN	Q96T58	3664 aa	Known RBP	3.93	□□□□□ -1.78
RAPGEF6-208	ENST00000509018	BSN	Q9UPA5	3926 aa		3.93	□□□□□ -1.78
RAPGEF6-208	ENST00000509018	CFAP54	Q96N23	3096 aa		3.92	□□□□□ -1.78
RAPGEF6-208	ENST00000509018	KRTAP13-1	Q8IUC0	172 aa		3.92	□□□□□ -1.78
RAPGEF6-208	ENST00000509018	KRTAP1-4	P0C5Y4	121 aa		3.92	□□□□□ -1.78
RAPGEF6-208	ENST00000509018	ZNF292	O60281	2723 aa		3.91	□□□□□ -1.78
RAPGEF6-208	ENST00000509018	ZFHX4	Q86UP3	3567 aa		3.88	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	CRCT1	Q9UGL9	99 aa		3.88	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	ANKRD17	O75179	2603 aa	Known RBP	3.88	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	KRTAP21-3	Q3LHN1	58 aa		3.88	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	SPEG	Q15772	3267 aa		3.88	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	MUC4	Q99102	2169 aa		3.87	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	FRY	Q5TBA9	3013 aa		3.87	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	KRTAP16-1	A8MUX0	517 aa		3.86	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	FRYL	O94915	3013 aa		3.85	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	MUC3A	Q02505	3323 aa		3.84	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	PRRC2C	Q9Y520	2896 aa	Known RBP	3.84	□□□□□ -1.79
RAPGEF6-208	ENST00000509018	KRTAP4-5	Q9BYR2	181 aa		3.84	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	DSP	P15924	2871 aa	Known RBP	3.83	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	FLNA	P21333	2647 aa	Known RBP	3.83	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	TNP1	P09430	55 aa		3.82	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	USP24	Q9UPU5	2620 aa		3.82	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	NDUFAF8	A1L188	74 aa		3.82	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	ITPR3	Q14573	2671 aa		3.82	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	AKAP13	Q12802	2813 aa		3.81	□□□□□ -1.8
RAPGEF6-208	ENST00000509018		P0C880	135 aa		3.81	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	VPS13A	Q96RL7	3174 aa		3.81	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	HELZ2	Q9BYK8	2649 aa	Known RBP	3.8	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	ATR	Q13535	2644 aa		3.79	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	KRTAP25-1	Q3LHN0	102 aa		3.78	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	FREM2	Q5SZK8	3169 aa		3.78	□□□□□ -1.8
RAPGEF6-208	ENST00000509018	RPS29	P62273	56 aa	Known RBP	3.77	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	HRNR	Q86YZ3	2850 aa	Predicted RBP	3.76	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	MAST4	O15021	2626 aa		3.76	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	KALRN	O60229	2985 aa		3.76	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	KRTAP13-3	Q3SY46	172 aa		3.74	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	AKAP9	Q99996	3911 aa		3.74	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	TEP1	Q99973	2627 aa	Known RBP	3.74	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	ASB16-AS1	Q495Z4	193 aa		3.73	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	WDFY4	Q6ZS81	3184 aa		3.73	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	UNC79	Q9P2D8	2635 aa		3.72	□□□□□ -1.81
RAPGEF6-208	ENST00000509018	STAB1	Q9NY15	2570 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 1058 ms