RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 CPSF4LA6NMK7 179 aaKnown RBP1.81□□□□□ -2.12
HMGB3P15-201ENST00000507326 USP34Q70CQ2 3546 aa1.81□□□□□ -2.12
HMGB3P15-201ENST00000507326 ASXL3Q9C0F0 2248 aa1.81□□□□□ -2.12
HMGB3P15-201ENST00000507326 GVQW2A0A096LPI5 108 aaPredicted RBP1.8□□□□□ -2.12
HMGB3P15-201ENST00000507326 I3L3M4 83 aa1.8□□□□□ -2.12
HMGB3P15-201ENST00000507326 LY6G6CO95867 125 aa1.8□□□□□ -2.12
HMGB3P15-201ENST00000507326 LINC01590Q5TEZ4 76 aa1.8□□□□□ -2.12
HMGB3P15-201ENST00000507326 USMG5Q96IX5 58 aa1.8□□□□□ -2.12
HMGB3P15-201ENST00000507326 CACNA1EQ15878 2313 aa1.8□□□□□ -2.12
HMGB3P15-201ENST00000507326 UNC80Q8N2C7 3258 aa1.8□□□□□ -2.12
HMGB3P15-201ENST00000507326 CADP27708 2225 aa1.79□□□□□ -2.12
HMGB3P15-201ENST00000507326 CRIPTQ9P021 101 aa1.79□□□□□ -2.12
HMGB3P15-201ENST00000507326 REV3LO60673 3130 aa1.78□□□□□ -2.12
HMGB3P15-201ENST00000507326 DEFB131BA0A096LNP1 70 aa1.78□□□□□ -2.12
HMGB3P15-201ENST00000507326 LINC00959A0A1B0GUT2 108 aa1.78□□□□□ -2.12
HMGB3P15-201ENST00000507326 LINC01546A6NGU7 62 aa1.78□□□□□ -2.12
HMGB3P15-201ENST00000507326 IGIPA6NJ69 53 aa1.78□□□□□ -2.12
HMGB3P15-201ENST00000507326 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
HMGB3P15-201ENST00000507326 TMEM167BQ9NRX6 74 aa1.78□□□□□ -2.12
HMGB3P15-201ENST00000507326 TIMM8BQ9Y5J9 83 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P15-201ENST00000507326 CHD9Q3L8U1 2897 aa1.77□□□□□ -2.13
HMGB3P15-201ENST00000507326 TECTAO75443 2155 aa1.77□□□□□ -2.13
HMGB3P15-201ENST00000507326 STATHP02808 62 aa1.77□□□□□ -2.13
HMGB3P15-201ENST00000507326 ANGP03950 147 aaKnown RBP1.77□□□□□ -2.13
HMGB3P15-201ENST00000507326 SZT2Q5T011 3432 aa1.77□□□□□ -2.13
HMGB3P15-201ENST00000507326 CACNA1GO43497 2377 aa1.77□□□□□ -2.13
HMGB3P15-201ENST00000507326 TRIOBPQ9H2D6 2365 aa1.77□□□□□ -2.13
HMGB3P15-201ENST00000507326 TRANK1O15050 2925 aa1.76□□□□□ -2.13
HMGB3P15-201ENST00000507326 G3V318 75 aa1.76□□□□□ -2.13
HMGB3P15-201ENST00000507326 COX6B1P14854 86 aa1.76□□□□□ -2.13
HMGB3P15-201ENST00000507326 RPL37P61927 97 aaKnown RBP1.76□□□□□ -2.13
HMGB3P15-201ENST00000507326 PIGYQ3MUY2 71 aa1.76□□□□□ -2.13
HMGB3P15-201ENST00000507326 C5orf42Q9H799 3197 aa1.76□□□□□ -2.13
HMGB3P15-201ENST00000507326 NAV3Q8IVL0 2385 aa1.76□□□□□ -2.13
HMGB3P15-201ENST00000507326 H0YGG7 62 aa1.75□□□□□ -2.13
HMGB3P15-201ENST00000507326 DEFB119Q8N690 84 aa1.75□□□□□ -2.13
HMGB3P15-201ENST00000507326 TTTY10Q9BZA0 68 aa1.75□□□□□ -2.13
HMGB3P15-201ENST00000507326 KNL1Q8NG31 2342 aa1.75□□□□□ -2.13
HMGB3P15-201ENST00000507326 DEFB110Q30KQ9 67 aa1.74□□□□□ -2.13
HMGB3P15-201ENST00000507326 BRD3OSQ6XYD6 125 aa1.74□□□□□ -2.13
HMGB3P15-201ENST00000507326 COX6B2Q6YFQ2 88 aa1.74□□□□□ -2.13
HMGB3P15-201ENST00000507326 SPINK4O60575 86 aa1.73□□□□□ -2.13
HMGB3P15-201ENST00000507326 NDUFA3O95167 84 aa1.73□□□□□ -2.13
HMGB3P15-201ENST00000507326 RPS27P42677 84 aaKnown RBP1.73□□□□□ -2.13
HMGB3P15-201ENST00000507326 U3KQA8 63 aa1.73□□□□□ -2.13
HMGB3P15-201ENST00000507326 MYO15AQ9UKN7 3530 aa1.73□□□□□ -2.13
HMGB3P15-201ENST00000507326 FLG2Q5D862 2391 aaPredicted RBP1.73□□□□□ -2.13
HMGB3P15-201ENST00000507326 SPENQ96T58 3664 aaKnown RBP1.73□□□□□ -2.13
HMGB3P15-201ENST00000507326 ZFHX3Q15911 3703 aa1.72□□□□□ -2.13
HMGB3P15-201ENST00000507326 USF3Q68DE3 2245 aa1.72□□□□□ -2.13
HMGB3P15-201ENST00000507326 LAMA2P24043 3122 aaKnown RBP1.72□□□□□ -2.13
HMGB3P15-201ENST00000507326 XIRP2A4UGR9 3374 aa1.72□□□□□ -2.13
HMGB3P15-201ENST00000507326 DOPEY2Q9Y3R5 2298 aa1.71□□□□□ -2.13
HMGB3P15-201ENST00000507326 KRTAP10-10P60014 251 aa1.71□□□□□ -2.14
HMGB3P15-201ENST00000507326 PRO3102Q9H379 93 aa1.71□□□□□ -2.14
HMGB3P15-201ENST00000507326 SPEGQ15772 3267 aa1.71□□□□□ -2.14
HMGB3P15-201ENST00000507326 BSNQ9UPA5 3926 aa1.71□□□□□ -2.14
HMGB3P15-201ENST00000507326 RANBP2P49792 3224 aaKnown RBP1.71□□□□□ -2.14
HMGB3P15-201ENST00000507326 WDFY3Q8IZQ1 3526 aa1.7□□□□□ -2.14
HMGB3P15-201ENST00000507326 CNOT1A5YKK6 2376 aaKnown RBP1.7□□□□□ -2.14
HMGB3P15-201ENST00000507326 CEP290O15078 2479 aa1.7□□□□□ -2.14
HMGB3P15-201ENST00000507326 EYSQ5T1H1 3165 aa1.7□□□□□ -2.14
HMGB3P15-201ENST00000507326 VCANP13611 3396 aa1.7□□□□□ -2.14
HMGB3P15-201ENST00000507326 ZDBF2Q9HCK1 2354 aa1.69□□□□□ -2.14
HMGB3P15-201ENST00000507326 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
HMGB3P15-201ENST00000507326 TP53AIP1Q9HCN2 124 aa1.69□□□□□ -2.14
HMGB3P15-201ENST00000507326 CNTRLQ7Z7A1 2325 aa1.68□□□□□ -2.14
HMGB3P15-201ENST00000507326 A0A0C4DFX4 3053 aa1.68□□□□□ -2.14
HMGB3P15-201ENST00000507326 H3BSH0 61 aa1.68□□□□□ -2.14
HMGB3P15-201ENST00000507326 K7EQZ3 153 aa1.68□□□□□ -2.14
HMGB3P15-201ENST00000507326 LINC00158P58513 81 aa1.68□□□□□ -2.14
HMGB3P15-201ENST00000507326 Q8IZM0 81 aa1.68□□□□□ -2.14
HMGB3P15-201ENST00000507326 ARHGAP5-AS1Q96IT6 56 aa1.68□□□□□ -2.14
HMGB3P15-201ENST00000507326 ANKRD17O75179 2603 aaKnown RBP1.67□□□□□ -2.14
HMGB3P15-201ENST00000507326 DEFB133Q30KQ1 61 aa1.67□□□□□ -2.14
HMGB3P15-201ENST00000507326 SMIM2Q9BVW6 85 aa1.67□□□□□ -2.14
HMGB3P15-201ENST00000507326 CNFNQ9BYD5 112 aa1.67□□□□□ -2.14
HMGB3P15-201ENST00000507326 DMDP11532 3685 aa1.67□□□□□ -2.14
HMGB3P15-201ENST00000507326 BAHCC1Q9P281 2608 aa1.67□□□□□ -2.14
HMGB3P15-201ENST00000507326 CACNA1BQ00975 2339 aa1.66□□□□□ -2.14
HMGB3P15-201ENST00000507326 CDKN2A-AS1Q9UH64 79 aa1.66□□□□□ -2.14
HMGB3P15-201ENST00000507326 PRUNE2Q8WUY3 3088 aa1.66□□□□□ -2.14
HMGB3P15-201ENST00000507326 LYNX1G3V0Z9 82 aa1.65□□□□□ -2.15
HMGB3P15-201ENST00000507326 MRPL34Q9BQ48 92 aaKnown RBP1.65□□□□□ -2.15
HMGB3P15-201ENST00000507326 PLCE1Q9P212 2302 aa1.65□□□□□ -2.15
HMGB3P15-201ENST00000507326 SORL1Q92673 2214 aa1.64□□□□□ -2.15
HMGB3P15-201ENST00000507326 SPRR5A0A1B0GTR4 108 aa1.64□□□□□ -2.15
HMGB3P15-201ENST00000507326 CRIP1P50238 77 aa1.64□□□□□ -2.15
HMGB3P15-201ENST00000507326 LINC00308Q8TCZ7 52 aa1.64□□□□□ -2.15
HMGB3P15-201ENST00000507326 TNRC18O15417 2968 aaPredicted RBP1.64□□□□□ -2.15
HMGB3P15-201ENST00000507326 FAM208BQ5VWN6 2430 aa1.64□□□□□ -2.15
HMGB3P15-201ENST00000507326 MINOS1Q5TGZ0 78 aa1.63□□□□□ -2.15
HMGB3P15-201ENST00000507326 DEFB123Q8N688 67 aa1.63□□□□□ -2.15
HMGB3P15-201ENST00000507326 MUC3AQ02505 3323 aa1.63□□□□□ -2.15
HMGB3P15-201ENST00000507326 LAMA1P25391 3075 aa1.63□□□□□ -2.15
HMGB3P15-201ENST00000507326 OTOGLQ3ZCN5 2332 aa1.63□□□□□ -2.15
HMGB3P15-201ENST00000507326 TRIOO75962 3097 aa1.62□□□□□ -2.15
HMGB3P15-201ENST00000507326 COL6A6A6NMZ7 2263 aa1.62□□□□□ -2.15
HMGB3P15-201ENST00000507326 ZFHX4Q86UP3 3567 aa1.62□□□□□ -2.15
HMGB3P15-201ENST00000507326 FAM186AA6NE01 2351 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms