RNA–Protein interactions for RNA: ENSMUST00000176893.7

Bdnf-211, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,707 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-211ENSMUST00000176893 P03985 172 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ear1P97426 155 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gm10735Q3US96 136 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Defb28Q3V2L0 89 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 H2al1aQ5M8Q2 105 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 A730015C16RikQ8C992 119 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Q8VCE4 163 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 MavsQ8VCF0 503 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Sdf2Q9DCT5 211 aa6.32□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ighv16-1A0A0A6YW39 117 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ighv9-1A0A0B4J1P3 117 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gm39566A0A1B0GT45 1251 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gm20918J3QN17 227 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Amy2P00688 508 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Myod1P10085 318 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Cxcl10P17515 98 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Bsph1Q3UW26 133 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Oosp2Q4FZG8 168 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Fam19a1Q7TPG8 133 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Olfr1256Q8VGP1 306 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gpa33Q9JKA5 319 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Try5Q9QUK9 246 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Try4Q9R0T7 246 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Brca2P97929 3329 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav6-6A0A075B603 114 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav7-4A0A075B6C1 113 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ighv1-61P01749 117 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 A230072I06RikQ3UUJ8 172 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav7d-4Q5R1H9 113 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Vmn1r195Q5SVD6 316 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Taf15Q8BQ46 557 aaKnown RBP6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Nup35Q8R4R6 325 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Notch2O35516 2470 aa6.31□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Mef2bO55087 349 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Bri3P28662 125 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Defb22Q8BVC1 179 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Rhbdd2Q8VEK2 361 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ssbp3Q9D032 388 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Pygo1Q9D0P5 417 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ascl3Q9JJR7 174 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Col4a2P08122 1707 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Igkv12-38A0A0G2JEI7 115 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ighv8-9A0A0G2JET1 119 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ighv1-78A0A0G2JGN3 117 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ighv1-77A0A0G2JGS9 117 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gm45521A0A1B0GRK0 198 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ifitm7G3X9Z2 141 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Esp3J3QN49 87 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 ApcsP12246 224 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 SlpiP97430 131 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gpr84Q8CIM5 396 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Srsf9Q9D0B0 222 aaKnown RBP6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Mrps11Q9DCA2 191 aaKnown RBP6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Tmprss5Q9ER04 455 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Cfap54Q8C6S9 3106 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav12n-2A0A075B626 113 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav6n-7A0A075B6A6 116 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav6d-7A0A075B6B0 112 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Igkv5-39A0A0G2JDV4 115 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 P01723 117 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Cks2P56390 79 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 CtseP70269 397 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gm904Q3V2L5 102 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Cfhr1Q61406 343 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Dlx1Q64317 255 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Olfr1382Q7TQT3 311 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Agfg2Q80WC7 479 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Olfr982Q8VGB3 321 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Defb8Q91V82 60 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Higd1bQ99JY6 98 aa6.3□□□□□ -1.4
Bdnf-211ENSMUST00000176893 H2al1bA0A087WP11 105 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 H2al1kJ3QP08 105 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Lyz2P08905 148 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Olfr140Q60878 302 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 H2al1eQ810S6 105 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Tmem129Q8K304 362 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Vmn1r216Q8R257 298 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 H2al1mQ9DAD9 105 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav5-1A0A075B5Z7 114 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ighv9-2A0A0B4J1J4 117 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 9430015G10RikA2ASP7 199 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Olfr918E9PVZ7 325 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 6430550D23RikE9Q1X6 194 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Zfp688E9Q5M9 274 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Ly86O88188 162 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 P01736 120 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav7-2Q5R1I3 112 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 BmfQ91ZE9 185 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Pfn3Q9DAD6 137 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trip12G5E870 2025 aaKnown RBP6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Dock7Q8R1A4 2130 aaKnown RBP6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gm9920D3YVZ2 140 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Rnase2O35291 155 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 P01635 115 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 NpsP0C0P8 89 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Defa26Q3L180 93 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Gm10762Q9CZN6 115 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Cbll1Q9JIY2 491 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Rabac1Q9Z0S9 185 aa6.29□□□□□ -1.4
Bdnf-211ENSMUST00000176893 Trav15-2-dv6-2A0A075B650 123 aa6.28□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms