RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 Q5VV11 94 aa8.96□□□□□ -0.97
COL11A2-202ENST00000361917 USP24Q9UPU5 2620 aa8.96□□□□□ -0.97
COL11A2-202ENST00000361917 R4GN34 69 aa8.96□□□□□ -0.97
COL11A2-202ENST00000361917 Q5VSD8 79 aa8.95□□□□□ -0.98
COL11A2-202ENST00000361917 SPRR1BP22528 89 aa8.94□□□□□ -0.98
COL11A2-202ENST00000361917 A0A0C4DFX4 3053 aa8.91□□□□□ -0.98
COL11A2-202ENST00000361917 KRTAP26-1Q6PEX3 210 aa8.91□□□□□ -0.98
COL11A2-202ENST00000361917 KRTAP10-1P60331 282 aa8.9□□□□□ -0.98
COL11A2-202ENST00000361917 KRTAP10-2P60368 255 aa8.89□□□□□ -0.99
COL11A2-202ENST00000361917 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
COL11A2-202ENST00000361917 CHD7Q9P2D1 2997 aa8.88□□□□□ -0.99
COL11A2-202ENST00000361917 CFAP54Q96N23 3096 aa8.83□□□□□ -1
COL11A2-202ENST00000361917 M0QZ58 72 aa8.82□□□□□ -1
COL11A2-202ENST00000361917 FLNAP21333 2647 aaKnown RBP8.82□□□□□ -1
COL11A2-202ENST00000361917 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
COL11A2-202ENST00000361917 ROMO1P60602 79 aa8.79□□□□□ -1
COL11A2-202ENST00000361917 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
COL11A2-202ENST00000361917 LCE6AA0A183 80 aa8.78□□□□□ -1
COL11A2-202ENST00000361917 PANO1I0J062 215 aa8.77□□□□□ -1.01
COL11A2-202ENST00000361917 ITPR3Q14573 2671 aa8.76□□□□□ -1.01
COL11A2-202ENST00000361917 A0A0A0MQY5 61 aa8.76□□□□□ -1.01
COL11A2-202ENST00000361917 ADM2Q7Z4H4 148 aa8.75□□□□□ -1.01
COL11A2-202ENST00000361917 HELZ2Q9BYK8 2649 aaKnown RBP8.75□□□□□ -1.01
COL11A2-202ENST00000361917 SPATA8Q6RVD6 105 aa8.74□□□□□ -1.01
COL11A2-202ENST00000361917 Q6ZR54 194 aa8.74□□□□□ -1.01
COL11A2-202ENST00000361917 MKI67P46013 3256 aaKnown RBP8.72□□□□□ -1.01
COL11A2-202ENST00000361917 ATRQ13535 2644 aa8.72□□□□□ -1.01
COL11A2-202ENST00000361917 MAST4O15021 2626 aa8.7□□□□□ -1.02
COL11A2-202ENST00000361917 A0A087X002 238 aa8.68□□□□□ -1.02
COL11A2-202ENST00000361917 PLAC4Q8WY50 150 aa8.67□□□□□ -1.02
COL11A2-202ENST00000361917 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
COL11A2-202ENST00000361917 CHD9Q3L8U1 2897 aa8.63□□□□□ -1.03
COL11A2-202ENST00000361917 HTTP42858 3142 aa8.63□□□□□ -1.03
COL11A2-202ENST00000361917 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
COL11A2-202ENST00000361917 LAMA2P24043 3122 aaKnown RBP8.62□□□□□ -1.03
COL11A2-202ENST00000361917 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
COL11A2-202ENST00000361917 CFAP46Q8IYW2 2715 aa8.55□□□□□ -1.04
COL11A2-202ENST00000361917 KRTAP11-1Q8IUC1 163 aa8.55□□□□□ -1.04
COL11A2-202ENST00000361917 LAMA3Q16787 3333 aa8.53□□□□□ -1.04
COL11A2-202ENST00000361917 RANBP2P49792 3224 aaKnown RBP8.53□□□□□ -1.04
COL11A2-202ENST00000361917 BRCA2P51587 3418 aa8.53□□□□□ -1.04
COL11A2-202ENST00000361917 TRIOO75962 3097 aa8.53□□□□□ -1.04
COL11A2-202ENST00000361917 MGAQ8IWI9 3026 aa8.52□□□□□ -1.05
COL11A2-202ENST00000361917 CHD6Q8TD26 2715 aa8.49□□□□□ -1.05
COL11A2-202ENST00000361917 AKAP13Q12802 2813 aa8.48□□□□□ -1.05
COL11A2-202ENST00000361917 A8MU10 97 aa8.47□□□□□ -1.05
COL11A2-202ENST00000361917 UNC80Q8N2C7 3258 aa8.44□□□□□ -1.06
COL11A2-202ENST00000361917 STAB1Q9NY15 2570 aa8.43□□□□□ -1.06
COL11A2-202ENST00000361917 A8MUU9 505 aa8.43□□□□□ -1.06
COL11A2-202ENST00000361917 FREM2Q5SZK8 3169 aa8.42□□□□□ -1.06
COL11A2-202ENST00000361917 ASB16-AS1Q495Z4 193 aa8.42□□□□□ -1.06
COL11A2-202ENST00000361917 CENPEQ02224 2701 aa8.42□□□□□ -1.06
COL11A2-202ENST00000361917 A6NN06 94 aa8.41□□□□□ -1.06
COL11A2-202ENST00000361917 Q6ZRN7 208 aaPredicted RBP8.41□□□□□ -1.06
COL11A2-202ENST00000361917 KRTAP7-1Q8IUC3 87 aa8.41□□□□□ -1.06
COL11A2-202ENST00000361917 XIRP2A4UGR9 3374 aa8.4□□□□□ -1.06
COL11A2-202ENST00000361917 WDFY4Q6ZS81 3184 aa8.4□□□□□ -1.06
COL11A2-202ENST00000361917 GCN1Q92616 2671 aaKnown RBP8.38□□□□□ -1.07
COL11A2-202ENST00000361917 RPS29P62273 56 aaKnown RBP8.38□□□□□ -1.07
COL11A2-202ENST00000361917 CELSR3Q9NYQ7 3312 aa8.38□□□□□ -1.07
COL11A2-202ENST00000361917 TRANK1O15050 2925 aa8.37□□□□□ -1.07
COL11A2-202ENST00000361917 KRTAP16-1A8MUX0 517 aa8.37□□□□□ -1.07
COL11A2-202ENST00000361917 KRTAP13-2Q52LG2 175 aa8.37□□□□□ -1.07
COL11A2-202ENST00000361917 SETXQ7Z333 2677 aaKnown RBP8.37□□□□□ -1.07
COL11A2-202ENST00000361917 NBEAL1Q6ZS30 2694 aa8.37□□□□□ -1.07
COL11A2-202ENST00000361917 TEP1Q99973 2627 aaKnown RBP8.36□□□□□ -1.07
COL11A2-202ENST00000361917 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
COL11A2-202ENST00000361917 C20orf166-AS1Q96NR2 134 aa8.35□□□□□ -1.07
COL11A2-202ENST00000361917 TEX15Q9BXT5 2789 aa8.35□□□□□ -1.07
COL11A2-202ENST00000361917 FLG2Q5D862 2391 aaPredicted RBP8.34□□□□□ -1.07
COL11A2-202ENST00000361917 PRUNE2Q8WUY3 3088 aa8.33□□□□□ -1.08
COL11A2-202ENST00000361917 FRYQ5TBA9 3013 aa8.33□□□□□ -1.08
COL11A2-202ENST00000361917 DNAH14Q0VDD8 3507 aa8.31□□□□□ -1.08
COL11A2-202ENST00000361917 UNC79Q9P2D8 2635 aa8.31□□□□□ -1.08
COL11A2-202ENST00000361917 NBEAL2Q6ZNJ1 2754 aa8.3□□□□□ -1.08
COL11A2-202ENST00000361917 CDH23Q9H251 3354 aa8.3□□□□□ -1.08
COL11A2-202ENST00000361917 NDUFAF8A1L188 74 aa8.29□□□□□ -1.08
COL11A2-202ENST00000361917 VPS13AQ96RL7 3174 aa8.29□□□□□ -1.08
COL11A2-202ENST00000361917 KRTAP21-3Q3LHN1 58 aa8.28□□□□□ -1.08
COL11A2-202ENST00000361917 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
COL11A2-202ENST00000361917 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
COL11A2-202ENST00000361917 BAHCC1Q9P281 2608 aa8.23□□□□□ -1.09
COL11A2-202ENST00000361917 ZNF292O60281 2723 aa8.2□□□□□ -1.1
COL11A2-202ENST00000361917 KALRNO60229 2985 aa8.19□□□□□ -1.1
COL11A2-202ENST00000361917 COL6A5A8TX70 2615 aa8.18□□□□□ -1.1
COL11A2-202ENST00000361917 MAP1AP78559 2803 aaPredicted RBP8.18□□□□□ -1.1
COL11A2-202ENST00000361917 DSPP15924 2871 aaKnown RBP8.16□□□□□ -1.1
COL11A2-202ENST00000361917 VCANP13611 3396 aa8.15□□□□□ -1.1
COL11A2-202ENST00000361917 TNP1P09430 55 aa8.14□□□□□ -1.11
COL11A2-202ENST00000361917 NOTCH1P46531 2555 aa8.12□□□□□ -1.11
COL11A2-202ENST00000361917 C10orf95Q9H7T3 257 aa8.11□□□□□ -1.11
COL11A2-202ENST00000361917 LAMA1P25391 3075 aa8.08□□□□□ -1.12
COL11A2-202ENST00000361917 NBEAQ8NFP9 2946 aa8.07□□□□□ -1.12
COL11A2-202ENST00000361917 IGSF10Q6WRI0 2623 aa8.07□□□□□ -1.12
COL11A2-202ENST00000361917 SZT2Q5T011 3432 aa8.06□□□□□ -1.12
COL11A2-202ENST00000361917 COL6A3P12111 3177 aa8.04□□□□□ -1.12
COL11A2-202ENST00000361917 A0A1B0GVY2 172 aa8.01□□□□□ -1.13
COL11A2-202ENST00000361917 LRBAP50851 2863 aa8□□□□□ -1.13
COL11A2-202ENST00000361917 STAB2Q8WWQ8 2551 aa7.99□□□□□ -1.13
COL11A2-202ENST00000361917 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms