RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 A0A0D9SG42 100 aa10.4□□□□□ -0.74
DUSP4-201ENST00000240100 USP24Q9UPU5 2620 aa10.39□□□□□ -0.75
DUSP4-201ENST00000240100 MGAM2Q2M2H8 2515 aa10.39□□□□□ -0.75
DUSP4-201ENST00000240100 A0A0C4DFX4 3053 aa10.38□□□□□ -0.75
DUSP4-201ENST00000240100 RANBP2P49792 3224 aaKnown RBP10.38□□□□□ -0.75
DUSP4-201ENST00000240100 MKI67P46013 3256 aaKnown RBP10.36□□□□□ -0.75
DUSP4-201ENST00000240100 KRTAP29-1A8MX34 341 aaPredicted RBP10.32□□□□□ -0.76
DUSP4-201ENST00000240100 Q6ZR54 194 aa10.32□□□□□ -0.76
DUSP4-201ENST00000240100 ATRQ13535 2644 aa10.3□□□□□ -0.76
DUSP4-201ENST00000240100 SPINK7P58062 85 aa10.29□□□□□ -0.76
DUSP4-201ENST00000240100 DMAC1Q96GE9 116 aa10.26□□□□□ -0.77
DUSP4-201ENST00000240100 MAST4O15021 2626 aa10.26□□□□□ -0.77
DUSP4-201ENST00000240100 Q6ZSA8 131 aa10.25□□□□□ -0.77
DUSP4-201ENST00000240100 MGAQ8IWI9 3026 aa10.24□□□□□ -0.77
DUSP4-201ENST00000240100 LINC01554Q52M75 96 aa10.24□□□□□ -0.77
DUSP4-201ENST00000240100 CFAP54Q96N23 3096 aa10.23□□□□□ -0.77
DUSP4-201ENST00000240100 S4R3F8 94 aa10.19□□□□□ -0.78
DUSP4-201ENST00000240100 LAMA3Q16787 3333 aa10.18□□□□□ -0.78
DUSP4-201ENST00000240100 PANO1I0J062 215 aa10.17□□□□□ -0.78
DUSP4-201ENST00000240100 AKAP13Q12802 2813 aa10.16□□□□□ -0.78
DUSP4-201ENST00000240100 LCE6AA0A183 80 aa10.16□□□□□ -0.78
DUSP4-201ENST00000240100 PRAC1Q96KF2 57 aa10.16□□□□□ -0.78
DUSP4-201ENST00000240100 KRTAP10-1P60331 282 aa10.14□□□□□ -0.79
DUSP4-201ENST00000240100 CENPEQ02224 2701 aa10.13□□□□□ -0.79
DUSP4-201ENST00000240100 BRCA2P51587 3418 aa10.13□□□□□ -0.79
DUSP4-201ENST00000240100 IGSF10Q6WRI0 2623 aa10.11□□□□□ -0.79
DUSP4-201ENST00000240100 KRTAP10-2P60368 255 aa10.11□□□□□ -0.79
DUSP4-201ENST00000240100 CSAG1Q6PB30 78 aa10.11□□□□□ -0.79
DUSP4-201ENST00000240100 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
DUSP4-201ENST00000240100 LAMA2P24043 3122 aaKnown RBP10.08□□□□□ -0.8
DUSP4-201ENST00000240100 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
DUSP4-201ENST00000240100 UNC79Q9P2D8 2635 aa10.06□□□□□ -0.8
DUSP4-201ENST00000240100 KRTAP11-1Q8IUC1 163 aa10.04□□□□□ -0.8
DUSP4-201ENST00000240100 H1FX-AS1Q4G0G2 97 aa10.02□□□□□ -0.81
DUSP4-201ENST00000240100 BAHCC1Q9P281 2608 aa10.02□□□□□ -0.81
DUSP4-201ENST00000240100 TRIOO75962 3097 aa10.01□□□□□ -0.81
DUSP4-201ENST00000240100 LUZP6Q538Z0 58 aa10□□□□□ -0.81
DUSP4-201ENST00000240100 Q6ZRN7 208 aaPredicted RBP10□□□□□ -0.81
DUSP4-201ENST00000240100 CHD6Q8TD26 2715 aa10□□□□□ -0.81
DUSP4-201ENST00000240100 CAMK2N1Q7Z7J9 78 aa9.99□□□□□ -0.81
DUSP4-201ENST00000240100 A0A087X002 238 aa9.99□□□□□ -0.81
DUSP4-201ENST00000240100 NOTCH2NLQ7Z3S9 236 aa9.99□□□□□ -0.81
DUSP4-201ENST00000240100 GCN1Q92616 2671 aaKnown RBP9.98□□□□□ -0.81
DUSP4-201ENST00000240100 RPL37P61927 97 aaKnown RBP9.97□□□□□ -0.81
DUSP4-201ENST00000240100 KRTAP13-1Q8IUC0 172 aa9.96□□□□□ -0.81
DUSP4-201ENST00000240100 WDFY4Q6ZS81 3184 aa9.96□□□□□ -0.82
DUSP4-201ENST00000240100 TEP1Q99973 2627 aaKnown RBP9.95□□□□□ -0.82
DUSP4-201ENST00000240100 UNC80Q8N2C7 3258 aa9.95□□□□□ -0.82
DUSP4-201ENST00000240100 DSPP15924 2871 aaKnown RBP9.95□□□□□ -0.82
DUSP4-201ENST00000240100 KRTAP21-3Q3LHN1 58 aa9.95□□□□□ -0.82
DUSP4-201ENST00000240100 ROMO1P60602 79 aa9.94□□□□□ -0.82
DUSP4-201ENST00000240100 SPATA8Q6RVD6 105 aa9.94□□□□□ -0.82
DUSP4-201ENST00000240100 RPS29P62273 56 aaKnown RBP9.93□□□□□ -0.82
DUSP4-201ENST00000240100 Q5VSD8 79 aa9.92□□□□□ -0.82
DUSP4-201ENST00000240100 PRUNE2Q8WUY3 3088 aa9.91□□□□□ -0.82
DUSP4-201ENST00000240100 CDH23Q9H251 3354 aa9.9□□□□□ -0.82
DUSP4-201ENST00000240100 TEX15Q9BXT5 2789 aa9.89□□□□□ -0.83
DUSP4-201ENST00000240100 COL6A5A8TX70 2615 aa9.88□□□□□ -0.83
DUSP4-201ENST00000240100 FRYQ5TBA9 3013 aa9.88□□□□□ -0.83
DUSP4-201ENST00000240100 SEC61BP60468 96 aaKnown RBP9.86□□□□□ -0.83
DUSP4-201ENST00000240100 R4GN34 69 aa9.86□□□□□ -0.83
DUSP4-201ENST00000240100 A6NN06 94 aa9.85□□□□□ -0.83
DUSP4-201ENST00000240100 VPS13AQ96RL7 3174 aa9.85□□□□□ -0.83
DUSP4-201ENST00000240100 SETXQ7Z333 2677 aaKnown RBP9.82□□□□□ -0.84
DUSP4-201ENST00000240100 STAB1Q9NY15 2570 aa9.8□□□□□ -0.84
DUSP4-201ENST00000240100 H3BS24 57 aa9.78□□□□□ -0.84
DUSP4-201ENST00000240100 KRTAP13-2Q52LG2 175 aa9.77□□□□□ -0.85
DUSP4-201ENST00000240100 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
DUSP4-201ENST00000240100 XIRP2A4UGR9 3374 aa9.76□□□□□ -0.85
DUSP4-201ENST00000240100 ADM2Q7Z4H4 148 aa9.72□□□□□ -0.85
DUSP4-201ENST00000240100 M0QZ58 72 aa9.72□□□□□ -0.85
DUSP4-201ENST00000240100 M0R2T5 61 aa9.71□□□□□ -0.86
DUSP4-201ENST00000240100 NBEAL1Q6ZS30 2694 aa9.71□□□□□ -0.86
DUSP4-201ENST00000240100 DNAH14Q0VDD8 3507 aa9.7□□□□□ -0.86
DUSP4-201ENST00000240100 LAMA1P25391 3075 aa9.7□□□□□ -0.86
DUSP4-201ENST00000240100 TNRC18O15417 2968 aaPredicted RBP9.68□□□□□ -0.86
DUSP4-201ENST00000240100 SZT2Q5T011 3432 aa9.67□□□□□ -0.86
DUSP4-201ENST00000240100 CELSR3Q9NYQ7 3312 aa9.65□□□□□ -0.86
DUSP4-201ENST00000240100 ITPR2Q14571 2701 aa9.65□□□□□ -0.87
DUSP4-201ENST00000240100 KMT2BQ9UMN6 2715 aaPredicted RBP9.64□□□□□ -0.87
DUSP4-201ENST00000240100 KALRNO60229 2985 aa9.64□□□□□ -0.87
DUSP4-201ENST00000240100 NOTCH1P46531 2555 aa9.62□□□□□ -0.87
DUSP4-201ENST00000240100 VCANP13611 3396 aa9.62□□□□□ -0.87
DUSP4-201ENST00000240100 KRTAP25-1Q3LHN0 102 aa9.61□□□□□ -0.87
DUSP4-201ENST00000240100 A0A0A0MQY5 61 aa9.58□□□□□ -0.88
DUSP4-201ENST00000240100 LRBAP50851 2863 aa9.57□□□□□ -0.88
DUSP4-201ENST00000240100 A8MU10 97 aa9.56□□□□□ -0.88
DUSP4-201ENST00000240100 FLNCQ14315 2725 aa9.55□□□□□ -0.88
DUSP4-201ENST00000240100 MAP1AP78559 2803 aaPredicted RBP9.54□□□□□ -0.88
DUSP4-201ENST00000240100 NBEAQ8NFP9 2946 aa9.54□□□□□ -0.88
DUSP4-201ENST00000240100 UBR5O95071 2799 aaPredicted RBP9.53□□□□□ -0.88
DUSP4-201ENST00000240100 ITPR1Q14643 2758 aa9.52□□□□□ -0.89
DUSP4-201ENST00000240100 A8MUU9 505 aa9.5□□□□□ -0.89
DUSP4-201ENST00000240100 NSD1Q96L73 2696 aaPredicted RBP9.49□□□□□ -0.89
DUSP4-201ENST00000240100 COL6A3P12111 3177 aa9.49□□□□□ -0.89
DUSP4-201ENST00000240100 ADGRG4Q8IZF6 3080 aa9.49□□□□□ -0.89
DUSP4-201ENST00000240100 ATMQ13315 3056 aa9.49□□□□□ -0.89
DUSP4-201ENST00000240100 C20orf166-AS1Q96NR2 134 aa9.48□□□□□ -0.89
DUSP4-201ENST00000240100 UTP20O75691 2785 aaKnown RBP9.46□□□□□ -0.9
DUSP4-201ENST00000240100 HIVEP1P15822 2718 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms