RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 BCORQ6W2J9 1755 aa0.32□□□□□ -2.36
RFXAP-202ENST00000472888 RGPD5Q99666 1765 aa0.32□□□□□ -2.36
RFXAP-202ENST00000472888 DMBT1Q9UGM3 2413 aaPredicted RBP0.31□□□□□ -2.36
RFXAP-202ENST00000472888 SMIM13P0DJ93 91 aa0.31□□□□□ -2.36
RFXAP-202ENST00000472888 MAGI3Q5TCQ9 1506 aa0.31□□□□□ -2.36
RFXAP-202ENST00000472888 CFAP74Q9C0B2 1584 aa0.31□□□□□ -2.36
RFXAP-202ENST00000472888 CEP170BQ9Y4F5 1589 aaPredicted RBP0.31□□□□□ -2.36
RFXAP-202ENST00000472888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.31□□□□□ -2.36
RFXAP-202ENST00000472888 CACNA1AO00555 2505 aa0.3□□□□□ -2.36
RFXAP-202ENST00000472888 CCDC88BA6NC98 1476 aa0.3□□□□□ -2.36
RFXAP-202ENST00000472888 CSPG4Q6UVK1 2322 aa0.29□□□□□ -2.36
RFXAP-202ENST00000472888 PIK3C2BO00750 1634 aa0.29□□□□□ -2.36
RFXAP-202ENST00000472888 PREX1Q8TCU6 1659 aa0.29□□□□□ -2.36
RFXAP-202ENST00000472888 KMT2AQ03164 3969 aa0.29□□□□□ -2.36
RFXAP-202ENST00000472888 FSIP2Q5CZC0 6907 aa0.29□□□□□ -2.36
RFXAP-202ENST00000472888 FAT2Q9NYQ8 4349 aa0.28□□□□□ -2.36
RFXAP-202ENST00000472888 LTN1O94822 1766 aa0.28□□□□□ -2.36
RFXAP-202ENST00000472888 LCE6AA0A183 80 aa0.28□□□□□ -2.36
RFXAP-202ENST00000472888 PRM1P04553 51 aa0.28□□□□□ -2.36
RFXAP-202ENST00000472888 WFDC13Q8IUB5 93 aa0.28□□□□□ -2.36
RFXAP-202ENST00000472888 CHD8Q9HCK8 2581 aa0.28□□□□□ -2.37
RFXAP-202ENST00000472888 PTPN23Q9H3S7 1636 aa0.27□□□□□ -2.37
RFXAP-202ENST00000472888 PRKDCP78527 4128 aaKnown RBP0.27□□□□□ -2.37
RFXAP-202ENST00000472888 NREPQ16612 68 aa0.27□□□□□ -2.37
RFXAP-202ENST00000472888 LELP1Q5T871 98 aa0.27□□□□□ -2.37
RFXAP-202ENST00000472888 MAP3K1Q13233 1512 aa0.27□□□□□ -2.37
RFXAP-202ENST00000472888 POLR1AO95602 1720 aaPredicted RBP0.27□□□□□ -2.37
RFXAP-202ENST00000472888 TNXBP22105 4242 aa0.26□□□□□ -2.37
RFXAP-202ENST00000472888 M0R2T5 61 aa0.26□□□□□ -2.37
RFXAP-202ENST00000472888 NDUFA3O95167 84 aa0.26□□□□□ -2.37
RFXAP-202ENST00000472888 LPAP08519 4548 aa0.26□□□□□ -2.37
RFXAP-202ENST00000472888 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
RFXAP-202ENST00000472888 SPRR2DP22532 72 aa0.25□□□□□ -2.37
RFXAP-202ENST00000472888 TIAM2Q8IVF5 1701 aa0.24□□□□□ -2.37
RFXAP-202ENST00000472888 NWD1Q149M9 1564 aa0.24□□□□□ -2.37
RFXAP-202ENST00000472888 ANKRD50Q9ULJ7 1429 aa0.24□□□□□ -2.37
RFXAP-202ENST00000472888 C3orf79P0CE67 100 aa0.24□□□□□ -2.37
RFXAP-202ENST00000472888 EP300Q09472 2414 aaPredicted RBP0.23□□□□□ -2.37
RFXAP-202ENST00000472888 CNOT1A5YKK6 2376 aaKnown RBP0.23□□□□□ -2.37
RFXAP-202ENST00000472888 NDUFA4O00483 81 aa0.23□□□□□ -2.37
RFXAP-202ENST00000472888 SETXQ7Z333 2677 aaKnown RBP0.23□□□□□ -2.37
RFXAP-202ENST00000472888 ZNF831Q5JPB2 1677 aa0.23□□□□□ -2.37
RFXAP-202ENST00000472888 FLNCQ14315 2725 aa0.22□□□□□ -2.37
RFXAP-202ENST00000472888 ARFGEF2Q9Y6D5 1785 aa0.22□□□□□ -2.37
RFXAP-202ENST00000472888 PRO3102Q9H379 93 aa0.22□□□□□ -2.37
RFXAP-202ENST00000472888 DOT1LQ8TEK3 1739 aa0.21□□□□□ -2.38
RFXAP-202ENST00000472888 SMCO4Q9NRQ5 59 aa0.21□□□□□ -2.38
RFXAP-202ENST00000472888 ABCA8O94911 1581 aa0.2□□□□□ -2.38
RFXAP-202ENST00000472888 ALMS1Q8TCU4 4167 aa0.2□□□□□ -2.38
RFXAP-202ENST00000472888 BSNQ9UPA5 3926 aa0.2□□□□□ -2.38
RFXAP-202ENST00000472888 TNRC6CQ9HCJ0 1690 aaKnown RBP0.2□□□□□ -2.38
RFXAP-202ENST00000472888 REV3LO60673 3130 aa0.2□□□□□ -2.38
RFXAP-202ENST00000472888 NSD1Q96L73 2696 aaPredicted RBP0.19□□□□□ -2.38
RFXAP-202ENST00000472888 CD163L1Q9NR16 1453 aa0.19□□□□□ -2.38
RFXAP-202ENST00000472888 PDCD5O14737 125 aa0.19□□□□□ -2.38
RFXAP-202ENST00000472888 DEFB135Q30KP9 77 aa0.19□□□□□ -2.38
RFXAP-202ENST00000472888 MAP1BP46821 2468 aaKnown RBP0.18□□□□□ -2.38
RFXAP-202ENST00000472888 FLNAP21333 2647 aaKnown RBP0.17□□□□□ -2.38
RFXAP-202ENST00000472888 MACF1Q9UPN3 7388 aaKnown RBP0.17□□□□□ -2.38
RFXAP-202ENST00000472888 TRANK1O15050 2925 aa0.17□□□□□ -2.38
RFXAP-202ENST00000472888 NESP48681 1621 aa0.17□□□□□ -2.38
RFXAP-202ENST00000472888 LINC00158P58513 81 aa0.17□□□□□ -2.38
RFXAP-202ENST00000472888 DCHS2Q6V1P9 2916 aa0.17□□□□□ -2.38
RFXAP-202ENST00000472888 HMCN2Q8NDA2 5059 aa0.16□□□□□ -2.38
RFXAP-202ENST00000472888 H3BVH4 76 aa0.16□□□□□ -2.38
RFXAP-202ENST00000472888 MRPL33O75394 65 aaKnown RBP0.16□□□□□ -2.38
RFXAP-202ENST00000472888 WNK1Q9H4A3 2382 aa0.16□□□□□ -2.38
RFXAP-202ENST00000472888 SCN11AQ9UI33 1791 aa0.15□□□□□ -2.39
RFXAP-202ENST00000472888 CFAP43Q8NDM7 1665 aa0.14□□□□□ -2.39
RFXAP-202ENST00000472888 CICQ96RK0 1608 aaPredicted RBP0.14□□□□□ -2.39
RFXAP-202ENST00000472888 DEFB131BA0A096LNP1 70 aa0.14□□□□□ -2.39
RFXAP-202ENST00000472888 SPRR2BP35325 72 aa0.14□□□□□ -2.39
RFXAP-202ENST00000472888 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
RFXAP-202ENST00000472888 RALGAPBQ86X10 1494 aa0.14□□□□□ -2.39
RFXAP-202ENST00000472888 HSPG2P98160 4391 aa0.13□□□□□ -2.39
RFXAP-202ENST00000472888 DEFA5Q01523 94 aa0.13□□□□□ -2.39
RFXAP-202ENST00000472888 APC2O95996 2303 aa0.13□□□□□ -2.39
RFXAP-202ENST00000472888 KNL1Q8NG31 2342 aa0.13□□□□□ -2.39
RFXAP-202ENST00000472888 DUOX2Q9NRD8 1548 aa0.13□□□□□ -2.39
RFXAP-202ENST00000472888 UBL5Q9BZL1 73 aa0.12□□□□□ -2.39
RFXAP-202ENST00000472888 UGGT2Q9NYU1 1516 aa0.12□□□□□ -2.39
RFXAP-202ENST00000472888 HFM1A2PYH4 1435 aa0.12□□□□□ -2.39
RFXAP-202ENST00000472888 WIZO95785 1651 aa0.11□□□□□ -2.39
RFXAP-202ENST00000472888 C4AP0C0L4 1744 aa0.11□□□□□ -2.39
RFXAP-202ENST00000472888 C4BP0C0L5 1744 aa0.11□□□□□ -2.39
RFXAP-202ENST00000472888 H0YGG7 62 aa0.11□□□□□ -2.39
RFXAP-202ENST00000472888 KCNQ1DNQ9H478 68 aa0.11□□□□□ -2.39
RFXAP-202ENST00000472888 LMTK2Q8IWU2 1503 aa0.11□□□□□ -2.39
RFXAP-202ENST00000472888 FLNBO75369 2602 aaKnown RBP0.1□□□□□ -2.39
RFXAP-202ENST00000472888 ATXN8Q156A1 80 aa0.1□□□□□ -2.39
RFXAP-202ENST00000472888 DEPDC5O75140 1603 aa0.09□□□□□ -2.39
RFXAP-202ENST00000472888 PLCH1Q4KWH8 1693 aa0.09□□□□□ -2.39
RFXAP-202ENST00000472888 AKAP13Q12802 2813 aa0.09□□□□□ -2.39
RFXAP-202ENST00000472888 LYNX1G3V0Z9 82 aa0.09□□□□□ -2.4
RFXAP-202ENST00000472888 ENHOQ6UWT2 76 aa0.09□□□□□ -2.4
RFXAP-202ENST00000472888 PLXNC1O60486 1568 aa0.09□□□□□ -2.4
RFXAP-202ENST00000472888 RICTORQ6R327 1708 aa0.08□□□□□ -2.4
RFXAP-202ENST00000472888 H0YAA0 97 aa0.08□□□□□ -2.4
RFXAP-202ENST00000472888 EIF2AK4Q9P2K8 1649 aaKnown RBP0.08□□□□□ -2.4
RFXAP-202ENST00000472888 PDE4DIPQ5VU43 2346 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms