Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Gm25239-201ENSMUST00000174915 86 ntBASIC34.81■■■■□ 3.16
Pkd1l3Q2EG98 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Pkd1l3Q2EG98 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Pkd1l3Q2EG98 Gm24109-201ENSMUST00000175489 103 ntBASIC30.24■■■□□ 2.43
Pkd1l3Q2EG98 Gm15042-201ENSMUST00000120212 883 ntBASIC30.23■■■□□ 2.43
Pkd1l3Q2EG98 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Pkd1l3Q2EG98 Gm15045-201ENSMUST00000117359 883 ntBASIC29.75■■■□□ 2.35
Pkd1l3Q2EG98 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Pkd1l3Q2EG98 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Pkd1l3Q2EG98 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pkd1l3Q2EG98 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Pkd1l3Q2EG98 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Pkd1l3Q2EG98 Gm23366-201ENSMUST00000175022 89 ntBASIC28.9■■■□□ 2.22
Pkd1l3Q2EG98 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Pkd1l3Q2EG98 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pkd1l3Q2EG98 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.2■■■□□ 2.11
Pkd1l3Q2EG98 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Pkd1l3Q2EG98 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.16■■■□□ 2.1
Pkd1l3Q2EG98 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28■■■□□ 2.07
Pkd1l3Q2EG98 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pkd1l3Q2EG98 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Pkd1l3Q2EG98 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Pkd1l3Q2EG98 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.77■■■□□ 2.04
Pkd1l3Q2EG98 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
Pkd1l3Q2EG98 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pkd1l3Q2EG98 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Pkd1l3Q2EG98 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pkd1l3Q2EG98 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.64■■■□□ 2.02
Pkd1l3Q2EG98 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Pkd1l3Q2EG98 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pkd1l3Q2EG98 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pkd1l3Q2EG98 Psd-208ENSMUST00000224556 2034 ntBASIC27.53■■■□□ 2
Pkd1l3Q2EG98 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pkd1l3Q2EG98 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pkd1l3Q2EG98 Gm25238-201ENSMUST00000174914 89 ntBASIC27.49■■□□□ 1.99
Pkd1l3Q2EG98 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Pkd1l3Q2EG98 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.44■■□□□ 1.98
Pkd1l3Q2EG98 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.07■■□□□ 1.92
Pkd1l3Q2EG98 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
Pkd1l3Q2EG98 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pkd1l3Q2EG98 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Pkd1l3Q2EG98 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pkd1l3Q2EG98 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pkd1l3Q2EG98 Gm27325-201ENSMUST00000175467 74 ntBASIC26.66■■□□□ 1.86
Pkd1l3Q2EG98 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.66■■□□□ 1.86
Pkd1l3Q2EG98 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pkd1l3Q2EG98 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pkd1l3Q2EG98 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.61■■□□□ 1.85
Pkd1l3Q2EG98 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pkd1l3Q2EG98 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pkd1l3Q2EG98 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Pkd1l3Q2EG98 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.44■■□□□ 1.82
Pkd1l3Q2EG98 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.42■■□□□ 1.82
Pkd1l3Q2EG98 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pkd1l3Q2EG98 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.4■■□□□ 1.82
Pkd1l3Q2EG98 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.24■■□□□ 1.79
Pkd1l3Q2EG98 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pkd1l3Q2EG98 Gm25262-201ENSMUST00000174934 133 ntBASIC26.19■■□□□ 1.78
Pkd1l3Q2EG98 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pkd1l3Q2EG98 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pkd1l3Q2EG98 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
Pkd1l3Q2EG98 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Pkd1l3Q2EG98 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.07■■□□□ 1.76
Pkd1l3Q2EG98 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pkd1l3Q2EG98 Rab21-202ENSMUST00000218831 843 ntBASIC26.04■■□□□ 1.76
Pkd1l3Q2EG98 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.03■■□□□ 1.76
Pkd1l3Q2EG98 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Pkd1l3Q2EG98 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Pkd1l3Q2EG98 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Pkd1l3Q2EG98 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pkd1l3Q2EG98 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Pkd1l3Q2EG98 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pkd1l3Q2EG98 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.82■■□□□ 1.72
Pkd1l3Q2EG98 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pkd1l3Q2EG98 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pkd1l3Q2EG98 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.81■■□□□ 1.72
Pkd1l3Q2EG98 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pkd1l3Q2EG98 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pkd1l3Q2EG98 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Pkd1l3Q2EG98 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pkd1l3Q2EG98 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Pkd1l3Q2EG98 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pkd1l3Q2EG98 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pkd1l3Q2EG98 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.69■■□□□ 1.7
Pkd1l3Q2EG98 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.66■■□□□ 1.7
Pkd1l3Q2EG98 Gm26115-201ENSMUST00000175605 87 ntBASIC25.65■■□□□ 1.7
Pkd1l3Q2EG98 Gm8109-201ENSMUST00000194076 746 ntBASIC25.65■■□□□ 1.7
Pkd1l3Q2EG98 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pkd1l3Q2EG98 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pkd1l3Q2EG98 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pkd1l3Q2EG98 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pkd1l3Q2EG98 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.54■■□□□ 1.68
Pkd1l3Q2EG98 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pkd1l3Q2EG98 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pkd1l3Q2EG98 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.51■■□□□ 1.67
Pkd1l3Q2EG98 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.49■■□□□ 1.67
Pkd1l3Q2EG98 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pkd1l3Q2EG98 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pkd1l3Q2EG98 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.41■■□□□ 1.66
Pkd1l3Q2EG98 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms