RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
PCGF3-201ENST00000362003 Q6ZR54 194 aa10.24□□□□□ -0.77
PCGF3-201ENST00000362003 KRTAP4-16G5E9R7 235 aaPredicted RBP10.24□□□□□ -0.77
PCGF3-201ENST00000362003 HTTP42858 3142 aa10.21□□□□□ -0.77
PCGF3-201ENST00000362003 CYSTM1Q9H1C7 97 aa10.2□□□□□ -0.78
PCGF3-201ENST00000362003 PANO1I0J062 215 aa10.19□□□□□ -0.78
PCGF3-201ENST00000362003 FP248Q71RG6 208 aaPredicted RBP10.18□□□□□ -0.78
PCGF3-201ENST00000362003 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
PCGF3-201ENST00000362003 Q5XG85 94 aa10.17□□□□□ -0.78
PCGF3-201ENST00000362003 TRANK1O15050 2925 aa10.16□□□□□ -0.78
PCGF3-201ENST00000362003 FLNBO75369 2602 aaKnown RBP10.12□□□□□ -0.79
PCGF3-201ENST00000362003 MGAM2Q2M2H8 2515 aa10.12□□□□□ -0.79
PCGF3-201ENST00000362003 Q5VV11 94 aa10.11□□□□□ -0.79
PCGF3-201ENST00000362003 LUZP6Q538Z0 58 aa10.11□□□□□ -0.79
PCGF3-201ENST00000362003 ATRQ13535 2644 aa10.09□□□□□ -0.79
PCGF3-201ENST00000362003 R4GN34 69 aa10.08□□□□□ -0.8
PCGF3-201ENST00000362003 OXTP01178 125 aa10.07□□□□□ -0.8
PCGF3-201ENST00000362003 A0A087X002 238 aa10.05□□□□□ -0.8
PCGF3-201ENST00000362003 KRTAP29-1A8MX34 341 aaPredicted RBP10.04□□□□□ -0.8
PCGF3-201ENST00000362003 USP24Q9UPU5 2620 aa10.04□□□□□ -0.8
PCGF3-201ENST00000362003 Q6ZRN7 208 aaPredicted RBP10.03□□□□□ -0.8
PCGF3-201ENST00000362003 CFAP46Q8IYW2 2715 aa10.02□□□□□ -0.81
PCGF3-201ENST00000362003 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
PCGF3-201ENST00000362003 ASB16-AS1Q495Z4 193 aa9.99□□□□□ -0.81
PCGF3-201ENST00000362003 H1FX-AS1Q4G0G2 97 aa9.99□□□□□ -0.81
PCGF3-201ENST00000362003 MAST4O15021 2626 aa9.97□□□□□ -0.81
PCGF3-201ENST00000362003 KRTAP11-1Q8IUC1 163 aa9.96□□□□□ -0.82
PCGF3-201ENST00000362003 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
PCGF3-201ENST00000362003 M0QZ58 72 aa9.93□□□□□ -0.82
PCGF3-201ENST00000362003 ZNF292O60281 2723 aa9.92□□□□□ -0.82
PCGF3-201ENST00000362003 PRAC1Q96KF2 57 aa9.9□□□□□ -0.82
PCGF3-201ENST00000362003 KRTAP7-1Q8IUC3 87 aa9.9□□□□□ -0.82
PCGF3-201ENST00000362003 ROMO1P60602 79 aa9.89□□□□□ -0.83
PCGF3-201ENST00000362003 AKAP13Q12802 2813 aa9.89□□□□□ -0.83
PCGF3-201ENST00000362003 ADM2Q7Z4H4 148 aa9.89□□□□□ -0.83
PCGF3-201ENST00000362003 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
PCGF3-201ENST00000362003 PCNTO95613 3336 aa9.84□□□□□ -0.83
PCGF3-201ENST00000362003 MKI67P46013 3256 aaKnown RBP9.84□□□□□ -0.83
PCGF3-201ENST00000362003 MGAQ8IWI9 3026 aa9.83□□□□□ -0.84
PCGF3-201ENST00000362003 KRTAP13-1Q8IUC0 172 aa9.83□□□□□ -0.84
PCGF3-201ENST00000362003 KRTAP21-3Q3LHN1 58 aa9.81□□□□□ -0.84
PCGF3-201ENST00000362003 PLAC4Q8WY50 150 aa9.79□□□□□ -0.84
PCGF3-201ENST00000362003 RANBP2P49792 3224 aaKnown RBP9.79□□□□□ -0.84
PCGF3-201ENST00000362003 KRTAP13-2Q52LG2 175 aa9.78□□□□□ -0.84
PCGF3-201ENST00000362003 SPATA8Q6RVD6 105 aa9.76□□□□□ -0.85
PCGF3-201ENST00000362003 LAMA3Q16787 3333 aa9.69□□□□□ -0.86
PCGF3-201ENST00000362003 IGSF10Q6WRI0 2623 aa9.69□□□□□ -0.86
PCGF3-201ENST00000362003 CENPEQ02224 2701 aa9.64□□□□□ -0.87
PCGF3-201ENST00000362003 TEX15Q9BXT5 2789 aa9.63□□□□□ -0.87
PCGF3-201ENST00000362003 CFAP54Q96N23 3096 aa9.63□□□□□ -0.87
PCGF3-201ENST00000362003 UNC79Q9P2D8 2635 aa9.61□□□□□ -0.87
PCGF3-201ENST00000362003 CHD6Q8TD26 2715 aa9.61□□□□□ -0.87
PCGF3-201ENST00000362003 TEP1Q99973 2627 aaKnown RBP9.59□□□□□ -0.87
PCGF3-201ENST00000362003 GCN1Q92616 2671 aaKnown RBP9.59□□□□□ -0.88
PCGF3-201ENST00000362003 A8MUU9 505 aa9.57□□□□□ -0.88
PCGF3-201ENST00000362003 A0A0A0MQY5 61 aa9.56□□□□□ -0.88
PCGF3-201ENST00000362003 BRCA2P51587 3418 aa9.56□□□□□ -0.88
PCGF3-201ENST00000362003 SETXQ7Z333 2677 aaKnown RBP9.53□□□□□ -0.88
PCGF3-201ENST00000362003 KMT2BQ9UMN6 2715 aaPredicted RBP9.51□□□□□ -0.89
PCGF3-201ENST00000362003 DSPP15924 2871 aaKnown RBP9.48□□□□□ -0.89
PCGF3-201ENST00000362003 TRIOO75962 3097 aa9.48□□□□□ -0.89
PCGF3-201ENST00000362003 WDFY4Q6ZS81 3184 aa9.48□□□□□ -0.89
PCGF3-201ENST00000362003 COL6A5A8TX70 2615 aa9.47□□□□□ -0.89
PCGF3-201ENST00000362003 NBEAL1Q6ZS30 2694 aa9.47□□□□□ -0.89
PCGF3-201ENST00000362003 A8MU10 97 aa9.47□□□□□ -0.89
PCGF3-201ENST00000362003 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.9
PCGF3-201ENST00000362003 BAHCC1Q9P281 2608 aa9.45□□□□□ -0.9
PCGF3-201ENST00000362003 ITPR2Q14571 2701 aa9.43□□□□□ -0.9
PCGF3-201ENST00000362003 CDH23Q9H251 3354 aa9.42□□□□□ -0.9
PCGF3-201ENST00000362003 A0A0C4DFX4 3053 aa9.42□□□□□ -0.9
PCGF3-201ENST00000362003 PRUNE2Q8WUY3 3088 aa9.41□□□□□ -0.9
PCGF3-201ENST00000362003 STAB1Q9NY15 2570 aa9.41□□□□□ -0.9
PCGF3-201ENST00000362003 A6NN06 94 aa9.4□□□□□ -0.9
PCGF3-201ENST00000362003 LAMA2P24043 3122 aaKnown RBP9.38□□□□□ -0.91
PCGF3-201ENST00000362003 H3BS24 57 aa9.37□□□□□ -0.91
PCGF3-201ENST00000362003 KRTAP25-1Q3LHN0 102 aa9.37□□□□□ -0.91
PCGF3-201ENST00000362003 UNC80Q8N2C7 3258 aa9.37□□□□□ -0.91
PCGF3-201ENST00000362003 NBEAL2Q6ZNJ1 2754 aa9.36□□□□□ -0.91
PCGF3-201ENST00000362003 KRTAP1-4P0C5Y4 121 aa9.34□□□□□ -0.91
PCGF3-201ENST00000362003 FRYQ5TBA9 3013 aa9.31□□□□□ -0.92
PCGF3-201ENST00000362003 NOTCH1P46531 2555 aa9.31□□□□□ -0.92
PCGF3-201ENST00000362003 NSD1Q96L73 2696 aaPredicted RBP9.27□□□□□ -0.93
PCGF3-201ENST00000362003 XP32Q5T750 250 aa9.27□□□□□ -0.93
PCGF3-201ENST00000362003 XIRP2A4UGR9 3374 aa9.26□□□□□ -0.93
PCGF3-201ENST00000362003 VPS13AQ96RL7 3174 aa9.24□□□□□ -0.93
PCGF3-201ENST00000362003 SZT2Q5T011 3432 aa9.23□□□□□ -0.93
PCGF3-201ENST00000362003 TNP1P09430 55 aa9.19□□□□□ -0.94
PCGF3-201ENST00000362003 ITPR1Q14643 2758 aa9.19□□□□□ -0.94
PCGF3-201ENST00000362003 UBR5O95071 2799 aaPredicted RBP9.19□□□□□ -0.94
PCGF3-201ENST00000362003 UTP20O75691 2785 aaKnown RBP9.18□□□□□ -0.94
PCGF3-201ENST00000362003 MAP1AP78559 2803 aaPredicted RBP9.16□□□□□ -0.94
PCGF3-201ENST00000362003 DMBT1Q9UGM3 2413 aaPredicted RBP9.15□□□□□ -0.94
PCGF3-201ENST00000362003 LRBAP50851 2863 aa9.14□□□□□ -0.95
PCGF3-201ENST00000362003 TPRXLQ17RH7 258 aa9.13□□□□□ -0.95
PCGF3-201ENST00000362003 CELSR3Q9NYQ7 3312 aa9.12□□□□□ -0.95
PCGF3-201ENST00000362003 DNAH14Q0VDD8 3507 aa9.11□□□□□ -0.95
PCGF3-201ENST00000362003 TNRC18O15417 2968 aaPredicted RBP9.1□□□□□ -0.95
PCGF3-201ENST00000362003 LAMA1P25391 3075 aa9.09□□□□□ -0.95
PCGF3-201ENST00000362003 COL6A3P12111 3177 aa9.09□□□□□ -0.95
PCGF3-201ENST00000362003 KALRNO60229 2985 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms