RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 USP24Q9UPU5 2620 aa7.74□□□□□ -1.17
DDX17-201ENST00000216019 MKI67P46013 3256 aaKnown RBP7.74□□□□□ -1.17
DDX17-201ENST00000216019 Q5VSD8 79 aa7.74□□□□□ -1.17
DDX17-201ENST00000216019 FP248Q71RG6 208 aaPredicted RBP7.72□□□□□ -1.17
DDX17-201ENST00000216019 SPINK7P58062 85 aa7.72□□□□□ -1.17
DDX17-201ENST00000216019 CSAG1Q6PB30 78 aa7.71□□□□□ -1.18
DDX17-201ENST00000216019 PANO1I0J062 215 aa7.7□□□□□ -1.18
DDX17-201ENST00000216019 LINC00483Q53H64 154 aa7.7□□□□□ -1.18
DDX17-201ENST00000216019 MGAM2Q2M2H8 2515 aa7.7□□□□□ -1.18
DDX17-201ENST00000216019 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
DDX17-201ENST00000216019 Q5VV11 94 aa7.68□□□□□ -1.18
DDX17-201ENST00000216019 LCE6AA0A183 80 aa7.67□□□□□ -1.18
DDX17-201ENST00000216019 KRTAP4-16G5E9R7 235 aaPredicted RBP7.65□□□□□ -1.18
DDX17-201ENST00000216019 RANBP2P49792 3224 aaKnown RBP7.64□□□□□ -1.19
DDX17-201ENST00000216019 LAMA3Q16787 3333 aa7.64□□□□□ -1.19
DDX17-201ENST00000216019 TRANK1O15050 2925 aa7.63□□□□□ -1.19
DDX17-201ENST00000216019 PRAC1Q96KF2 57 aa7.63□□□□□ -1.19
DDX17-201ENST00000216019 ATRQ13535 2644 aa7.62□□□□□ -1.19
DDX17-201ENST00000216019 HELZ2Q9BYK8 2649 aaKnown RBP7.61□□□□□ -1.19
DDX17-201ENST00000216019 LUZP6Q538Z0 58 aa7.61□□□□□ -1.19
DDX17-201ENST00000216019 BRCA2P51587 3418 aa7.59□□□□□ -1.19
DDX17-201ENST00000216019 SEC61BP60468 96 aaKnown RBP7.58□□□□□ -1.2
DDX17-201ENST00000216019 OXTP01178 125 aa7.58□□□□□ -1.2
DDX17-201ENST00000216019 Q6ZR54 194 aa7.58□□□□□ -1.2
DDX17-201ENST00000216019 R4GN34 69 aa7.57□□□□□ -1.2
DDX17-201ENST00000216019 A0A087X002 238 aa7.56□□□□□ -1.2
DDX17-201ENST00000216019 CFAP54Q96N23 3096 aa7.56□□□□□ -1.2
DDX17-201ENST00000216019 MGAQ8IWI9 3026 aa7.56□□□□□ -1.2
DDX17-201ENST00000216019 CFAP46Q8IYW2 2715 aa7.54□□□□□ -1.2
DDX17-201ENST00000216019 KRTAP11-1Q8IUC1 163 aa7.53□□□□□ -1.2
DDX17-201ENST00000216019 KRTAP29-1A8MX34 341 aaPredicted RBP7.53□□□□□ -1.2
DDX17-201ENST00000216019 MAST4O15021 2626 aa7.52□□□□□ -1.21
DDX17-201ENST00000216019 AKAP13Q12802 2813 aa7.51□□□□□ -1.21
DDX17-201ENST00000216019 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
DDX17-201ENST00000216019 NOTCH2NLQ7Z3S9 236 aa7.5□□□□□ -1.21
DDX17-201ENST00000216019 A0A0C4DFX4 3053 aa7.48□□□□□ -1.21
DDX17-201ENST00000216019 M0QZ58 72 aa7.47□□□□□ -1.21
DDX17-201ENST00000216019 RPL37P61927 97 aaKnown RBP7.47□□□□□ -1.21
DDX17-201ENST00000216019 KRTAP7-1Q8IUC3 87 aa7.46□□□□□ -1.21
DDX17-201ENST00000216019 Q6ZRN7 208 aaPredicted RBP7.46□□□□□ -1.22
DDX17-201ENST00000216019 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
DDX17-201ENST00000216019 UNC80Q8N2C7 3258 aa7.45□□□□□ -1.22
DDX17-201ENST00000216019 CDH23Q9H251 3354 aa7.45□□□□□ -1.22
DDX17-201ENST00000216019 SPATA8Q6RVD6 105 aa7.45□□□□□ -1.22
DDX17-201ENST00000216019 ROMO1P60602 79 aa7.44□□□□□ -1.22
DDX17-201ENST00000216019 TRIOO75962 3097 aa7.43□□□□□ -1.22
DDX17-201ENST00000216019 ZNF292O60281 2723 aa7.41□□□□□ -1.22
DDX17-201ENST00000216019 LAMA2P24043 3122 aaKnown RBP7.41□□□□□ -1.22
DDX17-201ENST00000216019 WDFY4Q6ZS81 3184 aa7.4□□□□□ -1.23
DDX17-201ENST00000216019 PRUNE2Q8WUY3 3088 aa7.4□□□□□ -1.23
DDX17-201ENST00000216019 XIRP2A4UGR9 3374 aa7.37□□□□□ -1.23
DDX17-201ENST00000216019 CENPEQ02224 2701 aa7.37□□□□□ -1.23
DDX17-201ENST00000216019 ASB16-AS1Q495Z4 193 aa7.36□□□□□ -1.23
DDX17-201ENST00000216019 CHD6Q8TD26 2715 aa7.34□□□□□ -1.23
DDX17-201ENST00000216019 KRTAP13-2Q52LG2 175 aa7.34□□□□□ -1.23
DDX17-201ENST00000216019 RPS29P62273 56 aaKnown RBP7.32□□□□□ -1.24
DDX17-201ENST00000216019 KRTAP13-1Q8IUC0 172 aa7.32□□□□□ -1.24
DDX17-201ENST00000216019 TEX15Q9BXT5 2789 aa7.3□□□□□ -1.24
DDX17-201ENST00000216019 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
DDX17-201ENST00000216019 GCN1Q92616 2671 aaKnown RBP7.29□□□□□ -1.24
DDX17-201ENST00000216019 DNAH14Q0VDD8 3507 aa7.29□□□□□ -1.24
DDX17-201ENST00000216019 CELSR3Q9NYQ7 3312 aa7.26□□□□□ -1.25
DDX17-201ENST00000216019 STAB1Q9NY15 2570 aa7.26□□□□□ -1.25
DDX17-201ENST00000216019 SZT2Q5T011 3432 aa7.26□□□□□ -1.25
DDX17-201ENST00000216019 IGSF10Q6WRI0 2623 aa7.25□□□□□ -1.25
DDX17-201ENST00000216019 H3BS24 57 aa7.25□□□□□ -1.25
DDX17-201ENST00000216019 DSPP15924 2871 aaKnown RBP7.24□□□□□ -1.25
DDX17-201ENST00000216019 A8MU10 97 aa7.24□□□□□ -1.25
DDX17-201ENST00000216019 TEP1Q99973 2627 aaKnown RBP7.24□□□□□ -1.25
DDX17-201ENST00000216019 FRYQ5TBA9 3013 aa7.22□□□□□ -1.25
DDX17-201ENST00000216019 SETXQ7Z333 2677 aaKnown RBP7.22□□□□□ -1.25
DDX17-201ENST00000216019 VPS13AQ96RL7 3174 aa7.21□□□□□ -1.26
DDX17-201ENST00000216019 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
DDX17-201ENST00000216019 NBEAL2Q6ZNJ1 2754 aa7.19□□□□□ -1.26
DDX17-201ENST00000216019 UNC79Q9P2D8 2635 aa7.19□□□□□ -1.26
DDX17-201ENST00000216019 NBEAL1Q6ZS30 2694 aa7.18□□□□□ -1.26
DDX17-201ENST00000216019 A8MUU9 505 aa7.18□□□□□ -1.26
DDX17-201ENST00000216019 COL6A5A8TX70 2615 aa7.18□□□□□ -1.26
DDX17-201ENST00000216019 VCANP13611 3396 aa7.16□□□□□ -1.26
DDX17-201ENST00000216019 COL6A3P12111 3177 aa7.14□□□□□ -1.27
DDX17-201ENST00000216019 A6NN06 94 aa7.13□□□□□ -1.27
DDX17-201ENST00000216019 SPTBN5Q9NRC6 3674 aaKnown RBP7.11□□□□□ -1.27
DDX17-201ENST00000216019 LAMA1P25391 3075 aa7.1□□□□□ -1.27
DDX17-201ENST00000216019 BAHCC1Q9P281 2608 aa7.1□□□□□ -1.27
DDX17-201ENST00000216019 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
DDX17-201ENST00000216019 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
DDX17-201ENST00000216019 NOTCH1P46531 2555 aa7.07□□□□□ -1.28
DDX17-201ENST00000216019 KALRNO60229 2985 aa7.05□□□□□ -1.28
DDX17-201ENST00000216019 ITPR2Q14571 2701 aa7.04□□□□□ -1.28
DDX17-201ENST00000216019 LRBAP50851 2863 aa7.04□□□□□ -1.28
DDX17-201ENST00000216019 MAP1AP78559 2803 aaPredicted RBP7.04□□□□□ -1.28
DDX17-201ENST00000216019 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
DDX17-201ENST00000216019 FREM2Q5SZK8 3169 aa7.03□□□□□ -1.28
DDX17-201ENST00000216019 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
DDX17-201ENST00000216019 ATMQ13315 3056 aa7.01□□□□□ -1.29
DDX17-201ENST00000216019 UBR5O95071 2799 aaPredicted RBP7□□□□□ -1.29
DDX17-201ENST00000216019 ITPR1Q14643 2758 aa6.97□□□□□ -1.29
DDX17-201ENST00000216019 KRTAP1-4P0C5Y4 121 aa6.97□□□□□ -1.29
DDX17-201ENST00000216019 BOD1L1Q8NFC6 3051 aa6.96□□□□□ -1.3
DDX17-201ENST00000216019 DMBT1Q9UGM3 2413 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms