Protein–RNA interactions for Protein: G3UY47

Vmn1r60, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r60G3UY47 Gm25239-201ENSMUST00000174915 86 ntBASIC30.86■■■□□ 2.53
Vmn1r60G3UY47 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Vmn1r60G3UY47 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Vmn1r60G3UY47 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Vmn1r60G3UY47 Gm15042-201ENSMUST00000120212 883 ntBASIC27.25■■□□□ 1.95
Vmn1r60G3UY47 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Vmn1r60G3UY47 Gm24109-201ENSMUST00000175489 103 ntBASIC26.6■■□□□ 1.85
Vmn1r60G3UY47 Gm15045-201ENSMUST00000117359 883 ntBASIC26.58■■□□□ 1.85
Vmn1r60G3UY47 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Vmn1r60G3UY47 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Vmn1r60G3UY47 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Vmn1r60G3UY47 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Vmn1r60G3UY47 Gm23366-201ENSMUST00000175022 89 ntBASIC25.89■■□□□ 1.74
Vmn1r60G3UY47 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Vmn1r60G3UY47 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Vmn1r60G3UY47 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.53■■□□□ 1.68
Vmn1r60G3UY47 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Vmn1r60G3UY47 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Vmn1r60G3UY47 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Vmn1r60G3UY47 Psd-208ENSMUST00000224556 2034 ntBASIC25.25■■□□□ 1.63
Vmn1r60G3UY47 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vmn1r60G3UY47 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Vmn1r60G3UY47 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Vmn1r60G3UY47 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vmn1r60G3UY47 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vmn1r60G3UY47 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vmn1r60G3UY47 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.97■■□□□ 1.59
Vmn1r60G3UY47 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.94■■□□□ 1.58
Vmn1r60G3UY47 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vmn1r60G3UY47 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Vmn1r60G3UY47 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.61■■□□□ 1.53
Vmn1r60G3UY47 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.59■■□□□ 1.53
Vmn1r60G3UY47 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vmn1r60G3UY47 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
Vmn1r60G3UY47 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vmn1r60G3UY47 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r60G3UY47 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.35■■□□□ 1.49
Vmn1r60G3UY47 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Vmn1r60G3UY47 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Vmn1r60G3UY47 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Vmn1r60G3UY47 Gm25238-201ENSMUST00000174914 89 ntBASIC24.23■■□□□ 1.47
Vmn1r60G3UY47 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.23■■□□□ 1.47
Vmn1r60G3UY47 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vmn1r60G3UY47 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vmn1r60G3UY47 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vmn1r60G3UY47 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Vmn1r60G3UY47 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vmn1r60G3UY47 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vmn1r60G3UY47 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Vmn1r60G3UY47 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Vmn1r60G3UY47 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.9■■□□□ 1.42
Vmn1r60G3UY47 Gm27325-201ENSMUST00000175467 74 ntBASIC23.88■■□□□ 1.41
Vmn1r60G3UY47 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vmn1r60G3UY47 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.85■■□□□ 1.41
Vmn1r60G3UY47 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Vmn1r60G3UY47 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vmn1r60G3UY47 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.69■■□□□ 1.38
Vmn1r60G3UY47 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.68■■□□□ 1.38
Vmn1r60G3UY47 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Vmn1r60G3UY47 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Vmn1r60G3UY47 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.64■■□□□ 1.37
Vmn1r60G3UY47 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.61■■□□□ 1.37
Vmn1r60G3UY47 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Vmn1r60G3UY47 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Vmn1r60G3UY47 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
Vmn1r60G3UY47 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Vmn1r60G3UY47 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r60G3UY47 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r60G3UY47 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vmn1r60G3UY47 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Vmn1r60G3UY47 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Vmn1r60G3UY47 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Vmn1r60G3UY47 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Vmn1r60G3UY47 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Vmn1r60G3UY47 Rab21-202ENSMUST00000218831 843 ntBASIC23.35■■□□□ 1.33
Vmn1r60G3UY47 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.33■■□□□ 1.32
Vmn1r60G3UY47 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Vmn1r60G3UY47 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r60G3UY47 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Vmn1r60G3UY47 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.25■■□□□ 1.31
Vmn1r60G3UY47 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Vmn1r60G3UY47 Gm25262-201ENSMUST00000174934 133 ntBASIC23.24■■□□□ 1.31
Vmn1r60G3UY47 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.24■■□□□ 1.31
Vmn1r60G3UY47 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.17■■□□□ 1.3
Vmn1r60G3UY47 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r60G3UY47 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r60G3UY47 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r60G3UY47 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vmn1r60G3UY47 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vmn1r60G3UY47 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Vmn1r60G3UY47 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Vmn1r60G3UY47 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.95■■□□□ 1.26
Vmn1r60G3UY47 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vmn1r60G3UY47 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Vmn1r60G3UY47 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.88■■□□□ 1.25
Vmn1r60G3UY47 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.86■■□□□ 1.25
Vmn1r60G3UY47 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.84■■□□□ 1.25
Vmn1r60G3UY47 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vmn1r60G3UY47 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Vmn1r60G3UY47 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms