RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Lrcol1Q3URS3 161 aa9.99□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 GlrxQ9QUH0 107 aa9.99□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Ighv1-36A0A0A6YXT2 117 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Amn1B8JKV0 258 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Eid2bE9Q2Y0 151 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Id3P41133 119 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Neurog3P70661 214 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 TncQ80YX1 2110 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Prr3Q811B5 190 aaKnown RBP9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Lypd1Q8BLC3 141 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Tomm7Q9D173 55 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Zc2hc1aQ8BJH1 324 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Gm15091B1AZM2 449 aa9.98□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Arap2Q8BZ05 1703 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Trav9-1A0A075B601 112 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Ighv5-12-4A0A0A6YWG4 117 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Shisal2aA2A9G7 189 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Klf14Q19A41 325 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Zg16Q8K0C5 167 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Cxcl10P17515 98 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Zglp1Q1WG82 266 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 1700001C19RikQ8K168 210 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Dock7Q8R1A4 2130 aaKnown RBP9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Scn11aQ9R053 1765 aa9.97□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Ly86O88188 162 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 LeprotO89013 131 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Tpsab1Q02844 273 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Rbmy1bQ60990 380 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 LenepQ9WVB6 61 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Pom121l2Q5SW25 972 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Gm26558Q8BLW8 286 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Pmaip1Q9JM54 103 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Trav14n-2A0A0G2JDF5 121 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Wfdc2Q9DAU7 174 aa9.96□□□□□ -0.81
Pcdhac1-201ENSMUST00000007584 Gbf1Q6DFZ1 1861 aa9.96□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Zfp407G3UVV3 2246 aa9.96□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Igkv4-68A0A0B4J1I7 117 aa9.96□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Igkv6-14A0A140T8P1 115 aa9.96□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Tomm6Q9CQN3 74 aa9.96□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Gm4792Q569Q2 183 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Timm21Q8CCM6 249 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Igkv13-84A0A140T8N3 115 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Gata1P17679 413 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Tmem190Q9D2E9 166 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Trav7-1A0A0G2JEV5 112 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Igkv14-130A0A0G2JF45 117 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 A930003A15RikQ3U552 87 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 PinlypQ9CQD7 212 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 PatjQ63ZW7 1834 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Trav6-6A0A075B603 114 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Trav14d-3-dv8A0A075B619 120 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Trav9d-1A0A075B699 112 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Ighv8-8A0A0A6YXQ0 119 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Igh-VJ558P01758 117 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 P01794 123 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Ube2d2bQ6ZWY6 147 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Gm5105Q8C6Y9 112 aa9.95□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Tmem219Q9D123 240 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Zdbf2Q5SS00 2493 aaKnown RBP9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Megf6Q80V70 1572 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 P01657 111 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Gm21976J3QNN2 249 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Cox6a1P43024 111 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Sptan1P16546 2472 aaKnown RBP9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 P01726 129 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 P01793 123 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 NpsP0C0P8 89 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Gm10803Q3TZS6 135 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Mustn1Q99JI1 82 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Lamb2Q61292 1799 aa9.94□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Ighv1-18A0A0A6YXN4 117 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Gm20219A0A1B0GRQ3 87 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Gm9513B3GLJ6 99 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 eef1akmt3D3YWP0 232 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Lynx1P0DP60 116 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 H1fxQ80ZM5 188 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Rnf144bQ8BKD6 301 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Ly6g5bQ8K1T4 194 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Dennd4aE9Q8V6 1869 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Ltbp4Q8K4G1 1666 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Ighv1-7A0A075B5T7 117 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 P01789 122 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Q8C708 225 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Pkd1l3Q2EG98 2201 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Arfgef1G3X9K3 1846 aaKnown RBP9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Taf1Q80UV9 1891 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Ighv1-49A0A0A6YWX2 117 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Zcchc24B2RVL6 241 aaKnown RBP9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Lect2O88803 151 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 P03980 138 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Asphd1Q2TA57 360 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Pfn2Q9JJV2 140 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Dicer1Q8R418 1916 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Foxc1Q61572 553 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Rasl10aQ8K5A4 203 aa9.93□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Tmem86bQ497J1 226 aa9.92□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Brwd3A2AHJ4 1799 aa9.92□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Prpf8Q99PV0 2335 aaKnown RBP9.92□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 E130218I03RikA0A0U1RNU5 63 aa9.92□□□□□ -0.82
Pcdhac1-201ENSMUST00000007584 Slc25a48Q8BW66 306 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 66.1 ms