RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
HMGB3P15-201ENST00000507326 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
HMGB3P15-201ENST00000507326 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
HMGB3P15-201ENST00000507326 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
HMGB3P15-201ENST00000507326 FOXD1Q16676 465 aa16.28■□□□□ 0.2
HMGB3P15-201ENST00000507326 PLPPR3Q6T4P5 718 aa15.61■□□□□ 0.09
HMGB3P15-201ENST00000507326 PPP6R1Q9UPN7 881 aa15.27■□□□□ 0.04
HMGB3P15-201ENST00000507326 ADRA2BP18089 450 aa15.25■□□□□ 0.03
HMGB3P15-201ENST00000507326 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
HMGB3P15-201ENST00000507326 MSH5O43196 834 aa15.19■□□□□ 0.02
HMGB3P15-201ENST00000507326 POTEDQ86YR6 584 aa14.76□□□□□ -0.05
HMGB3P15-201ENST00000507326 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
HMGB3P15-201ENST00000507326 SCAF1Q9H7N4 1312 aaKnown RBP13.9□□□□□ -0.18
HMGB3P15-201ENST00000507326 DMRT2Q9Y5R5 561 aa13.86□□□□□ -0.19
HMGB3P15-201ENST00000507326 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
HMGB3P15-201ENST00000507326 CNKSR2Q8WXI2 1034 aa13.42□□□□□ -0.26
HMGB3P15-201ENST00000507326 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
HMGB3P15-201ENST00000507326 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
HMGB3P15-201ENST00000507326 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.29
HMGB3P15-201ENST00000507326 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
HMGB3P15-201ENST00000507326 CACNB1Q02641 598 aaPredicted RBP13.04□□□□□ -0.32
HMGB3P15-201ENST00000507326 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
HMGB3P15-201ENST00000507326 RNF39Q9H2S5 420 aa12.97□□□□□ -0.33
HMGB3P15-201ENST00000507326 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
HMGB3P15-201ENST00000507326 KCNA4P22459 653 aa12.82□□□□□ -0.36
HMGB3P15-201ENST00000507326 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
HMGB3P15-201ENST00000507326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
HMGB3P15-201ENST00000507326 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
HMGB3P15-201ENST00000507326 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
HMGB3P15-201ENST00000507326 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
HMGB3P15-201ENST00000507326 CAPN15O75808 1086 aa12.29□□□□□ -0.44
HMGB3P15-201ENST00000507326 DSG3P32926 999 aa12.18□□□□□ -0.46
HMGB3P15-201ENST00000507326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
HMGB3P15-201ENST00000507326 APLP2Q06481 763 aa12.13□□□□□ -0.47
HMGB3P15-201ENST00000507326 HNRNPUL2Q1KMD3 747 aaKnown RBP12.13□□□□□ -0.47
HMGB3P15-201ENST00000507326 TRHP20396 242 aaPredicted RBP12.12□□□□□ -0.47
HMGB3P15-201ENST00000507326 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
HMGB3P15-201ENST00000507326 SAMD1Q6SPF0 538 aaPredicted RBP12.07□□□□□ -0.48
HMGB3P15-201ENST00000507326 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
HMGB3P15-201ENST00000507326 ABCB7O75027 752 aa12.03□□□□□ -0.48
HMGB3P15-201ENST00000507326 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
HMGB3P15-201ENST00000507326 FOXD4L1Q9NU39 408 aa11.93□□□□□ -0.5
HMGB3P15-201ENST00000507326 ZBTB22O15209 634 aa11.78□□□□□ -0.52
HMGB3P15-201ENST00000507326 POLA2Q14181 598 aa11.78□□□□□ -0.52
HMGB3P15-201ENST00000507326 ATF5Q9Y2D1 282 aaPredicted RBP11.76□□□□□ -0.53
HMGB3P15-201ENST00000507326 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
HMGB3P15-201ENST00000507326 POTEHQ6S545 545 aa11.58□□□□□ -0.56
HMGB3P15-201ENST00000507326 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
HMGB3P15-201ENST00000507326 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
HMGB3P15-201ENST00000507326 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
HMGB3P15-201ENST00000507326 AKT1S1Q96B36 256 aa11.36□□□□□ -0.59
HMGB3P15-201ENST00000507326 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
HMGB3P15-201ENST00000507326 FBLN2P98095 1184 aa11.29□□□□□ -0.6
HMGB3P15-201ENST00000507326 CSRNP3Q8WYN3 585 aa11.29□□□□□ -0.6
HMGB3P15-201ENST00000507326 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
HMGB3P15-201ENST00000507326 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
HMGB3P15-201ENST00000507326 EHMT2Q96KQ7 1210 aa11.21□□□□□ -0.61
HMGB3P15-201ENST00000507326 SPDYE2BA6NHP3 402 aa11.18□□□□□ -0.62
HMGB3P15-201ENST00000507326 SPDYE6P0CI01 402 aa11.18□□□□□ -0.62
HMGB3P15-201ENST00000507326 SPDYE2Q495Y8 402 aa11.18□□□□□ -0.62
HMGB3P15-201ENST00000507326 PITPNM1O00562 1244 aa11.15□□□□□ -0.62
HMGB3P15-201ENST00000507326 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
HMGB3P15-201ENST00000507326 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
HMGB3P15-201ENST00000507326 SSUH2Q9Y2M2 353 aa11.03□□□□□ -0.64
HMGB3P15-201ENST00000507326 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
HMGB3P15-201ENST00000507326 CLEC11AQ9Y240 323 aa10.99□□□□□ -0.65
HMGB3P15-201ENST00000507326 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
HMGB3P15-201ENST00000507326 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
HMGB3P15-201ENST00000507326 HAX1O00165 279 aa10.9□□□□□ -0.66
HMGB3P15-201ENST00000507326 PRKAR2AP13861 404 aaKnown RBP10.87□□□□□ -0.67
HMGB3P15-201ENST00000507326 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
HMGB3P15-201ENST00000507326 PRR29P0C7W0 189 aa10.8□□□□□ -0.68
HMGB3P15-201ENST00000507326 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
HMGB3P15-201ENST00000507326 EVX2Q03828 476 aa10.76□□□□□ -0.69
HMGB3P15-201ENST00000507326 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
HMGB3P15-201ENST00000507326 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
HMGB3P15-201ENST00000507326 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
HMGB3P15-201ENST00000507326 FARP1Q9Y4F1 1045 aaPredicted RBP10.6□□□□□ -0.71
HMGB3P15-201ENST00000507326 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
HMGB3P15-201ENST00000507326 CD44P16070 742 aaKnown RBP10.53□□□□□ -0.72
HMGB3P15-201ENST00000507326 GABBR2O75899 941 aa10.51□□□□□ -0.73
HMGB3P15-201ENST00000507326 PROM2Q8N271 834 aa10.42□□□□□ -0.74
HMGB3P15-201ENST00000507326 ZRANB1Q9UGI0 708 aa10.4□□□□□ -0.74
HMGB3P15-201ENST00000507326 ZNF579Q8NAF0 562 aaKnown RBP10.35□□□□□ -0.75
HMGB3P15-201ENST00000507326 NPM1P06748 294 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMGB3P15-201ENST00000507326 MNX1P50219 401 aaPredicted RBP10.34□□□□□ -0.75
HMGB3P15-201ENST00000507326 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
HMGB3P15-201ENST00000507326 CLCN6P51797 869 aa10.31□□□□□ -0.76
HMGB3P15-201ENST00000507326 POTEIP0CG38 1075 aa10.3□□□□□ -0.76
HMGB3P15-201ENST00000507326 PHF12Q96QT6 1004 aa10.27□□□□□ -0.77
HMGB3P15-201ENST00000507326 FKBP8Q14318 412 aa10.26□□□□□ -0.77
HMGB3P15-201ENST00000507326 GALR2O43603 387 aaPredicted RBP10.25□□□□□ -0.77
HMGB3P15-201ENST00000507326 DCBLD2Q96PD2 775 aa10.25□□□□□ -0.77
HMGB3P15-201ENST00000507326 MIER1Q8N108 512 aa10.23□□□□□ -0.77
HMGB3P15-201ENST00000507326 LHX8Q68G74 356 aa10.21□□□□□ -0.77
HMGB3P15-201ENST00000507326 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
HMGB3P15-201ENST00000507326 TSPYL2Q9H2G4 693 aaPredicted RBP10.19□□□□□ -0.78
HMGB3P15-201ENST00000507326 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
HMGB3P15-201ENST00000507326 MS4A3Q96HJ5 214 aa10.12□□□□□ -0.79
HMGB3P15-201ENST00000507326 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms