RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 AEBP2Q6ZN18 517 aaPredicted RBP33.24■■■□□ 2.91
RFXAP-202ENST00000472888 CHIC1Q5VXU3 224 aa31.16■■■□□ 2.58
RFXAP-202ENST00000472888 SENP3Q9H4L4 574 aaPredicted RBP28.25■■■□□ 2.11
RFXAP-202ENST00000472888 PHF23Q9BUL5 403 aaPredicted RBP27.88■■■□□ 2.05
RFXAP-202ENST00000472888 FOXD1Q16676 465 aa26.46■■□□□ 1.83
RFXAP-202ENST00000472888 POTEDQ86YR6 584 aa24.83■■□□□ 1.57
RFXAP-202ENST00000472888 MSH5O43196 834 aa24.77■■□□□ 1.56
RFXAP-202ENST00000472888 PLPPR3Q6T4P5 718 aa24.67■■□□□ 1.54
RFXAP-202ENST00000472888 PIAS4Q8N2W9 510 aaPredicted RBP24.56■■□□□ 1.52
RFXAP-202ENST00000472888 PPP6R1Q9UPN7 881 aa24.54■■□□□ 1.52
RFXAP-202ENST00000472888 ADRA2BP18089 450 aa24.38■■□□□ 1.49
RFXAP-202ENST00000472888 MAPK8IP2Q13387 824 aaPredicted RBP22.52■■□□□ 1.2
RFXAP-202ENST00000472888 DMRT2Q9Y5R5 561 aa22.4■■□□□ 1.18
RFXAP-202ENST00000472888 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
RFXAP-202ENST00000472888 PPP4R3CPQ6ZMV5 832 aa21.62■■□□□ 1.05
RFXAP-202ENST00000472888 HOXD11P31277 338 aaPredicted RBP21.47■■□□□ 1.03
RFXAP-202ENST00000472888 CACNB1Q02641 598 aaPredicted RBP21.44■■□□□ 1.02
RFXAP-202ENST00000472888 DCAF8L1A6NGE4 600 aa21.37■■□□□ 1.01
RFXAP-202ENST00000472888 CNKSR2Q8WXI2 1034 aa21.26■□□□□ 0.99
RFXAP-202ENST00000472888 RNF39Q9H2S5 420 aa21.19■□□□□ 0.98
RFXAP-202ENST00000472888 RNF216Q9NWF9 866 aaPredicted RBP21.17■□□□□ 0.98
RFXAP-202ENST00000472888 C1QBPQ07021 282 aaKnown RBP20.79■□□□□ 0.92
RFXAP-202ENST00000472888 DNAJC5BQ9UF47 199 aa20.76■□□□□ 0.91
RFXAP-202ENST00000472888 NCBP3Q53F19 620 aaKnown RBP20.58■□□□□ 0.89
RFXAP-202ENST00000472888 NPM3O75607 178 aaKnown RBP20.43■□□□□ 0.86
RFXAP-202ENST00000472888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.85
RFXAP-202ENST00000472888 U3KPZ7 1027 aaPredicted RBP20■□□□□ 0.79
RFXAP-202ENST00000472888 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
RFXAP-202ENST00000472888 KCNA4P22459 653 aa19.76■□□□□ 0.75
RFXAP-202ENST00000472888 DSG3P32926 999 aa19.73■□□□□ 0.75
RFXAP-202ENST00000472888 CAPN15O75808 1086 aa19.67■□□□□ 0.74
RFXAP-202ENST00000472888 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
RFXAP-202ENST00000472888 POTEHQ6S545 545 aa19.35■□□□□ 0.69
RFXAP-202ENST00000472888 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
RFXAP-202ENST00000472888 ABCB7O75027 752 aa19.25■□□□□ 0.67
RFXAP-202ENST00000472888 ZNF219Q9P2Y4 722 aaPredicted RBP19.23■□□□□ 0.67
RFXAP-202ENST00000472888 APLP2Q06481 763 aa19.19■□□□□ 0.66
RFXAP-202ENST00000472888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
RFXAP-202ENST00000472888 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
RFXAP-202ENST00000472888 SAMD1Q6SPF0 538 aaPredicted RBP19.07■□□□□ 0.64
RFXAP-202ENST00000472888 MYCNP04198 464 aaPredicted RBP18.83■□□□□ 0.6
RFXAP-202ENST00000472888 POLA2Q14181 598 aa18.73■□□□□ 0.59
RFXAP-202ENST00000472888 RBM42Q9BTD8 480 aaKnown RBP18.71■□□□□ 0.59
RFXAP-202ENST00000472888 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
RFXAP-202ENST00000472888 ATF5Q9Y2D1 282 aaPredicted RBP18.55■□□□□ 0.56
RFXAP-202ENST00000472888 CHRDL2Q6WN34 429 aa18.51■□□□□ 0.55
RFXAP-202ENST00000472888 FOXD4L1Q9NU39 408 aa18.48■□□□□ 0.55
RFXAP-202ENST00000472888 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
RFXAP-202ENST00000472888 ZBTB22O15209 634 aa18.24■□□□□ 0.51
RFXAP-202ENST00000472888 ZBTB12Q9Y330 459 aaPredicted RBP18.24■□□□□ 0.51
RFXAP-202ENST00000472888 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
RFXAP-202ENST00000472888 REM2Q8IYK8 340 aaPredicted RBP18.14■□□□□ 0.49
RFXAP-202ENST00000472888 PIP4P2Q8N4L2 257 aa18.04■□□□□ 0.48
RFXAP-202ENST00000472888 SP7Q8TDD2 431 aaPredicted RBP17.99■□□□□ 0.47
RFXAP-202ENST00000472888 PITPNM1O00562 1244 aa17.97■□□□□ 0.47
RFXAP-202ENST00000472888 ATXN8OSP0DMR3 200 aa17.92■□□□□ 0.46
RFXAP-202ENST00000472888 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
RFXAP-202ENST00000472888 FXR2P51116 673 aaKnown RBP eCLIP17.88■□□□□ 0.45
RFXAP-202ENST00000472888 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
RFXAP-202ENST00000472888 SPDYE2BA6NHP3 402 aa17.71■□□□□ 0.43
RFXAP-202ENST00000472888 HAX1O00165 279 aa17.71■□□□□ 0.43
RFXAP-202ENST00000472888 SPDYE6P0CI01 402 aa17.71■□□□□ 0.43
RFXAP-202ENST00000472888 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
RFXAP-202ENST00000472888 MKRN4PQ13434 485 aaPredicted RBP17.68■□□□□ 0.42
RFXAP-202ENST00000472888 FBLN2P98095 1184 aa17.65■□□□□ 0.42
RFXAP-202ENST00000472888 EVX2Q03828 476 aa17.63■□□□□ 0.41
RFXAP-202ENST00000472888 SSUH2Q9Y2M2 353 aa17.52■□□□□ 0.4
RFXAP-202ENST00000472888 PRKAR2AP13861 404 aaKnown RBP17.45■□□□□ 0.38
RFXAP-202ENST00000472888 SPDYE1Q8NFV5 336 aaPredicted RBP17.45■□□□□ 0.38
RFXAP-202ENST00000472888 CLEC11AQ9Y240 323 aa17.43■□□□□ 0.38
RFXAP-202ENST00000472888 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
RFXAP-202ENST00000472888 C19orf67A6NJJ6 358 aa17.32■□□□□ 0.36
RFXAP-202ENST00000472888 CHADLQ6NUI6 762 aa17.22■□□□□ 0.35
RFXAP-202ENST00000472888 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
RFXAP-202ENST00000472888 GABBR2O75899 941 aa17.12■□□□□ 0.33
RFXAP-202ENST00000472888 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
RFXAP-202ENST00000472888 FARP1Q9Y4F1 1045 aaPredicted RBP16.91■□□□□ 0.3
RFXAP-202ENST00000472888 CD44P16070 742 aaKnown RBP16.87■□□□□ 0.29
RFXAP-202ENST00000472888 POTEIP0CG38 1075 aa16.85■□□□□ 0.29
RFXAP-202ENST00000472888 LHX8Q68G74 356 aa16.84■□□□□ 0.29
RFXAP-202ENST00000472888 CREBZFQ9NS37 354 aa16.71■□□□□ 0.27
RFXAP-202ENST00000472888 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
RFXAP-202ENST00000472888 CLCN6P51797 869 aa16.63■□□□□ 0.25
RFXAP-202ENST00000472888 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
RFXAP-202ENST00000472888 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
RFXAP-202ENST00000472888 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
RFXAP-202ENST00000472888 DCBLD2Q96PD2 775 aa16.49■□□□□ 0.23
RFXAP-202ENST00000472888 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
RFXAP-202ENST00000472888 MNX1P50219 401 aaPredicted RBP16.43■□□□□ 0.22
RFXAP-202ENST00000472888 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
RFXAP-202ENST00000472888 POTEB2H3BUK9 544 aa16.29■□□□□ 0.2
RFXAP-202ENST00000472888 PAK3O75914 559 aaPredicted RBP16.26■□□□□ 0.19
RFXAP-202ENST00000472888 OTUD5Q96G74 571 aa16.25■□□□□ 0.19
RFXAP-202ENST00000472888 NPM1P06748 294 aaKnown RBP eCLIP16.24■□□□□ 0.19
RFXAP-202ENST00000472888 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
RFXAP-202ENST00000472888 PROM2Q8N271 834 aa16.23■□□□□ 0.19
RFXAP-202ENST00000472888 MS4A3Q96HJ5 214 aa16.15■□□□□ 0.18
RFXAP-202ENST00000472888 FKBP8Q14318 412 aa16.1■□□□□ 0.17
RFXAP-202ENST00000472888 ASTLQ6HA08 431 aaPredicted RBP16.1■□□□□ 0.17
RFXAP-202ENST00000472888 ATMINO43313 823 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms