RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Col4a2P08122 1707 aa10.5□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Arfgef3Q3UGY8 2170 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 P01759 136 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Klf14Q19A41 325 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Defa24Q5G865 93 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Hspb8Q9JK92 196 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Egr4Q9WUF2 478 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm27027S4R1M6 97 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm9920D3YVZ2 140 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Igll1P20764 209 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Mapk1ip1Q9D7G9 263 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Lamtor2Q9JHS3 125 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Wdfy3Q6VNB8 3508 aa10.49□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ighv1-18A0A0A6YXN4 117 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Igkv14-100A0A0G2JG36 117 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm28044L7N1X0 119 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 F2rl1P55086 399 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Slc25a29Q8BL03 306 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Hoxc12Q8K5B8 280 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 P2ry6Q9ERK9 328 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm5129F6YHA9 99 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Higd1cQ76I25 96 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Il22ra1Q80XZ4 581 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Q8BG31 207 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Olfr481Q8VGI5 312 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Frem2Q6NVD0 3160 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm21974F6W3F3 119 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Col8a2P25318 699 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Olfr150Q60895 312 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 MturnQ8CGA4 131 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Cdpf1Q8R3A2 119 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Tmem126aQ9D8Y1 196 aa10.48□□□□□ -0.73
Clcn3-201ENSMUST00000004430 9830107B12RikD3Z5D6 160 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 LfngO09010 378 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 RbpjP31266 526 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Rnase6Q9D244 153 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Timm10bQ9WV96 100 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Iqcf6G3UWF2 157 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Vmn1r60G3UY47 300 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Mfge8P21956 463 aaKnown RBP10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trav6d-4Q5R1I0 115 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Dlx1Q64317 255 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ypel2Q65Z95 119 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Obp2aQ8K1H9 176 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ypel1Q9ESC7 118 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm7173A0A0G2JEB6 3132 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Zfyve26Q5DU37 2529 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Trav7n-4A0A075B620 113 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ighv5-16A0A0B4J1P4 117 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm20825J3QM67 227 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 P01783 136 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ssty2Q149W4 227 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm21394Q497R7 227 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm20854Q62461 227 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ube2d2bQ6ZWY6 147 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Nkx3-1P97436 237 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Prss46Q5M8S2 314 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Gm10277Q6R5C6 214 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Ubald2Q8BQH4 164 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Lmo1Q924W9 156 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 LenepQ9WVB6 61 aa10.47□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Igkv13-84A0A140T8N3 115 aa10.46□□□□□ -0.73
Clcn3-201ENSMUST00000004430 BokO35425 213 aa10.46□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Zfp36l1P23950 338 aa10.46□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Cbln3Q9JHG0 197 aa10.46□□□□□ -0.73
Clcn3-201ENSMUST00000004430 Tcrg-C2A0A075B5Z2 167 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 A0A1L1SR50 188 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 P01680 129 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 P01853 167 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Htr1dQ61224 374 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 AgerQ62151 402 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Mrpl33Q9CQP0 65 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Lyrm7Q9DA03 104 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Esp4A8R0T8 117 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Gm10073E9Q3T0 114 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Tcl1b2P56841 117 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Trpt1Q8K3A2 249 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 RpeQ8VEE0 228 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Olfr981Q8VEU2 310 aa10.46□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Fer1l4A3KGK3 1992 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Brca2P97929 3329 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Bet1lO35153 111 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Ndfip1Q8R0W6 221 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 TgfaP48030 159 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Isg15Q64339 161 aaKnown RBP10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Sh2d6Q9D413 297 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Tnfrsf13bQ9ET35 249 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Gm45844A0A1B0GRQ2 137 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Vmn1r1E9PVR6 306 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Tmem241Q3UME2 297 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Clec4b2Q67DU8 208 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Slamf7Q8BHK6 333 aa10.45□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Iglv1A0A075B663 117 aa10.44□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Icam2P35330 277 aa10.44□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Gatad1Q920S3 266 aa10.44□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Ndufb3Q9CQZ6 104 aa10.44□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Col13a1Q9R1N9 751 aa10.44□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Trav9-1A0A075B601 112 aa10.44□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Klk1b22P15948 259 aa10.44□□□□□ -0.74
Clcn3-201ENSMUST00000004430 Smim6Q3U0I6 56 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms