RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
DDX17-201ENST00000216019 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
DDX17-201ENST00000216019 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
DDX17-201ENST00000216019 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
DDX17-201ENST00000216019 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
DDX17-201ENST00000216019 APLP2Q06481 763 aa20.32■□□□□ 0.84
DDX17-201ENST00000216019 FAM9AQ8IZU1 332 aaPredicted RBP20.29■□□□□ 0.84
DDX17-201ENST00000216019 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
DDX17-201ENST00000216019 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
DDX17-201ENST00000216019 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
DDX17-201ENST00000216019 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
DDX17-201ENST00000216019 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
DDX17-201ENST00000216019 ATP1B4Q9UN42 357 aaPredicted RBP19.73■□□□□ 0.75
DDX17-201ENST00000216019 CCER1Q8TC90 406 aaPredicted RBP19.68■□□□□ 0.74
DDX17-201ENST00000216019 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
DDX17-201ENST00000216019 ZEB1P37275 1124 aaPredicted RBP19.6■□□□□ 0.73
DDX17-201ENST00000216019 CENPBP07199 599 aaPredicted RBP19.53■□□□□ 0.72
DDX17-201ENST00000216019 PPARGC1BQ86YN6 1023 aaKnown RBP19.43■□□□□ 0.7
DDX17-201ENST00000216019 ERICH6Q7L0X2 663 aa19.38■□□□□ 0.69
DDX17-201ENST00000216019 YTHDC1Q96MU7 727 aaKnown RBP19.32■□□□□ 0.68
DDX17-201ENST00000216019 TRIM26Q12899 539 aaPredicted RBP19.15■□□□□ 0.66
DDX17-201ENST00000216019 NEFLP07196 543 aa19.15■□□□□ 0.66
DDX17-201ENST00000216019 ITGAEP38570 1179 aa19.07■□□□□ 0.64
DDX17-201ENST00000216019 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
DDX17-201ENST00000216019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.99■□□□□ 0.63
DDX17-201ENST00000216019 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
DDX17-201ENST00000216019 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
DDX17-201ENST00000216019 MYT1LQ9UL68 1186 aa18.93■□□□□ 0.62
DDX17-201ENST00000216019 HRCP23327 699 aa18.91■□□□□ 0.62
DDX17-201ENST00000216019 POLR3GLQ9BT43 218 aa18.91■□□□□ 0.62
DDX17-201ENST00000216019 CNGB1Q14028 1251 aaPredicted RBP18.75■□□□□ 0.59
DDX17-201ENST00000216019 ABCC9O60706 1549 aa18.69■□□□□ 0.58
DDX17-201ENST00000216019 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
DDX17-201ENST00000216019 FAM50AQ14320 339 aaKnown RBP18.58■□□□□ 0.57
DDX17-201ENST00000216019 DAXXQ9UER7 740 aaPredicted RBP18.58■□□□□ 0.56
DDX17-201ENST00000216019 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
DDX17-201ENST00000216019 MYT1Q01538 1121 aa18.51■□□□□ 0.55
DDX17-201ENST00000216019 DIEXFQ68CQ4 756 aaKnown RBP18.49■□□□□ 0.55
DDX17-201ENST00000216019 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
DDX17-201ENST00000216019 NEUROD1Q13562 356 aa18.43■□□□□ 0.54
DDX17-201ENST00000216019 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
DDX17-201ENST00000216019 FBLN2P98095 1184 aa18.26■□□□□ 0.51
DDX17-201ENST00000216019 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
DDX17-201ENST00000216019 ZNF316A6NFI3 1004 aaPredicted RBP18.2■□□□□ 0.5
DDX17-201ENST00000216019 BCANQ96GW7 911 aa18.19■□□□□ 0.5
DDX17-201ENST00000216019 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
DDX17-201ENST00000216019 ARID3CA6NKF2 412 aa18.16■□□□□ 0.5
DDX17-201ENST00000216019 ANP32CO43423 234 aa18.15■□□□□ 0.5
DDX17-201ENST00000216019 RTL5Q5HYW3 569 aaPredicted RBP18.11■□□□□ 0.49
DDX17-201ENST00000216019 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
DDX17-201ENST00000216019 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
DDX17-201ENST00000216019 CSRNP3Q8WYN3 585 aa18.07■□□□□ 0.48
DDX17-201ENST00000216019 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
DDX17-201ENST00000216019 CDK11AQ9UQ88 783 aaPredicted RBP17.94■□□□□ 0.46
DDX17-201ENST00000216019 CANXP27824 592 aaKnown RBP17.9■□□□□ 0.46
DDX17-201ENST00000216019 ZCCHC6Q5VYS8 1495 aaKnown RBP17.88■□□□□ 0.45
DDX17-201ENST00000216019 SLC24A1O60721 1099 aa17.88■□□□□ 0.45
DDX17-201ENST00000216019 BCL11AQ9H165 835 aa17.88■□□□□ 0.45
DDX17-201ENST00000216019 ZBTB47Q9UFB7 747 aaPredicted RBP17.88■□□□□ 0.45
DDX17-201ENST00000216019 ACIN1Q9UKV3 1341 aaKnown RBP17.8■□□□□ 0.44
DDX17-201ENST00000216019 NEFMP07197 916 aa17.77■□□□□ 0.44
DDX17-201ENST00000216019 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
DDX17-201ENST00000216019 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
DDX17-201ENST00000216019 CHGAP10645 457 aaKnown RBP17.69■□□□□ 0.42
DDX17-201ENST00000216019 CHIC2Q9UKJ5 165 aa17.67■□□□□ 0.42
DDX17-201ENST00000216019 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
DDX17-201ENST00000216019 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
DDX17-201ENST00000216019 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
DDX17-201ENST00000216019 FKBP8Q14318 412 aa17.63■□□□□ 0.41
DDX17-201ENST00000216019 ESF1Q9H501 851 aaKnown RBP17.63■□□□□ 0.41
DDX17-201ENST00000216019 ANP32AP39687 249 aaKnown RBP17.62■□□□□ 0.41
DDX17-201ENST00000216019 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
DDX17-201ENST00000216019 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
DDX17-201ENST00000216019 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
DDX17-201ENST00000216019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.412e-13■■■□□ 16.6
DDX17-201ENST00000216019 HNRNPUQ00839 825 aaKnown RBP eCLIP17.59■□□□□ 0.41
DDX17-201ENST00000216019 SALL2Q9Y467 1007 aaPredicted RBP17.55■□□□□ 0.4
DDX17-201ENST00000216019 NPM1P06748 294 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX17-201ENST00000216019 MTUS2Q5JR59 1369 aa17.5■□□□□ 0.39
DDX17-201ENST00000216019 KDM2AQ9Y2K7 1162 aa17.49■□□□□ 0.39
DDX17-201ENST00000216019 CLIP1P30622 1438 aa17.49■□□□□ 0.39
DDX17-201ENST00000216019 MYO15BQ96JP2 1530 aa17.45■□□□□ 0.38
DDX17-201ENST00000216019 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
DDX17-201ENST00000216019 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
DDX17-201ENST00000216019 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
DDX17-201ENST00000216019 HIRIP3Q9BW71 556 aaPredicted RBP17.44■□□□□ 0.38
DDX17-201ENST00000216019 TSPY4P0CV99 314 aa17.43■□□□□ 0.38
DDX17-201ENST00000216019 TSPY10P0CW01 314 aa17.43■□□□□ 0.38
DDX17-201ENST00000216019 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
DDX17-201ENST00000216019 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
DDX17-201ENST00000216019 MRS2Q9HD23 443 aa17.38■□□□□ 0.37
DDX17-201ENST00000216019 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
DDX17-201ENST00000216019 RSF1Q96T23 1441 aaPredicted RBP17.37■□□□□ 0.37
DDX17-201ENST00000216019 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
DDX17-201ENST00000216019 MIER1Q8N108 512 aa17.36■□□□□ 0.37
DDX17-201ENST00000216019 CEP162Q5TB80 1403 aa17.36■□□□□ 0.37
DDX17-201ENST00000216019 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
DDX17-201ENST00000216019 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
DDX17-201ENST00000216019 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
DDX17-201ENST00000216019 IRX6P78412 446 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms