RNA–Protein interactions for RNA: YMR045C

YMR045C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR045C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR045CYMR045C RAD7P06779 565 aa1.97□□□□□ -2.09
YMR045CYMR045C APE1P14904 514 aa1.97□□□□□ -2.09
YMR045CYMR045C PRE9P23638 258 aaKnown RBP1.97□□□□□ -2.09
YMR045CYMR045C YDJ1P25491 409 aaKnown RBP1.97□□□□□ -2.09
YMR045CYMR045C ARE1P25628 610 aa1.97□□□□□ -2.09
YMR045CYMR045C CDC15P27636 974 aa1.97□□□□□ -2.09
YMR045CYMR045C AFG1P32317 509 aa1.97□□□□□ -2.09
YMR045CYMR045C YKL187CP34231 750 aa1.97□□□□□ -2.09
YMR045CYMR045C LOT5P34234 306 aa1.97□□□□□ -2.09
YMR045CYMR045C MRX3P38172 270 aa1.97□□□□□ -2.09
YMR045CYMR045C CHS7P38843 316 aa1.97□□□□□ -2.09
YMR045CYMR045C REV7P38927 245 aa1.97□□□□□ -2.09
YMR045CYMR045C PMC1P38929 1173 aaPredicted RBP1.97□□□□□ -2.09
YMR045CYMR045C YAL037WP39728 267 aa1.97□□□□□ -2.09
YMR045CYMR045C UTP7P40055 554 aaKnown RBP1.97□□□□□ -2.09
YMR045CYMR045C ROM1P53046 1155 aa1.97□□□□□ -2.09
YMR045CYMR045C YGR111WP53265 400 aa1.97□□□□□ -2.09
YMR045CYMR045C APM1Q00776 475 aaPredicted RBP1.97□□□□□ -2.09
YMR045CYMR045C DOT1Q04089 582 aaKnown RBP1.97□□□□□ -2.09
YMR045CYMR045C YPL216WQ08964 1102 aa1.97□□□□□ -2.09
YMR045CYMR045C LDB19Q12502 818 aa1.97□□□□□ -2.09
YMR045CYMR045C STE7P06784 515 aa1.96□□□□□ -2.1
YMR045CYMR045C HSF1P10961 833 aa1.96□□□□□ -2.1
YMR045CYMR045C HMG2P12684 1045 aa1.96□□□□□ -2.1
YMR045CYMR045C PFK2P16862 959 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
YMR045CYMR045C EXO70P19658 623 aa1.96□□□□□ -2.1
YMR045CYMR045C SWI4P25302 1093 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C CAP1P28495 268 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C DUT1P33317 147 aa1.96□□□□□ -2.1
YMR045CYMR045C YKL075CP36083 450 aa1.96□□□□□ -2.1
YMR045CYMR045C SBE22P38814 852 aa1.96□□□□□ -2.1
YMR045CYMR045C AXL2P38928 823 aa1.96□□□□□ -2.1
YMR045CYMR045C CEM1P39525 442 aa1.96□□□□□ -2.1
YMR045CYMR045C AIM9P40053 627 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C DOT6P40059 670 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C SCC4P40090 624 aa1.96□□□□□ -2.1
YMR045CYMR045C TIF34P40217 347 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C RET2P43621 546 aa1.96□□□□□ -2.1
YMR045CYMR045C PRY3P47033 881 aa1.96□□□□□ -2.1
YMR045CYMR045C APS3P47064 194 aa1.96□□□□□ -2.1
YMR045CYMR045C MNN10P50108 393 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C NUP84P52891 726 aa1.96□□□□□ -2.1
YMR045CYMR045C GET1P53192 235 aa1.96□□□□□ -2.1
YMR045CYMR045C YGR127WP53275 312 aa1.96□□□□□ -2.1
YMR045CYMR045C CAF130P53280 1122 aaPredicted RBP1.96□□□□□ -2.1
YMR045CYMR045C HOL1P53389 586 aa1.96□□□□□ -2.1
YMR045CYMR045C CPR8P53728 308 aa1.96□□□□□ -2.1
YMR045CYMR045C ISU1Q03020 165 aa1.96□□□□□ -2.1
YMR045CYMR045C RLI1Q03195 608 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C FCP1Q03254 732 aa1.96□□□□□ -2.1
YMR045CYMR045C YML020WQ03722 664 aa1.96□□□□□ -2.1
YMR045CYMR045C SYF1Q04048 859 aaPredicted RBP1.96□□□□□ -2.1
YMR045CYMR045C SNX41Q04053 625 aa1.96□□□□□ -2.1
YMR045CYMR045C YLR177WQ06251 628 aa1.96□□□□□ -2.1
YMR045CYMR045C BRE4Q07660 1125 aa1.96□□□□□ -2.1
YMR045CYMR045C AAD15Q08361 143 aa1.96□□□□□ -2.1
YMR045CYMR045C ENV9Q08651 330 aa1.96□□□□□ -2.1
YMR045CYMR045C PER33Q12144 273 aa1.96□□□□□ -2.1
YMR045CYMR045C PTC5Q12511 572 aa1.96□□□□□ -2.1
YMR045CYMR045C CSR2Q12734 1121 aa1.96□□□□□ -2.1
YMR045CYMR045C YJR112W-AQ3E743 109 aa1.96□□□□□ -2.1
YMR045CYMR045C KTI11Q3E840 82 aa1.96□□□□□ -2.1
YMR045CYMR045C DNF1P32660 1571 aa1.96□□□□□ -2.1
YMR045CYMR045C CTT1P06115 562 aa1.96□□□□□ -2.1
YMR045CYMR045C CDC21P06785 304 aa1.96□□□□□ -2.1
YMR045CYMR045C HIS5P07172 385 aa1.96□□□□□ -2.1
YMR045CYMR045C CBP6P07253 162 aaPredicted RBP1.96□□□□□ -2.1
YMR045CYMR045C TOP3P13099 656 aa1.96□□□□□ -2.1
YMR045CYMR045C PMR1P13586 950 aa1.96□□□□□ -2.1
YMR045CYMR045C MSM1P22438 575 aa1.96□□□□□ -2.1
YMR045CYMR045C ECM21P38167 1117 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C PRE3P38624 215 aa1.96□□□□□ -2.1
YMR045CYMR045C SKN7P38889 622 aa1.96□□□□□ -2.1
YMR045CYMR045C COX15P40086 486 aa1.96□□□□□ -2.1
YMR045CYMR045C QRI1P43123 477 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C SKI6P46948 246 aaPredicted RBP1.96□□□□□ -2.1
YMR045CYMR045C MDV1P47025 714 aa1.96□□□□□ -2.1
YMR045CYMR045C HXT16P47185 567 aa1.96□□□□□ -2.1
YMR045CYMR045C JAC1P53193 184 aa1.96□□□□□ -2.1
YMR045CYMR045C MRPS35P53292 345 aa1.96□□□□□ -2.1
YMR045CYMR045C RPT6Q01939 405 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C UBP16Q02863 499 aa1.96□□□□□ -2.1
YMR045CYMR045C PRP42Q03776 544 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C SSL1Q04673 461 aaPredicted RBP1.96□□□□□ -2.1
YMR045CYMR045C FMP25Q08023 583 aa1.96□□□□□ -2.1
YMR045CYMR045C TRE2Q08693 809 aa1.96□□□□□ -2.1
YMR045CYMR045C YTM1Q12024 460 aaPredicted RBP1.96□□□□□ -2.1
YMR045CYMR045C ACF2Q12168 779 aa1.96□□□□□ -2.1
YMR045CYMR045C RGT2Q12300 763 aa1.96□□□□□ -2.1
YMR045CYMR045C SKI3P17883 1432 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C TEF1P02994 458 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C SUI2P20459 304 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C PRE8P23639 250 aa1.96□□□□□ -2.1
YMR045CYMR045C ADP1P25371 1049 aa1.96□□□□□ -2.1
YMR045CYMR045C ATG15P25641 520 aa1.96□□□□□ -2.1
YMR045CYMR045C CMK1P27466 446 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C CSE2P33308 149 aa1.96□□□□□ -2.1
YMR045CYMR045C MIA40P36046 403 aa1.96□□□□□ -2.1
YMR045CYMR045C SRP72P38688 640 aaKnown RBP1.96□□□□□ -2.1
YMR045CYMR045C SMF2P38778 549 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms