Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Gm25239-201ENSMUST00000174915 86 ntBASIC39.2■■■■□ 3.87
Defb28Q3V2L0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
Defb28Q3V2L0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Defb28Q3V2L0 Gm24109-201ENSMUST00000175489 103 ntBASIC34.22■■■■□ 3.07
Defb28Q3V2L0 Gm15042-201ENSMUST00000120212 883 ntBASIC33.79■■■■□ 3
Defb28Q3V2L0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Defb28Q3V2L0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Defb28Q3V2L0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Defb28Q3V2L0 Gm15045-201ENSMUST00000117359 883 ntBASIC32.92■■■□□ 2.86
Defb28Q3V2L0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.71■■■□□ 2.83
Defb28Q3V2L0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Defb28Q3V2L0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.09■■■□□ 2.73
Defb28Q3V2L0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
Defb28Q3V2L0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.72■■■□□ 2.67
Defb28Q3V2L0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Defb28Q3V2L0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Defb28Q3V2L0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Defb28Q3V2L0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Defb28Q3V2L0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Defb28Q3V2L0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.18■■■□□ 2.58
Defb28Q3V2L0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Defb28Q3V2L0 Gm25238-201ENSMUST00000174914 89 ntBASIC31.08■■■□□ 2.57
Defb28Q3V2L0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Defb28Q3V2L0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Defb28Q3V2L0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Defb28Q3V2L0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
Defb28Q3V2L0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Defb28Q3V2L0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Defb28Q3V2L0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
Defb28Q3V2L0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Defb28Q3V2L0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.12■■■□□ 2.41
Defb28Q3V2L0 Gm25262-201ENSMUST00000174934 133 ntBASIC30.07■■■□□ 2.4
Defb28Q3V2L0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.06■■■□□ 2.4
Defb28Q3V2L0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
Defb28Q3V2L0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.03■■■□□ 2.4
Defb28Q3V2L0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
Defb28Q3V2L0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Defb28Q3V2L0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Defb28Q3V2L0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Defb28Q3V2L0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.75■■■□□ 2.35
Defb28Q3V2L0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.63■■■□□ 2.33
Defb28Q3V2L0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.63■■■□□ 2.33
Defb28Q3V2L0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.57■■■□□ 2.32
Defb28Q3V2L0 Gm26115-201ENSMUST00000175605 87 ntBASIC29.53■■■□□ 2.32
Defb28Q3V2L0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.52■■■□□ 2.32
Defb28Q3V2L0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.52■■■□□ 2.32
Defb28Q3V2L0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Defb28Q3V2L0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
Defb28Q3V2L0 Rab21-202ENSMUST00000218831 843 ntBASIC29.32■■■□□ 2.28
Defb28Q3V2L0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.31■■■□□ 2.28
Defb28Q3V2L0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Defb28Q3V2L0 Gm8109-201ENSMUST00000194076 746 ntBASIC29.27■■■□□ 2.28
Defb28Q3V2L0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Defb28Q3V2L0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Defb28Q3V2L0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Defb28Q3V2L0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Defb28Q3V2L0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Defb28Q3V2L0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Defb28Q3V2L0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Defb28Q3V2L0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Defb28Q3V2L0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.9■■■□□ 2.22
Defb28Q3V2L0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Defb28Q3V2L0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.87■■■□□ 2.21
Defb28Q3V2L0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.8■■■□□ 2.2
Defb28Q3V2L0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.8■■■□□ 2.2
Defb28Q3V2L0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Defb28Q3V2L0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Defb28Q3V2L0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Defb28Q3V2L0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.53■■■□□ 2.16
Defb28Q3V2L0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Defb28Q3V2L0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Defb28Q3V2L0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.47■■■□□ 2.15
Defb28Q3V2L0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Defb28Q3V2L0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Defb28Q3V2L0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Defb28Q3V2L0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Defb28Q3V2L0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.37■■■□□ 2.13
Defb28Q3V2L0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Defb28Q3V2L0 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.35■■■□□ 2.13
Defb28Q3V2L0 Psd-208ENSMUST00000224556 2034 ntBASIC28.26■■■□□ 2.12
Defb28Q3V2L0 Gm24804-201ENSMUST00000174982 85 ntBASIC28.26■■■□□ 2.11
Defb28Q3V2L0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.2■■■□□ 2.1
Defb28Q3V2L0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.18■■■□□ 2.1
Defb28Q3V2L0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Defb28Q3V2L0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.14■■■□□ 2.1
Defb28Q3V2L0 Gm27322-201ENSMUST00000184007 104 ntBASIC28.13■■■□□ 2.09
Defb28Q3V2L0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Defb28Q3V2L0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.06■■■□□ 2.08
Defb28Q3V2L0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Defb28Q3V2L0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Defb28Q3V2L0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.98■■■□□ 2.07
Defb28Q3V2L0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.97■■■□□ 2.07
Defb28Q3V2L0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.93■■■□□ 2.06
Defb28Q3V2L0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Defb28Q3V2L0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Defb28Q3V2L0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.86■■■□□ 2.05
Defb28Q3V2L0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Defb28Q3V2L0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Defb28Q3V2L0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Defb28Q3V2L0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms