Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Gm25239-201ENSMUST00000174915 86 ntBASIC34.86■■■■□ 3.17
Cfhr1Q61406 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Cfhr1Q61406 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cfhr1Q61406 Gm24109-201ENSMUST00000175489 103 ntBASIC30.33■■■□□ 2.45
Cfhr1Q61406 Gm15042-201ENSMUST00000120212 883 ntBASIC30.18■■■□□ 2.42
Cfhr1Q61406 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cfhr1Q61406 Gm15045-201ENSMUST00000117359 883 ntBASIC29.47■■■□□ 2.31
Cfhr1Q61406 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Cfhr1Q61406 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Cfhr1Q61406 Gm23366-201ENSMUST00000175022 89 ntBASIC29.1■■■□□ 2.25
Cfhr1Q61406 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cfhr1Q61406 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cfhr1Q61406 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.39■■■□□ 2.14
Cfhr1Q61406 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cfhr1Q61406 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
Cfhr1Q61406 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.11■■■□□ 2.09
Cfhr1Q61406 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Cfhr1Q61406 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Cfhr1Q61406 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Cfhr1Q61406 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cfhr1Q61406 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Cfhr1Q61406 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Cfhr1Q61406 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.67■■■□□ 2.02
Cfhr1Q61406 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Cfhr1Q61406 Gm25238-201ENSMUST00000174914 89 ntBASIC27.62■■■□□ 2.01
Cfhr1Q61406 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cfhr1Q61406 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cfhr1Q61406 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.22■■□□□ 1.95
Cfhr1Q61406 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cfhr1Q61406 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
Cfhr1Q61406 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cfhr1Q61406 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cfhr1Q61406 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Cfhr1Q61406 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cfhr1Q61406 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
Cfhr1Q61406 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.79■■□□□ 1.88
Cfhr1Q61406 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.76■■□□□ 1.87
Cfhr1Q61406 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.76■■□□□ 1.87
Cfhr1Q61406 Psd-208ENSMUST00000224556 2034 ntBASIC26.75■■□□□ 1.87
Cfhr1Q61406 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cfhr1Q61406 Gm25262-201ENSMUST00000174934 133 ntBASIC26.62■■□□□ 1.85
Cfhr1Q61406 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cfhr1Q61406 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.48■■□□□ 1.83
Cfhr1Q61406 Gm27325-201ENSMUST00000175467 74 ntBASIC26.42■■□□□ 1.82
Cfhr1Q61406 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cfhr1Q61406 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.27■■□□□ 1.8
Cfhr1Q61406 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cfhr1Q61406 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cfhr1Q61406 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cfhr1Q61406 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.15■■□□□ 1.78
Cfhr1Q61406 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.13■■□□□ 1.77
Cfhr1Q61406 Rab21-202ENSMUST00000218831 843 ntBASIC26.13■■□□□ 1.77
Cfhr1Q61406 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Cfhr1Q61406 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.09■■□□□ 1.77
Cfhr1Q61406 Gm26115-201ENSMUST00000175605 87 ntBASIC26.07■■□□□ 1.76
Cfhr1Q61406 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Cfhr1Q61406 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Cfhr1Q61406 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Cfhr1Q61406 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.92■■□□□ 1.74
Cfhr1Q61406 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Cfhr1Q61406 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cfhr1Q61406 Gm8109-201ENSMUST00000194076 746 ntBASIC25.85■■□□□ 1.73
Cfhr1Q61406 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Cfhr1Q61406 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.83■■□□□ 1.72
Cfhr1Q61406 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Cfhr1Q61406 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cfhr1Q61406 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Cfhr1Q61406 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.74■■□□□ 1.71
Cfhr1Q61406 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cfhr1Q61406 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.68■■□□□ 1.7
Cfhr1Q61406 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Cfhr1Q61406 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.6■■□□□ 1.69
Cfhr1Q61406 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Cfhr1Q61406 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Cfhr1Q61406 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cfhr1Q61406 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cfhr1Q61406 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.54■■□□□ 1.68
Cfhr1Q61406 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.46■■□□□ 1.67
Cfhr1Q61406 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cfhr1Q61406 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cfhr1Q61406 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
Cfhr1Q61406 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cfhr1Q61406 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cfhr1Q61406 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Cfhr1Q61406 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Cfhr1Q61406 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.25■■□□□ 1.63
Cfhr1Q61406 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.2■■□□□ 1.62
Cfhr1Q61406 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.19■■□□□ 1.62
Cfhr1Q61406 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cfhr1Q61406 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Cfhr1Q61406 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cfhr1Q61406 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.13■■□□□ 1.61
Cfhr1Q61406 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
Cfhr1Q61406 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cfhr1Q61406 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Cfhr1Q61406 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.05■■□□□ 1.6
Cfhr1Q61406 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Cfhr1Q61406 Gm24804-201ENSMUST00000174982 85 ntBASIC25.03■■□□□ 1.6
Cfhr1Q61406 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Cfhr1Q61406 Gm27322-201ENSMUST00000184007 104 ntBASIC25.01■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms