RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
PRDM2-203ENST00000343137 LCE6AA0A183 80 aa5.04□□□□□ -1.6
PRDM2-203ENST00000343137 COX6B2Q6YFQ2 88 aa5.04□□□□□ -1.6
PRDM2-203ENST00000343137 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
PRDM2-203ENST00000343137 SPINK7P58062 85 aa5.03□□□□□ -1.6
PRDM2-203ENST00000343137 A0A0D9SG42 100 aa5.02□□□□□ -1.61
PRDM2-203ENST00000343137 HECTD1Q9ULT8 2610 aa5.02□□□□□ -1.61
PRDM2-203ENST00000343137 KRTAP16-1A8MUX0 517 aa5.02□□□□□ -1.61
PRDM2-203ENST00000343137 BRCA2P51587 3418 aa5.01□□□□□ -1.61
PRDM2-203ENST00000343137 ZNF292O60281 2723 aa5.01□□□□□ -1.61
PRDM2-203ENST00000343137 PRAC1Q96KF2 57 aa5□□□□□ -1.61
PRDM2-203ENST00000343137 A0A0C4DFX4 3053 aa5□□□□□ -1.61
PRDM2-203ENST00000343137 ATRQ13535 2644 aa4.99□□□□□ -1.61
PRDM2-203ENST00000343137 Q6ZSA8 131 aa4.99□□□□□ -1.61
PRDM2-203ENST00000343137 S4R3F8 94 aa4.97□□□□□ -1.61
PRDM2-203ENST00000343137 LAMA3Q16787 3333 aa4.96□□□□□ -1.62
PRDM2-203ENST00000343137 CSAG1Q6PB30 78 aa4.95□□□□□ -1.62
PRDM2-203ENST00000343137 HELZ2Q9BYK8 2649 aaKnown RBP4.94□□□□□ -1.62
PRDM2-203ENST00000343137 MGAQ8IWI9 3026 aa4.94□□□□□ -1.62
PRDM2-203ENST00000343137 MKI67P46013 3256 aaKnown RBP4.94□□□□□ -1.62
PRDM2-203ENST00000343137 PANO1I0J062 215 aa4.94□□□□□ -1.62
PRDM2-203ENST00000343137 USP24Q9UPU5 2620 aa4.93□□□□□ -1.62
PRDM2-203ENST00000343137 KRTAP7-1Q8IUC3 87 aa4.93□□□□□ -1.62
PRDM2-203ENST00000343137 KRTAP10-1P60331 282 aa4.93□□□□□ -1.62
PRDM2-203ENST00000343137 CFAP46Q8IYW2 2715 aa4.92□□□□□ -1.62
PRDM2-203ENST00000343137 RANBP2P49792 3224 aaKnown RBP4.92□□□□□ -1.62
PRDM2-203ENST00000343137 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
PRDM2-203ENST00000343137 MGAM2Q2M2H8 2515 aa4.92□□□□□ -1.62
PRDM2-203ENST00000343137 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
PRDM2-203ENST00000343137 CFAP54Q96N23 3096 aa4.91□□□□□ -1.62
PRDM2-203ENST00000343137 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
PRDM2-203ENST00000343137 LAMA2P24043 3122 aaKnown RBP4.91□□□□□ -1.62
PRDM2-203ENST00000343137 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.62
PRDM2-203ENST00000343137 KRTAP13-1Q8IUC0 172 aa4.9□□□□□ -1.62
PRDM2-203ENST00000343137 KRTAP10-2P60368 255 aa4.9□□□□□ -1.62
PRDM2-203ENST00000343137 Q6ZRN7 208 aaPredicted RBP4.9□□□□□ -1.62
PRDM2-203ENST00000343137 RPL37P61927 97 aaKnown RBP4.89□□□□□ -1.63
PRDM2-203ENST00000343137 KRTAP11-1Q8IUC1 163 aa4.88□□□□□ -1.63
PRDM2-203ENST00000343137 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
PRDM2-203ENST00000343137 ROMO1P60602 79 aa4.88□□□□□ -1.63
PRDM2-203ENST00000343137 FLNBO75369 2602 aaKnown RBP4.87□□□□□ -1.63
PRDM2-203ENST00000343137 MAST4O15021 2626 aa4.87□□□□□ -1.63
PRDM2-203ENST00000343137 CHD6Q8TD26 2715 aa4.86□□□□□ -1.63
PRDM2-203ENST00000343137 A0A087X002 238 aa4.86□□□□□ -1.63
PRDM2-203ENST00000343137 NOTCH2NLQ7Z3S9 236 aa4.86□□□□□ -1.63
PRDM2-203ENST00000343137 A6NN06 94 aa4.85□□□□□ -1.63
PRDM2-203ENST00000343137 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
PRDM2-203ENST00000343137 GCN1Q92616 2671 aaKnown RBP4.84□□□□□ -1.63
PRDM2-203ENST00000343137 CENPEQ02224 2701 aa4.82□□□□□ -1.64
PRDM2-203ENST00000343137 USP34Q70CQ2 3546 aa4.81□□□□□ -1.64
PRDM2-203ENST00000343137 Q5VSD8 79 aa4.81□□□□□ -1.64
PRDM2-203ENST00000343137 TRIOO75962 3097 aa4.8□□□□□ -1.64
PRDM2-203ENST00000343137 R4GN34 69 aa4.8□□□□□ -1.64
PRDM2-203ENST00000343137 UNC79Q9P2D8 2635 aa4.79□□□□□ -1.64
PRDM2-203ENST00000343137 IGSF10Q6WRI0 2623 aa4.79□□□□□ -1.64
PRDM2-203ENST00000343137 TEX15Q9BXT5 2789 aa4.78□□□□□ -1.64
PRDM2-203ENST00000343137 KMT2BQ9UMN6 2715 aaPredicted RBP4.78□□□□□ -1.64
PRDM2-203ENST00000343137 FRYQ5TBA9 3013 aa4.77□□□□□ -1.65
PRDM2-203ENST00000343137 SETXQ7Z333 2677 aaKnown RBP4.77□□□□□ -1.65
PRDM2-203ENST00000343137 WDFY4Q6ZS81 3184 aa4.77□□□□□ -1.65
PRDM2-203ENST00000343137 KRTAP13-2Q52LG2 175 aa4.77□□□□□ -1.65
PRDM2-203ENST00000343137 TEP1Q99973 2627 aaKnown RBP4.76□□□□□ -1.65
PRDM2-203ENST00000343137 VPS13AQ96RL7 3174 aa4.74□□□□□ -1.65
PRDM2-203ENST00000343137 DSPP15924 2871 aaKnown RBP4.73□□□□□ -1.65
PRDM2-203ENST00000343137 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
PRDM2-203ENST00000343137 M0QZ58 72 aa4.72□□□□□ -1.65
PRDM2-203ENST00000343137 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
PRDM2-203ENST00000343137 NBEAL2Q6ZNJ1 2754 aa4.72□□□□□ -1.65
PRDM2-203ENST00000343137 UNC80Q8N2C7 3258 aa4.72□□□□□ -1.65
PRDM2-203ENST00000343137 CDH23Q9H251 3354 aa4.72□□□□□ -1.65
PRDM2-203ENST00000343137 EYSQ5T1H1 3165 aa4.71□□□□□ -1.65
PRDM2-203ENST00000343137 NBEAL1Q6ZS30 2694 aa4.71□□□□□ -1.66
PRDM2-203ENST00000343137 PRUNE2Q8WUY3 3088 aa4.71□□□□□ -1.66
PRDM2-203ENST00000343137 XIRP2A4UGR9 3374 aa4.68□□□□□ -1.66
PRDM2-203ENST00000343137 A8MUU9 505 aa4.68□□□□□ -1.66
PRDM2-203ENST00000343137 M0R2T5 61 aa4.67□□□□□ -1.66
PRDM2-203ENST00000343137 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
PRDM2-203ENST00000343137 C20orf166-AS1Q96NR2 134 aa4.67□□□□□ -1.66
PRDM2-203ENST00000343137 LAMA1P25391 3075 aa4.66□□□□□ -1.66
PRDM2-203ENST00000343137 KALRNO60229 2985 aa4.66□□□□□ -1.66
PRDM2-203ENST00000343137 COL6A5A8TX70 2615 aa4.65□□□□□ -1.66
PRDM2-203ENST00000343137 ITPR2Q14571 2701 aa4.65□□□□□ -1.66
PRDM2-203ENST00000343137 VCANP13611 3396 aa4.65□□□□□ -1.67
PRDM2-203ENST00000343137 A8MU10 97 aa4.65□□□□□ -1.67
PRDM2-203ENST00000343137 NSD1Q96L73 2696 aaPredicted RBP4.64□□□□□ -1.67
PRDM2-203ENST00000343137 MYO15AQ9UKN7 3530 aa4.64□□□□□ -1.67
PRDM2-203ENST00000343137 NOTCH1P46531 2555 aa4.64□□□□□ -1.67
PRDM2-203ENST00000343137 LRBAP50851 2863 aa4.62□□□□□ -1.67
PRDM2-203ENST00000343137 ITPR1Q14643 2758 aa4.61□□□□□ -1.67
PRDM2-203ENST00000343137 NBEAQ8NFP9 2946 aa4.61□□□□□ -1.67
PRDM2-203ENST00000343137 UBR5O95071 2799 aaPredicted RBP4.6□□□□□ -1.67
PRDM2-203ENST00000343137 DNAH14Q0VDD8 3507 aa4.6□□□□□ -1.67
PRDM2-203ENST00000343137 SZT2Q5T011 3432 aa4.6□□□□□ -1.67
PRDM2-203ENST00000343137 STAB1Q9NY15 2570 aa4.6□□□□□ -1.67
PRDM2-203ENST00000343137 KRTAP21-3Q3LHN1 58 aa4.6□□□□□ -1.67
PRDM2-203ENST00000343137 UTP20O75691 2785 aaKnown RBP4.59□□□□□ -1.67
PRDM2-203ENST00000343137 ADGRG4Q8IZF6 3080 aa4.59□□□□□ -1.68
PRDM2-203ENST00000343137 CELSR3Q9NYQ7 3312 aa4.58□□□□□ -1.68
PRDM2-203ENST00000343137 KRTAP1-4P0C5Y4 121 aa4.58□□□□□ -1.68
PRDM2-203ENST00000343137 PLAC4Q8WY50 150 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms