Protein–RNA interactions for Protein: A0A140T8N3

Igkv13-84, Immunoglobulin kappa chain variable 13-84 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv13-84A0A140T8N3 Gm25239-201ENSMUST00000174915 86 ntBASIC32.24■■■□□ 2.75
Igkv13-84A0A140T8N3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Igkv13-84A0A140T8N3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Igkv13-84A0A140T8N3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Igkv13-84A0A140T8N3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Igkv13-84A0A140T8N3 Gm15042-201ENSMUST00000120212 883 ntBASIC28.51■■■□□ 2.15
Igkv13-84A0A140T8N3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Igkv13-84A0A140T8N3 Gm15045-201ENSMUST00000117359 883 ntBASIC27.95■■■□□ 2.06
Igkv13-84A0A140T8N3 Gm24109-201ENSMUST00000175489 103 ntBASIC27.8■■■□□ 2.04
Igkv13-84A0A140T8N3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Igkv13-84A0A140T8N3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Igkv13-84A0A140T8N3 Psd-208ENSMUST00000224556 2034 ntBASIC27.29■■□□□ 1.96
Igkv13-84A0A140T8N3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Igkv13-84A0A140T8N3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.12■■□□□ 1.93
Igkv13-84A0A140T8N3 Gm23366-201ENSMUST00000175022 89 ntBASIC26.97■■□□□ 1.91
Igkv13-84A0A140T8N3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Igkv13-84A0A140T8N3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Igkv13-84A0A140T8N3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Igkv13-84A0A140T8N3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Igkv13-84A0A140T8N3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Igkv13-84A0A140T8N3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Igkv13-84A0A140T8N3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Igkv13-84A0A140T8N3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Igkv13-84A0A140T8N3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Igkv13-84A0A140T8N3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Igkv13-84A0A140T8N3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.47■■□□□ 1.83
Igkv13-84A0A140T8N3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Igkv13-84A0A140T8N3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Igkv13-84A0A140T8N3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Igkv13-84A0A140T8N3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Igkv13-84A0A140T8N3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Igkv13-84A0A140T8N3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.13■■□□□ 1.77
Igkv13-84A0A140T8N3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.11■■□□□ 1.77
Igkv13-84A0A140T8N3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Igkv13-84A0A140T8N3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Igkv13-84A0A140T8N3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Igkv13-84A0A140T8N3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.69■■□□□ 1.7
Igkv13-84A0A140T8N3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Igkv13-84A0A140T8N3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Igkv13-84A0A140T8N3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.65■■□□□ 1.7
Igkv13-84A0A140T8N3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Igkv13-84A0A140T8N3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Igkv13-84A0A140T8N3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Igkv13-84A0A140T8N3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.42■■□□□ 1.66
Igkv13-84A0A140T8N3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Igkv13-84A0A140T8N3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.39■■□□□ 1.66
Igkv13-84A0A140T8N3 Gm25238-201ENSMUST00000174914 89 ntBASIC25.33■■□□□ 1.65
Igkv13-84A0A140T8N3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Igkv13-84A0A140T8N3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Igkv13-84A0A140T8N3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Igkv13-84A0A140T8N3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.27■■□□□ 1.64
Igkv13-84A0A140T8N3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Igkv13-84A0A140T8N3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Igkv13-84A0A140T8N3 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.23■■□□□ 1.63
Igkv13-84A0A140T8N3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Igkv13-84A0A140T8N3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Igkv13-84A0A140T8N3 Gm27325-201ENSMUST00000175467 74 ntBASIC25.05■■□□□ 1.6
Igkv13-84A0A140T8N3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Igkv13-84A0A140T8N3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Igkv13-84A0A140T8N3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Igkv13-84A0A140T8N3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.96■■□□□ 1.59
Igkv13-84A0A140T8N3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Igkv13-84A0A140T8N3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
Igkv13-84A0A140T8N3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.9■■□□□ 1.58
Igkv13-84A0A140T8N3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
Igkv13-84A0A140T8N3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Igkv13-84A0A140T8N3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Igkv13-84A0A140T8N3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Igkv13-84A0A140T8N3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.8■■□□□ 1.56
Igkv13-84A0A140T8N3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Igkv13-84A0A140T8N3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Igkv13-84A0A140T8N3 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.72■■□□□ 1.55
Igkv13-84A0A140T8N3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Igkv13-84A0A140T8N3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Igkv13-84A0A140T8N3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Igkv13-84A0A140T8N3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Igkv13-84A0A140T8N3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.64■■□□□ 1.54
Igkv13-84A0A140T8N3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.6■■□□□ 1.53
Igkv13-84A0A140T8N3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Igkv13-84A0A140T8N3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.46■■□□□ 1.51
Igkv13-84A0A140T8N3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Igkv13-84A0A140T8N3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Igkv13-84A0A140T8N3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Igkv13-84A0A140T8N3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Igkv13-84A0A140T8N3 Rab21-202ENSMUST00000218831 843 ntBASIC24.38■■□□□ 1.49
Igkv13-84A0A140T8N3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv13-84A0A140T8N3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv13-84A0A140T8N3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Igkv13-84A0A140T8N3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.24■■□□□ 1.47
Igkv13-84A0A140T8N3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Igkv13-84A0A140T8N3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.21■■□□□ 1.47
Igkv13-84A0A140T8N3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.2■■□□□ 1.46
Igkv13-84A0A140T8N3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Igkv13-84A0A140T8N3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Igkv13-84A0A140T8N3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Igkv13-84A0A140T8N3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Igkv13-84A0A140T8N3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Igkv13-84A0A140T8N3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Igkv13-84A0A140T8N3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Igkv13-84A0A140T8N3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms