RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ODF3Q96PU9 254 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 TRGV9Q99603 122 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 NPVFQ9HCQ7 196 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 PKHD1P08F94 4074 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 LRP1BQ9NZR2 4599 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 DNAH8Q96JB1 4490 aa1.52□□□□□ -2.17
DEPDC1-204ENST00000489862 CTXND1A0A1B0GTU2 59 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 A8MTW9 85 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 APOC3P02656 99 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 SFTA3P0C7M3 94 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 IGLC2P0DOY2 106 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 RHOHQ15669 191 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 C9orf116Q5BN46 136 aaPredicted RBP1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 C2orf82Q6UX34 121 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 CYP2G1PQ6ZSU1 146 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 IFI27L1Q96BM0 104 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 CYSTM1Q9H1C7 97 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 PCLOQ9Y6V0 5065 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 DEFB4AO15263 64 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 COX7CP15954 63 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 DEFB131AP59861 70 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 SPANXN1Q5VSR9 72 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 MANBALQ9NQG1 85 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 CDC42SE1Q9NRR8 79 aa1.51□□□□□ -2.17
DEPDC1-204ENST00000489862 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 TRAV2A0A0B4J234 112 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 hADV29S1A0JD25 119 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 M0R3E3 92 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 IGHV3-33P01772 117 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 CCKP06307 115 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 PSMG4Q5JS54 123 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 C5orf38Q86SI9 138 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 TXNDC17Q9BRA2 123 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 GNG13Q9P2W3 67 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 RABAC1Q9UI14 185 aa1.5□□□□□ -2.17
DEPDC1-204ENST00000489862 A0A087WWC5 75 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 C7orf77A4D0Y5 90 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 HCG22E2RYF7 251 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 ARL14EPLP0DKL9 152 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 GCHFRP30047 84 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 DEFB135Q30KP9 77 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 C10orf113Q5VZT2 155 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 SPANXDQ9BXN6 97 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 SMCO4Q9NRQ5 59 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 TMEM167BQ9NRX6 74 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 ORMDL1Q9P0S3 153 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 TMEM14CQ9P0S9 112 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 ARL2-SNX15V9GYD0 113 aa1.49□□□□□ -2.17
DEPDC1-204ENST00000489862 FAT1Q14517 4588 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 TRBV6-4A0A1B0GX49 114 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 NUPR1O60356 82 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 UBE2L3P68036 154 aaKnown RBP1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 COA5Q86WW8 74 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 OR10AG1Q8NH19 301 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 VAMP8Q9BV40 100 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 MRPL35Q9NZE8 188 aaKnown RBP1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 IGKV2-40A0A087WW87 121 aaPredicted RBP1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 TRAV12-3A0A0B4J271 114 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 TEX49A0A1B0GTD5 131 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 NUPR2A6NF83 97 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 IGKV2D-40P01614 121 aaPredicted RBP1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 CRIP1P50238 77 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 ADIRFQ15847 76 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 SPINK13Q1W4C9 94 aa1.48□□□□□ -2.17
DEPDC1-204ENST00000489862 HSPG2P98160 4391 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 VPS13BQ7Z7G8 4022 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 A0A0J9YY99 117 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 TRBV6-5A0A0K0K1A5 114 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 LOC101927531A0A1B0GV80 90 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 DNAL4O96015 105 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 Q0VG73 95 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 PPDPFLQ8WWR9 84 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 ZNF625Q96I27 306 aaPredicted RBP1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 APLNQ9ULZ1 77 aa1.47□□□□□ -2.17
DEPDC1-204ENST00000489862 TRAV13-2A0A0B4J235 113 aa1.46□□□□□ -2.18
DEPDC1-204ENST00000489862 TRBV6-1A0A0K0K1D8 114 aa1.46□□□□□ -2.18
DEPDC1-204ENST00000489862 H3BRM9 83 aa1.46□□□□□ -2.18
DEPDC1-204ENST00000489862 BAGE2Q86Y30 109 aa1.46□□□□□ -2.18
DEPDC1-204ENST00000489862 HERC1Q15751 4861 aa1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 LCE6AA0A183 80 aa1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 SMIM27A0A1W2PRY6 76 aa1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 PDE6GP18545 87 aa1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 UBE2D1P51668 147 aa1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 TDRG1Q3Y452 100 aa1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 NOP10Q9NPE3 64 aaKnown RBP1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 C22orf24Q9Y442 160 aa1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 V9GYV3 84 aa1.45□□□□□ -2.18
DEPDC1-204ENST00000489862 TRAV23DV6A0A075B6W5 121 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 JMJD7-PLA2G4BH0Y9G9 81 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 SPINK4O60575 86 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 DEFB130BP0DP73 79 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 DEFB130AP0DP74 79 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 HTN1P15515 57 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 Q86TA4 180 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 PMCHL2Q9BQD1 86 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 C20orf78Q9BR46 151 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 DEFB131BA0A096LNP1 70 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 TRBV10-1A0A0K0K1A3 114 aa1.44□□□□□ -2.18
DEPDC1-204ENST00000489862 TRBV10-3A0A0K0K1G6 114 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms