Protein–RNA interactions for Protein: A0A0B4J1J4

Ighv9-2, Immunoglobulin heavy variable V9-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-2A0A0B4J1J4 Gm25239-201ENSMUST00000174915 86 ntBASIC30.77■■■□□ 2.52
Ighv9-2A0A0B4J1J4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ighv9-2A0A0B4J1J4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Ighv9-2A0A0B4J1J4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Ighv9-2A0A0B4J1J4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ighv9-2A0A0B4J1J4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Ighv9-2A0A0B4J1J4 Gm15042-201ENSMUST00000120212 883 ntBASIC27.36■■□□□ 1.97
Ighv9-2A0A0B4J1J4 Gm15045-201ENSMUST00000117359 883 ntBASIC26.8■■□□□ 1.88
Ighv9-2A0A0B4J1J4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ighv9-2A0A0B4J1J4 Psd-208ENSMUST00000224556 2034 ntBASIC26.58■■□□□ 1.85
Ighv9-2A0A0B4J1J4 Gm24109-201ENSMUST00000175489 103 ntBASIC26.45■■□□□ 1.82
Ighv9-2A0A0B4J1J4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ighv9-2A0A0B4J1J4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.24■■□□□ 1.79
Ighv9-2A0A0B4J1J4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ighv9-2A0A0B4J1J4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ighv9-2A0A0B4J1J4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ighv9-2A0A0B4J1J4 Gm23366-201ENSMUST00000175022 89 ntBASIC25.81■■□□□ 1.72
Ighv9-2A0A0B4J1J4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ighv9-2A0A0B4J1J4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ighv9-2A0A0B4J1J4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ighv9-2A0A0B4J1J4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ighv9-2A0A0B4J1J4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ighv9-2A0A0B4J1J4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ighv9-2A0A0B4J1J4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Ighv9-2A0A0B4J1J4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ighv9-2A0A0B4J1J4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.59■■□□□ 1.69
Ighv9-2A0A0B4J1J4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Ighv9-2A0A0B4J1J4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ighv9-2A0A0B4J1J4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ighv9-2A0A0B4J1J4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ighv9-2A0A0B4J1J4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.31■■□□□ 1.64
Ighv9-2A0A0B4J1J4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ighv9-2A0A0B4J1J4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ighv9-2A0A0B4J1J4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Ighv9-2A0A0B4J1J4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ighv9-2A0A0B4J1J4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.08■■□□□ 1.61
Ighv9-2A0A0B4J1J4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ighv9-2A0A0B4J1J4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ighv9-2A0A0B4J1J4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.9■■□□□ 1.58
Ighv9-2A0A0B4J1J4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ighv9-2A0A0B4J1J4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ighv9-2A0A0B4J1J4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv9-2A0A0B4J1J4 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.58■■□□□ 1.52
Ighv9-2A0A0B4J1J4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ighv9-2A0A0B4J1J4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.53■■□□□ 1.52
Ighv9-2A0A0B4J1J4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ighv9-2A0A0B4J1J4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ighv9-2A0A0B4J1J4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ighv9-2A0A0B4J1J4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.4■■□□□ 1.5
Ighv9-2A0A0B4J1J4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ighv9-2A0A0B4J1J4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ighv9-2A0A0B4J1J4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ighv9-2A0A0B4J1J4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ighv9-2A0A0B4J1J4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ighv9-2A0A0B4J1J4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ighv9-2A0A0B4J1J4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ighv9-2A0A0B4J1J4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
Ighv9-2A0A0B4J1J4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ighv9-2A0A0B4J1J4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.13■■□□□ 1.45
Ighv9-2A0A0B4J1J4 Gm25238-201ENSMUST00000174914 89 ntBASIC24.12■■□□□ 1.45
Ighv9-2A0A0B4J1J4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Ighv9-2A0A0B4J1J4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ighv9-2A0A0B4J1J4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.06■■□□□ 1.44
Ighv9-2A0A0B4J1J4 Gm27325-201ENSMUST00000175467 74 ntBASIC24.06■■□□□ 1.44
Ighv9-2A0A0B4J1J4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
Ighv9-2A0A0B4J1J4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Ighv9-2A0A0B4J1J4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ighv9-2A0A0B4J1J4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.01■■□□□ 1.43
Ighv9-2A0A0B4J1J4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ighv9-2A0A0B4J1J4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ighv9-2A0A0B4J1J4 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.93■■□□□ 1.42
Ighv9-2A0A0B4J1J4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.89■■□□□ 1.41
Ighv9-2A0A0B4J1J4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ighv9-2A0A0B4J1J4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Ighv9-2A0A0B4J1J4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ighv9-2A0A0B4J1J4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ighv9-2A0A0B4J1J4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ighv9-2A0A0B4J1J4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.59■■□□□ 1.37
Ighv9-2A0A0B4J1J4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Ighv9-2A0A0B4J1J4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ighv9-2A0A0B4J1J4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.56■■□□□ 1.36
Ighv9-2A0A0B4J1J4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.56■■□□□ 1.36
Ighv9-2A0A0B4J1J4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ighv9-2A0A0B4J1J4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.53■■□□□ 1.36
Ighv9-2A0A0B4J1J4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ighv9-2A0A0B4J1J4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv9-2A0A0B4J1J4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Ighv9-2A0A0B4J1J4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ighv9-2A0A0B4J1J4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ighv9-2A0A0B4J1J4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Ighv9-2A0A0B4J1J4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ighv9-2A0A0B4J1J4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ighv9-2A0A0B4J1J4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ighv9-2A0A0B4J1J4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ighv9-2A0A0B4J1J4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ighv9-2A0A0B4J1J4 Rab21-202ENSMUST00000218831 843 ntBASIC23.35■■□□□ 1.33
Ighv9-2A0A0B4J1J4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ighv9-2A0A0B4J1J4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Ighv9-2A0A0B4J1J4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Ighv9-2A0A0B4J1J4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms