RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 LUZP6Q538Z0 58 aa9.69□□□□□ -0.86
PTPN13-204ENST00000436978 Q75L30 129 aa9.69□□□□□ -0.86
PTPN13-204ENST00000436978 SEC61BP60468 96 aaKnown RBP9.68□□□□□ -0.86
PTPN13-204ENST00000436978 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
PTPN13-204ENST00000436978 Q5VSD8 79 aa9.66□□□□□ -0.86
PTPN13-204ENST00000436978 DMAC1Q96GE9 116 aa9.66□□□□□ -0.86
PTPN13-204ENST00000436978 CHD6Q8TD26 2715 aa9.66□□□□□ -0.86
PTPN13-204ENST00000436978 MKI67P46013 3256 aaKnown RBP9.66□□□□□ -0.86
PTPN13-204ENST00000436978 HTTP42858 3142 aa9.64□□□□□ -0.87
PTPN13-204ENST00000436978 LCE6AA0A183 80 aa9.64□□□□□ -0.87
PTPN13-204ENST00000436978 LINC00472Q9H8W2 130 aa9.63□□□□□ -0.87
PTPN13-204ENST00000436978 CFAP54Q96N23 3096 aa9.62□□□□□ -0.87
PTPN13-204ENST00000436978 MGAQ8IWI9 3026 aa9.62□□□□□ -0.87
PTPN13-204ENST00000436978 Q5W150 140 aa9.61□□□□□ -0.87
PTPN13-204ENST00000436978 Q8NDZ9 215 aa9.6□□□□□ -0.87
PTPN13-204ENST00000436978 NBEAL1Q6ZS30 2694 aa9.59□□□□□ -0.87
PTPN13-204ENST00000436978 ITPR2Q14571 2701 aa9.59□□□□□ -0.87
PTPN13-204ENST00000436978 KRTAP1-5Q9BYS1 174 aa9.58□□□□□ -0.88
PTPN13-204ENST00000436978 GCN1Q92616 2671 aaKnown RBP9.57□□□□□ -0.88
PTPN13-204ENST00000436978 TEP1Q99973 2627 aaKnown RBP9.56□□□□□ -0.88
PTPN13-204ENST00000436978 KRTAP26-1Q6PEX3 210 aa9.56□□□□□ -0.88
PTPN13-204ENST00000436978 LINC01558Q9Y6Z2 57 aa9.55□□□□□ -0.88
PTPN13-204ENST00000436978 FP248Q71RG6 208 aaPredicted RBP9.55□□□□□ -0.88
PTPN13-204ENST00000436978 SPINK7P58062 85 aa9.54□□□□□ -0.88
PTPN13-204ENST00000436978 LAMA2P24043 3122 aaKnown RBP9.53□□□□□ -0.88
PTPN13-204ENST00000436978 KRTAP10-1P60331 282 aa9.52□□□□□ -0.89
PTPN13-204ENST00000436978 Q8N9P0 234 aaPredicted RBP9.52□□□□□ -0.89
PTPN13-204ENST00000436978 OXTP01178 125 aa9.5□□□□□ -0.89
PTPN13-204ENST00000436978 R4GN34 69 aa9.49□□□□□ -0.89
PTPN13-204ENST00000436978 UNC79Q9P2D8 2635 aa9.48□□□□□ -0.89
PTPN13-204ENST00000436978 STAB1Q9NY15 2570 aa9.48□□□□□ -0.89
PTPN13-204ENST00000436978 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
PTPN13-204ENST00000436978 RANBP2P49792 3224 aaKnown RBP9.47□□□□□ -0.89
PTPN13-204ENST00000436978 LAMA3Q16787 3333 aa9.43□□□□□ -0.9
PTPN13-204ENST00000436978 BAHCC1Q9P281 2608 aa9.43□□□□□ -0.9
PTPN13-204ENST00000436978 SETXQ7Z333 2677 aaKnown RBP9.42□□□□□ -0.9
PTPN13-204ENST00000436978 IGSF10Q6WRI0 2623 aa9.42□□□□□ -0.9
PTPN13-204ENST00000436978 Q6ZR54 194 aa9.4□□□□□ -0.9
PTPN13-204ENST00000436978 KRTAP4-16G5E9R7 235 aaPredicted RBP9.37□□□□□ -0.91
PTPN13-204ENST00000436978 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
PTPN13-204ENST00000436978 XIRP2A4UGR9 3374 aa9.36□□□□□ -0.91
PTPN13-204ENST00000436978 BRCA2P51587 3418 aa9.36□□□□□ -0.91
PTPN13-204ENST00000436978 RPS29P62273 56 aaKnown RBP9.35□□□□□ -0.91
PTPN13-204ENST00000436978 DSPP15924 2871 aaKnown RBP9.34□□□□□ -0.91
PTPN13-204ENST00000436978 TRIOO75962 3097 aa9.34□□□□□ -0.91
PTPN13-204ENST00000436978 Q5VV11 94 aa9.33□□□□□ -0.92
PTPN13-204ENST00000436978 A0A0C4DFX4 3053 aa9.32□□□□□ -0.92
PTPN13-204ENST00000436978 PRUNE2Q8WUY3 3088 aa9.32□□□□□ -0.92
PTPN13-204ENST00000436978 VPS13AQ96RL7 3174 aa9.31□□□□□ -0.92
PTPN13-204ENST00000436978 RPL37P61927 97 aaKnown RBP9.3□□□□□ -0.92
PTPN13-204ENST00000436978 ASB16-AS1Q495Z4 193 aa9.3□□□□□ -0.92
PTPN13-204ENST00000436978 H1FX-AS1Q4G0G2 97 aa9.29□□□□□ -0.92
PTPN13-204ENST00000436978 Q5XG85 94 aa9.29□□□□□ -0.92
PTPN13-204ENST00000436978 M0QZ58 72 aa9.28□□□□□ -0.92
PTPN13-204ENST00000436978 ROMO1P60602 79 aa9.27□□□□□ -0.93
PTPN13-204ENST00000436978 WDFY4Q6ZS81 3184 aa9.27□□□□□ -0.93
PTPN13-204ENST00000436978 PLAC4Q8WY50 150 aa9.26□□□□□ -0.93
PTPN13-204ENST00000436978 CDH23Q9H251 3354 aa9.25□□□□□ -0.93
PTPN13-204ENST00000436978 FRYQ5TBA9 3013 aa9.24□□□□□ -0.93
PTPN13-204ENST00000436978 PANO1I0J062 215 aa9.24□□□□□ -0.93
PTPN13-204ENST00000436978 CYSTM1Q9H1C7 97 aa9.23□□□□□ -0.93
PTPN13-204ENST00000436978 MAP1AP78559 2803 aaPredicted RBP9.23□□□□□ -0.93
PTPN13-204ENST00000436978 A0A087X002 238 aa9.23□□□□□ -0.93
PTPN13-204ENST00000436978 ADM2Q7Z4H4 148 aa9.22□□□□□ -0.93
PTPN13-204ENST00000436978 NOTCH1P46531 2555 aa9.22□□□□□ -0.93
PTPN13-204ENST00000436978 DMBT1Q9UGM3 2413 aaPredicted RBP9.2□□□□□ -0.94
PTPN13-204ENST00000436978 NBEAL2Q6ZNJ1 2754 aa9.19□□□□□ -0.94
PTPN13-204ENST00000436978 NSD1Q96L73 2696 aaPredicted RBP9.19□□□□□ -0.94
PTPN13-204ENST00000436978 DNAH14Q0VDD8 3507 aa9.18□□□□□ -0.94
PTPN13-204ENST00000436978 KRTAP29-1A8MX34 341 aaPredicted RBP9.18□□□□□ -0.94
PTPN13-204ENST00000436978 Q6ZRN7 208 aaPredicted RBP9.16□□□□□ -0.94
PTPN13-204ENST00000436978 APCP25054 2843 aa9.16□□□□□ -0.94
PTPN13-204ENST00000436978 STAB2Q8WWQ8 2551 aa9.15□□□□□ -0.94
PTPN13-204ENST00000436978 KRTAP21-3Q3LHN1 58 aa9.15□□□□□ -0.94
PTPN13-204ENST00000436978 UTP20O75691 2785 aaKnown RBP9.15□□□□□ -0.95
PTPN13-204ENST00000436978 LRBAP50851 2863 aa9.13□□□□□ -0.95
PTPN13-204ENST00000436978 CELSR3Q9NYQ7 3312 aa9.12□□□□□ -0.95
PTPN13-204ENST00000436978 A0A0A0MQY5 61 aa9.12□□□□□ -0.95
PTPN13-204ENST00000436978 PRAC1Q96KF2 57 aa9.08□□□□□ -0.96
PTPN13-204ENST00000436978 USP34Q70CQ2 3546 aa9.08□□□□□ -0.96
PTPN13-204ENST00000436978 FRYLO94915 3013 aa9.06□□□□□ -0.96
PTPN13-204ENST00000436978 LAMA1P25391 3075 aa9.05□□□□□ -0.96
PTPN13-204ENST00000436978 UNC80Q8N2C7 3258 aa9.05□□□□□ -0.96
PTPN13-204ENST00000436978 KALRNO60229 2985 aa9.02□□□□□ -0.97
PTPN13-204ENST00000436978 ITPR1Q14643 2758 aa9.02□□□□□ -0.97
PTPN13-204ENST00000436978 UBR5O95071 2799 aaPredicted RBP9.01□□□□□ -0.97
PTPN13-204ENST00000436978 SPATA8Q6RVD6 105 aa9.01□□□□□ -0.97
PTPN13-204ENST00000436978 SPTBN5Q9NRC6 3674 aaKnown RBP9□□□□□ -0.97
PTPN13-204ENST00000436978 KRTAP11-1Q8IUC1 163 aa9□□□□□ -0.97
PTPN13-204ENST00000436978 NOTCH2NLQ7Z3S9 236 aa8.99□□□□□ -0.97
PTPN13-204ENST00000436978 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
PTPN13-204ENST00000436978 A8MUU9 505 aa8.95□□□□□ -0.98
PTPN13-204ENST00000436978 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
PTPN13-204ENST00000436978 SZT2Q5T011 3432 aa8.93□□□□□ -0.98
PTPN13-204ENST00000436978 KRTAP7-1Q8IUC3 87 aa8.92□□□□□ -0.98
PTPN13-204ENST00000436978 FLNCQ14315 2725 aa8.91□□□□□ -0.98
PTPN13-204ENST00000436978 VCANP13611 3396 aa8.88□□□□□ -0.99
PTPN13-204ENST00000436978 COL6A3P12111 3177 aa8.87□□□□□ -0.99
PTPN13-204ENST00000436978 REV3LO60673 3130 aa8.86□□□□□ -0.99
PTPN13-204ENST00000436978 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms