RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
COL11A2-202ENST00000361917 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
COL11A2-202ENST00000361917 EHMT2Q96KQ7 1210 aa24.03■■□□□ 1.44
COL11A2-202ENST00000361917 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
COL11A2-202ENST00000361917 PELP1Q8IZL8 1130 aaKnown RBP23.56■■□□□ 1.36
COL11A2-202ENST00000361917 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
COL11A2-202ENST00000361917 APLP2Q06481 763 aa23.37■■□□□ 1.33
COL11A2-202ENST00000361917 TTBK1Q5TCY1 1321 aaPredicted RBP23.22■■□□□ 1.31
COL11A2-202ENST00000361917 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
COL11A2-202ENST00000361917 PCGF6Q9BYE7 350 aa22.9■■□□□ 1.26
COL11A2-202ENST00000361917 RANGAP1P46060 587 aaPredicted RBP22.9■■□□□ 1.26
COL11A2-202ENST00000361917 ERICH6Q7L0X2 663 aa22.77■■□□□ 1.24
COL11A2-202ENST00000361917 ATP1B4Q9UN42 357 aaPredicted RBP22.69■■□□□ 1.22
COL11A2-202ENST00000361917 CENPBP07199 599 aaPredicted RBP22.61■■□□□ 1.21
COL11A2-202ENST00000361917 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
COL11A2-202ENST00000361917 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
COL11A2-202ENST00000361917 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
COL11A2-202ENST00000361917 UBTFP17480 764 aaKnown RBP22.38■■□□□ 1.17
COL11A2-202ENST00000361917 YTHDC1Q96MU7 727 aaKnown RBP22.35■■□□□ 1.17
COL11A2-202ENST00000361917 NEFLP07196 543 aa22.25■■□□□ 1.15
COL11A2-202ENST00000361917 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
COL11A2-202ENST00000361917 MYT1Q01538 1121 aa21.89■■□□□ 1.09
COL11A2-202ENST00000361917 POLR3GLQ9BT43 218 aa21.88■■□□□ 1.09
COL11A2-202ENST00000361917 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
COL11A2-202ENST00000361917 ITGAEP38570 1179 aa21.86■■□□□ 1.09
COL11A2-202ENST00000361917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.79■■□□□ 1.08
COL11A2-202ENST00000361917 HNRNPUL2Q1KMD3 747 aaKnown RBP21.79■■□□□ 1.08
COL11A2-202ENST00000361917 DAXXQ9UER7 740 aaPredicted RBP21.75■■□□□ 1.07
COL11A2-202ENST00000361917 TRIM26Q12899 539 aaPredicted RBP21.74■■□□□ 1.07
COL11A2-202ENST00000361917 CNGB1Q14028 1251 aaPredicted RBP21.72■■□□□ 1.07
COL11A2-202ENST00000361917 CHIC1Q5VXU3 224 aa21.61■■□□□ 1.05
COL11A2-202ENST00000361917 HRCP23327 699 aa21.59■■□□□ 1.05
COL11A2-202ENST00000361917 LOC105371045A0A1W2PR82 267 aa21.51■■□□□ 1.03
COL11A2-202ENST00000361917 SLC4A1APQ9BWU0 796 aaKnown RBP21.5■■□□□ 1.03
COL11A2-202ENST00000361917 CLSPNQ9HAW4 1339 aa21.27■■□□□ 1
COL11A2-202ENST00000361917 ZNF316A6NFI3 1004 aaPredicted RBP21.26■□□□□ 0.99
COL11A2-202ENST00000361917 FAM50AQ14320 339 aaKnown RBP21.2■□□□□ 0.98
COL11A2-202ENST00000361917 RTL5Q5HYW3 569 aaPredicted RBP21.16■□□□□ 0.98
COL11A2-202ENST00000361917 DIEXFQ68CQ4 756 aaKnown RBP21.15■□□□□ 0.98
COL11A2-202ENST00000361917 TRIM52Q96A61 297 aa21.13■□□□□ 0.97
COL11A2-202ENST00000361917 NEUROD1Q13562 356 aa21.09■□□□□ 0.97
COL11A2-202ENST00000361917 BCANQ96GW7 911 aa21.01■□□□□ 0.95
COL11A2-202ENST00000361917 ZNF326Q5BKZ1 582 aaKnown RBP20.97■□□□□ 0.95
COL11A2-202ENST00000361917 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
COL11A2-202ENST00000361917 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
COL11A2-202ENST00000361917 ANP32CO43423 234 aa20.83■□□□□ 0.92
COL11A2-202ENST00000361917 SLC24A1O60721 1099 aa20.82■□□□□ 0.92
COL11A2-202ENST00000361917 ZBTB47Q9UFB7 747 aaPredicted RBP20.82■□□□□ 0.92
COL11A2-202ENST00000361917 GTF3C3Q9Y5Q9 886 aa20.8■□□□□ 0.92
COL11A2-202ENST00000361917 FBLN2P98095 1184 aa20.77■□□□□ 0.92
COL11A2-202ENST00000361917 CDK11AQ9UQ88 783 aaPredicted RBP20.75■□□□□ 0.91
COL11A2-202ENST00000361917 CANXP27824 592 aaKnown RBP20.74■□□□□ 0.91
COL11A2-202ENST00000361917 ABCC9O60706 1549 aa20.72■□□□□ 0.91
COL11A2-202ENST00000361917 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
COL11A2-202ENST00000361917 P3H3Q8IVL6 736 aa20.61■□□□□ 0.89
COL11A2-202ENST00000361917 NEFMP07197 916 aa20.56■□□□□ 0.88
COL11A2-202ENST00000361917 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
COL11A2-202ENST00000361917 NPM2Q86SE8 214 aaKnown RBP20.48■□□□□ 0.87
COL11A2-202ENST00000361917 ANP32AP39687 249 aaKnown RBP20.42■□□□□ 0.86
COL11A2-202ENST00000361917 ACIN1Q9UKV3 1341 aaKnown RBP20.42■□□□□ 0.86
COL11A2-202ENST00000361917 PLPPR3Q6T4P5 718 aa20.31■□□□□ 0.84
COL11A2-202ENST00000361917 CHGAP10645 457 aaKnown RBP20.3■□□□□ 0.84
COL11A2-202ENST00000361917 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
COL11A2-202ENST00000361917 ESF1Q9H501 851 aaKnown RBP20.25■□□□□ 0.83
COL11A2-202ENST00000361917 FKBP8Q14318 412 aa20.25■□□□□ 0.83
COL11A2-202ENST00000361917 STAG3Q9UJ98 1225 aa20.23■□□□□ 0.83
COL11A2-202ENST00000361917 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
COL11A2-202ENST00000361917 SALL2Q9Y467 1007 aaPredicted RBP20.2■□□□□ 0.82
COL11A2-202ENST00000361917 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
COL11A2-202ENST00000361917 TONSLQ96HA7 1378 aa20.19■□□□□ 0.82
COL11A2-202ENST00000361917 HNRNPUQ00839 825 aaKnown RBP eCLIP20.17■□□□□ 0.82
COL11A2-202ENST00000361917 ANP32BQ92688 251 aaKnown RBP20.17■□□□□ 0.82
COL11A2-202ENST00000361917 EIF5BO60841 1220 aaKnown RBP20.15■□□□□ 0.82
COL11A2-202ENST00000361917 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
COL11A2-202ENST00000361917 UPF2Q9HAU5 1272 aaKnown RBP20.11■□□□□ 0.81
COL11A2-202ENST00000361917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.8
COL11A2-202ENST00000361917 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
COL11A2-202ENST00000361917 ARXQ96QS3 562 aa20■□□□□ 0.79
COL11A2-202ENST00000361917 TMC1Q8TDI8 760 aa19.99■□□□□ 0.79
COL11A2-202ENST00000361917 NBR1Q14596 966 aa19.99■□□□□ 0.79
COL11A2-202ENST00000361917 NPM1P06748 294 aaKnown RBP eCLIP19.98■□□□□ 0.79
COL11A2-202ENST00000361917 CCDC136Q96JN2 1154 aa19.98■□□□□ 0.79
COL11A2-202ENST00000361917 KDM2AQ9Y2K7 1162 aa19.97■□□□□ 0.79
COL11A2-202ENST00000361917 WDR43Q15061 677 aaKnown RBP eCLIP19.96■□□□□ 0.79
COL11A2-202ENST00000361917 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
COL11A2-202ENST00000361917 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.93■□□□□ 0.78
COL11A2-202ENST00000361917 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
COL11A2-202ENST00000361917 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
COL11A2-202ENST00000361917 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.78
COL11A2-202ENST00000361917 MRS2Q9HD23 443 aa19.88■□□□□ 0.77
COL11A2-202ENST00000361917 A0A0G2JS52 829 aa19.86■□□□□ 0.77
COL11A2-202ENST00000361917 HIRIP3Q9BW71 556 aaPredicted RBP19.86■□□□□ 0.77
COL11A2-202ENST00000361917 PLEKHG5O94827 1062 aa19.85■□□□□ 0.77
COL11A2-202ENST00000361917 ZBTB7CA1YPR0 619 aa19.84■□□□□ 0.77
COL11A2-202ENST00000361917 TSPY4P0CV99 314 aa19.79■□□□□ 0.76
COL11A2-202ENST00000361917 TSPY10P0CW01 314 aa19.79■□□□□ 0.76
COL11A2-202ENST00000361917 MYH16Q9H6N6 1097 aa19.78■□□□□ 0.76
COL11A2-202ENST00000361917 MTUS2Q5JR59 1369 aa19.75■□□□□ 0.75
COL11A2-202ENST00000361917 C14orf37Q86TY3 774 aa19.74■□□□□ 0.75
COL11A2-202ENST00000361917 DCAF1Q9Y4B6 1507 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms