RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W ISM1P48526 1002 aa7.71□□□□□ -1.18
PEX28YHR150W RNY1Q02933 434 aaKnown RBP7.71□□□□□ -1.18
PEX28YHR150W YDR476CQ03362 224 aa7.71□□□□□ -1.18
PEX28YHR150W MEU1Q07938 337 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
PEX28YHR150W NOT5Q12514 560 aaPredicted RBP7.71□□□□□ -1.18
PEX28YHR150W PCD1Q12524 340 aa7.71□□□□□ -1.18
PEX28YHR150W CTF3Q12748 733 aa7.71□□□□□ -1.18
PEX28YHR150W ENO2P00925 437 aaKnown RBP7.7□□□□□ -1.18
PEX28YHR150W ADE2P21264 571 aaKnown RBP7.7□□□□□ -1.18
PEX28YHR150W TGL4P36165 910 aa7.7□□□□□ -1.18
PEX28YHR150W DIA4P38705 446 aaPredicted RBP7.7□□□□□ -1.18
PEX28YHR150W TDA11P38854 504 aa7.7□□□□□ -1.18
PEX28YHR150W CHS6P40955 746 aa7.7□□□□□ -1.18
PEX28YHR150W VTC4P47075 721 aa7.7□□□□□ -1.18
PEX28YHR150W AZR1P50080 613 aa7.7□□□□□ -1.18
PEX28YHR150W MIG2P53035 382 aa7.7□□□□□ -1.18
PEX28YHR150W DOS2P54858 310 aa7.7□□□□□ -1.18
PEX28YHR150W MUB1Q03162 620 aa7.7□□□□□ -1.18
PEX28YHR150W YMR160WQ03823 816 aa7.7□□□□□ -1.18
PEX28YHR150W RKM2Q03942 479 aa7.7□□□□□ -1.18
PEX28YHR150W YPR202WQ08993 238 aa7.7□□□□□ -1.18
PEX28YHR150W TOM1Q03280 3268 aa7.7□□□□□ -1.18
PEX28YHR150W KEX2P13134 814 aa7.69□□□□□ -1.18
PEX28YHR150W VPS3P23643 1011 aa7.69□□□□□ -1.18
PEX28YHR150W MEF1P25039 761 aa7.69□□□□□ -1.18
PEX28YHR150W RPT1P33299 467 aaKnown RBP7.69□□□□□ -1.18
PEX28YHR150W SRB2P34162 210 aa7.69□□□□□ -1.18
PEX28YHR150W SIP2P34164 415 aaKnown RBP7.69□□□□□ -1.18
PEX28YHR150W CUE2P36075 443 aaKnown RBP7.69□□□□□ -1.18
PEX28YHR150W UBP14P38237 781 aaKnown RBP7.69□□□□□ -1.18
PEX28YHR150W TSC10P38342 320 aa7.69□□□□□ -1.18
PEX28YHR150W FRT2P39734 528 aa7.69□□□□□ -1.18
PEX28YHR150W AVT2P39981 480 aa7.69□□□□□ -1.18
PEX28YHR150W YFL012WP43580 148 aa7.69□□□□□ -1.18
PEX28YHR150W FMP33P46998 180 aa7.69□□□□□ -1.18
PEX28YHR150W YGR016WP53209 190 aa7.69□□□□□ -1.18
PEX28YHR150W RPM2Q02773 1202 aa7.69□□□□□ -1.18
PEX28YHR150W CUE5Q08412 411 aaKnown RBP7.69□□□□□ -1.18
PEX28YHR150W YLL056CQ12177 298 aa7.69□□□□□ -1.18
PEX28YHR150W GPA2P10823 449 aa7.69□□□□□ -1.18
PEX28YHR150W YAK1P14680 807 aa7.69□□□□□ -1.18
PEX28YHR150W VPS34P22543 875 aa7.69□□□□□ -1.18
PEX28YHR150W GFD2P25370 566 aaKnown RBP7.69□□□□□ -1.18
PEX28YHR150W FRE1P32791 686 aa7.69□□□□□ -1.18
PEX28YHR150W CSE2P33308 149 aa7.69□□□□□ -1.18
PEX28YHR150W AST1P35183 429 aa7.69□□□□□ -1.18
PEX28YHR150W ERP2P39704 215 aa7.69□□□□□ -1.18
PEX28YHR150W STL1P39932 569 aa7.69□□□□□ -1.18
PEX28YHR150W HOS4P40480 1083 aa7.69□□□□□ -1.18
PEX28YHR150W POL31P46957 487 aa7.69□□□□□ -1.18
PEX28YHR150W PFD1P46988 109 aa7.69□□□□□ -1.18
PEX28YHR150W NUT1P53114 1132 aa7.69□□□□□ -1.18
PEX28YHR150W HST2P53686 357 aa7.69□□□□□ -1.18
PEX28YHR150W NOP13P53883 403 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
PEX28YHR150W SLT2Q00772 484 aa7.69□□□□□ -1.18
PEX28YHR150W YMR209CQ03648 457 aa7.69□□□□□ -1.18
PEX28YHR150W TIF35Q04067 274 aaKnown RBP7.69□□□□□ -1.18
PEX28YHR150W BCP1Q06338 283 aa7.69□□□□□ -1.18
PEX28YHR150W DNL4Q08387 944 aaPredicted RBP7.69□□□□□ -1.18
PEX28YHR150W VPS5Q92331 675 aa7.69□□□□□ -1.18
PEX28YHR150W CYM1P32898 989 aa7.68□□□□□ -1.18
PEX28YHR150W BUD2P33314 1104 aa7.68□□□□□ -1.18
PEX28YHR150W KES1P35844 434 aaKnown RBP7.68□□□□□ -1.18
PEX28YHR150W RIM2P38127 377 aa7.68□□□□□ -1.18
PEX28YHR150W PHO89P38361 574 aa7.68□□□□□ -1.18
PEX28YHR150W PPX1P38698 397 aa7.68□□□□□ -1.18
PEX28YHR150W SSP120P39931 234 aaKnown RBP7.68□□□□□ -1.18
PEX28YHR150W GCV2P49095 1034 aa7.68□□□□□ -1.18
PEX28YHR150W THI20Q08224 551 aa7.68□□□□□ -1.18
PEX28YHR150W VPS54Q12071 889 aa7.68□□□□□ -1.18
PEX28YHR150W REC8Q12188 680 aa7.68□□□□□ -1.18
PEX28YHR150W ECM29P38737 1868 aa7.67□□□□□ -1.18
PEX28YHR150W MSD1P15179 658 aaKnown RBP7.67□□□□□ -1.18
PEX28YHR150W PDC5P16467 563 aaKnown RBP7.67□□□□□ -1.18
PEX28YHR150W SAT4P25333 603 aaKnown RBP7.67□□□□□ -1.18
PEX28YHR150W RSA4P25382 515 aaKnown RBP7.67□□□□□ -1.18
PEX28YHR150W URA10P30402 227 aa7.67□□□□□ -1.18
PEX28YHR150W RRP14P36080 434 aaKnown RBP7.67□□□□□ -1.18
PEX28YHR150W UBX7P38349 436 aa7.67□□□□□ -1.18
PEX28YHR150W YGR283CP53336 341 aaPredicted RBP7.67□□□□□ -1.18
PEX28YHR150W YNL108CP53929 270 aa7.67□□□□□ -1.18
PEX28YHR150W HMO1Q03973 246 aaKnown RBP7.67□□□□□ -1.18
PEX28YHR150W YET2Q04210 160 aa7.67□□□□□ -1.18
PEX28YHR150W DIS3Q08162 1001 aaKnown RBP7.67□□□□□ -1.18
PEX28YHR150W THI21Q08975 551 aa7.67□□□□□ -1.18
PEX28YHR150W YOR022CQ12204 715 aa7.67□□□□□ -1.18
PEX28YHR150W CIT2P08679 460 aa7.66□□□□□ -1.18
PEX28YHR150W AMS1P22855 1083 aa7.66□□□□□ -1.18
PEX28YHR150W TSR4P25040 408 aa7.66□□□□□ -1.18
PEX28YHR150W GAC1P28006 793 aa7.66□□□□□ -1.18
PEX28YHR150W YKR078WP36158 585 aaKnown RBP7.66□□□□□ -1.18
PEX28YHR150W ABZ1P37254 787 aaPredicted RBP7.66□□□□□ -1.18
PEX28YHR150W SHE3P38272 425 aaKnown RBP7.66□□□□□ -1.18
PEX28YHR150W HSL7P38274 827 aa7.66□□□□□ -1.18
PEX28YHR150W SCS2P40075 244 aaKnown RBP7.66□□□□□ -1.18
PEX28YHR150W MAM33P40513 266 aa7.66□□□□□ -1.18
PEX28YHR150W SLU7Q02775 382 aaKnown RBP7.66□□□□□ -1.18
PEX28YHR150W INA17Q02888 182 aa7.66□□□□□ -1.18
PEX28YHR150W TVP15Q03860 143 aa7.66□□□□□ -1.18
PEX28YHR150W TPO1Q07824 586 aa7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 395.5 ms