RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W VPS15P22219 1454 aa9.4□□□□□ -0.91
SSO1YPL232W DRS2P39524 1355 aa9.37□□□□□ -0.91
SSO1YPL232W NUP159P40477 1460 aa9.36□□□□□ -0.91
SSO1YPL232W RPO21P04050 1733 aaKnown RBP9.34□□□□□ -0.91
SSO1YPL232W DRS1P32892 752 aaKnown RBP9.33□□□□□ -0.92
SSO1YPL232W POL1P13382 1468 aa9.28□□□□□ -0.92
SSO1YPL232W SPP41P38904 1435 aa9.26□□□□□ -0.93
SSO1YPL232W SMC4Q12267 1418 aa9.25□□□□□ -0.93
SSO1YPL232W VTH1P40438 1549 aa9.25□□□□□ -0.93
SSO1YPL232W VTH2P40890 1549 aa9.25□□□□□ -0.93
SSO1YPL232W SPO14P36126 1683 aa9.23□□□□□ -0.93
SSO1YPL232W YOR1P53049 1477 aa9.23□□□□□ -0.93
SSO1YPL232W YOR093CQ12275 1648 aa9.23□□□□□ -0.93
SSO1YPL232W NUP170P38181 1502 aa9.22□□□□□ -0.93
SSO1YPL232W TSC11P40061 1430 aa9.2□□□□□ -0.94
SSO1YPL232W DOP1Q03921 1698 aa9.18□□□□□ -0.94
SSO1YPL232W STU1P38198 1513 aa9.15□□□□□ -0.95
SSO1YPL232W ULS1Q08562 1619 aa9.13□□□□□ -0.95
SSO1YPL232W MYO4P32492 1471 aa9.12□□□□□ -0.95
SSO1YPL232W SNT2P53127 1403 aa9.12□□□□□ -0.95
SSO1YPL232W SNQ2P32568 1501 aaKnown RBP9.09□□□□□ -0.95
SSO1YPL232W PDR12Q02785 1511 aa9.03□□□□□ -0.96
SSO1YPL232W TRM3Q07527 1436 aa9.02□□□□□ -0.97
SSO1YPL232W MLP2P40457 1679 aa8.98□□□□□ -0.97
SSO1YPL232W GDB1Q06625 1536 aa8.97□□□□□ -0.97
SSO1YPL232W PDR10P51533 1564 aa8.96□□□□□ -0.97
SSO1YPL232W CHC1P22137 1653 aaKnown RBP8.96□□□□□ -0.98
SSO1YPL232W IQG1Q12280 1495 aa8.95□□□□□ -0.98
SSO1YPL232W DNF3Q12674 1656 aa8.94□□□□□ -0.98
SSO1YPL232W MET10P39692 1035 aa8.94□□□□□ -0.98
SSO1YPL232W PRY3P47033 881 aa8.91□□□□□ -0.98
SSO1YPL232W BUD3P25558 1636 aa8.91□□□□□ -0.98
SSO1YPL232W ARO1P08566 1588 aaKnown RBP8.9□□□□□ -0.98
SSO1YPL232W PDR15Q04182 1529 aaKnown RBP8.9□□□□□ -0.98
SSO1YPL232W STH1P32597 1359 aa8.86□□□□□ -0.99
SSO1YPL232W NUP157P40064 1391 aaKnown RBP8.82□□□□□ -1
SSO1YPL232W YTA7P40340 1379 aa8.81□□□□□ -1
SSO1YPL232W USO1P25386 1790 aa8.77□□□□□ -1.01
SSO1YPL232W RTT106P40161 455 aa8.76□□□□□ -1.01
SSO1YPL232W SEC7P11075 2009 aaKnown RBP8.75□□□□□ -1.01
SSO1YPL232W TY3B-GQ99315 1547 aa8.74□□□□□ -1.01
SSO1YPL232W YBT1P32386 1661 aa8.63□□□□□ -1.03
SSO1YPL232W YAP3P38749 330 aa8.62□□□□□ -1.03
SSO1YPL232W MAK10Q02197 733 aa8.59□□□□□ -1.03
SSO1YPL232W PRI1P10363 409 aa8.58□□□□□ -1.04
SSO1YPL232W AAD16Q02895 342 aa8.58□□□□□ -1.04
SSO1YPL232W BNR1P40450 1375 aa8.58□□□□□ -1.04
SSO1YPL232W YSP2Q06681 1438 aa8.57□□□□□ -1.04
SSO1YPL232W TY1B-NL2Q99337 1749 aaKnown RBP8.56□□□□□ -1.04
SSO1YPL232W CAT8P39113 1433 aa8.54□□□□□ -1.04
SSO1YPL232W NUP188P52593 1655 aaKnown RBP8.53□□□□□ -1.04
SSO1YPL232W IML1P47170 1584 aa8.52□□□□□ -1.05
SSO1YPL232W HAP1P0CE41 1502 aa8.51□□□□□ -1.05
SSO1YPL232W YCK3P39962 524 aa8.44□□□□□ -1.06
SSO1YPL232W THI12P42883 340 aa8.42□□□□□ -1.06
SSO1YPL232W THI5P43534 340 aa8.42□□□□□ -1.06
SSO1YPL232W THI11P47183 340 aa8.42□□□□□ -1.06
SSO1YPL232W URN1Q06525 465 aaKnown RBP8.42□□□□□ -1.06
SSO1YPL232W THI13Q07748 340 aa8.42□□□□□ -1.06
SSO1YPL232W GEA1P47102 1408 aaPredicted RBP8.42□□□□□ -1.06
SSO1YPL232W YMR196WQ04336 1088 aa8.4□□□□□ -1.06
SSO1YPL232W ISW2Q08773 1120 aa8.4□□□□□ -1.06
SSO1YPL232W TAF7Q05021 590 aa8.38□□□□□ -1.07
SSO1YPL232W VMR1P38735 1592 aa8.38□□□□□ -1.07
SSO1YPL232W IFH1P39520 1085 aa8.37□□□□□ -1.07
SSO1YPL232W SAS10Q12136 610 aaPredicted RBP8.37□□□□□ -1.07
SSO1YPL232W GLN1P32288 370 aaKnown RBP8.36□□□□□ -1.07
SSO1YPL232W CKB1P43639 278 aa8.36□□□□□ -1.07
SSO1YPL232W YAH1Q12184 172 aaKnown RBP8.32□□□□□ -1.08
SSO1YPL232W IPL1P38991 367 aa8.3□□□□□ -1.08
SSO1YPL232W HAA1Q12753 694 aaKnown RBP8.28□□□□□ -1.08
SSO1YPL232W RPG1P38249 964 aaKnown RBP8.27□□□□□ -1.09
SSO1YPL232W SRB8P25648 1427 aa8.25□□□□□ -1.09
SSO1YPL232W YIL055CP40523 627 aaKnown RBP8.24□□□□□ -1.09
SSO1YPL232W TYS1P36421 394 aaKnown RBP8.23□□□□□ -1.09
SSO1YPL232W APP1P53933 587 aa8.2□□□□□ -1.1
SSO1YPL232W BCK1Q01389 1478 aa8.19□□□□□ -1.1
SSO1YPL232W PDR5P33302 1511 aaKnown RBP8.18□□□□□ -1.1
SSO1YPL232W PTP3P40048 928 aa8.16□□□□□ -1.1
SSO1YPL232W YRF1-2P40105 1681 aa8.16□□□□□ -1.1
SSO1YPL232W YMR074CQ04773 145 aa8.13□□□□□ -1.11
SSO1YPL232W CFT1Q06632 1357 aaKnown RBP8.11□□□□□ -1.11
SSO1YPL232W GCN2P15442 1659 aa8.11□□□□□ -1.11
SSO1YPL232W PDR11P40550 1411 aa8.11□□□□□ -1.11
SSO1YPL232W BUD21Q08492 214 aaPredicted RBP8.09□□□□□ -1.11
SSO1YPL232W TSR3Q12094 313 aaKnown RBP8.09□□□□□ -1.11
SSO1YPL232W NUP192P47054 1683 aa8.06□□□□□ -1.12
SSO1YPL232W REB1P21538 810 aa8.06□□□□□ -1.12
SSO1YPL232W KRE5P22023 1365 aa8.06□□□□□ -1.12
SSO1YPL232W DIP2Q12220 943 aaPredicted RBP8.05□□□□□ -1.12
SSO1YPL232W RRP5Q05022 1729 aaKnown RBP8.05□□□□□ -1.12
SSO1YPL232W BUD31P25337 157 aaPredicted RBP8.01□□□□□ -1.13
SSO1YPL232W YNR029CP53729 429 aaKnown RBP8□□□□□ -1.13
SSO1YPL232W RIA1P53893 1110 aa7.99□□□□□ -1.13
SSO1YPL232W ENT1Q12518 454 aa7.99□□□□□ -1.13
SSO1YPL232W ENV9Q08651 330 aa7.97□□□□□ -1.13
SSO1YPL232W IMH1Q06704 911 aaKnown RBP7.96□□□□□ -1.14
SSO1YPL232W MRX12P47084 519 aa7.95□□□□□ -1.14
SSO1YPL232W TY3B-IQ7LHG5 1498 aaKnown RBP7.94□□□□□ -1.14
SSO1YPL232W TY4B-HP0C2J7 1802 aa7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms