RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C PTC3P34221 468 aaKnown RBP10.02□□□□□ -0.81
CLP1YOR250C DCW1P36091 449 aa10.01□□□□□ -0.81
CLP1YOR250C NCR1Q12200 1170 aa9.99□□□□□ -0.81
CLP1YOR250C GUT1P32190 709 aa9.98□□□□□ -0.81
CLP1YOR250C ATH1P48016 1211 aa9.97□□□□□ -0.81
CLP1YOR250C DAN4P47179 1161 aa9.96□□□□□ -0.82
CLP1YOR250C BMT6Q12291 365 aa9.95□□□□□ -0.82
CLP1YOR250C PTC4P38089 393 aa9.94□□□□□ -0.82
CLP1YOR250C YEL023CP39992 682 aa9.94□□□□□ -0.82
CLP1YOR250C TFG1P41895 735 aaPredicted RBP9.91□□□□□ -0.82
CLP1YOR250C YDL129WQ07555 291 aa9.83□□□□□ -0.84
CLP1YOR250C SET1P38827 1080 aaKnown RBP9.82□□□□□ -0.84
CLP1YOR250C NST1P53935 1240 aa9.82□□□□□ -0.84
CLP1YOR250C SOL3P38858 249 aa9.8□□□□□ -0.84
CLP1YOR250C AI4P03878 556 aa9.77□□□□□ -0.85
CLP1YOR250C MPH3P0CE00 602 aa9.76□□□□□ -0.85
CLP1YOR250C SAP30P38429 201 aa9.76□□□□□ -0.85
CLP1YOR250C YGR273CP53329 174 aa9.75□□□□□ -0.85
CLP1YOR250C IFH1P39520 1085 aa9.71□□□□□ -0.86
CLP1YOR250C PML39Q03760 334 aa9.71□□□□□ -0.86
CLP1YOR250C CHL1P22516 861 aaPredicted RBP9.65□□□□□ -0.86
CLP1YOR250C ILV3P39522 585 aaKnown RBP9.65□□□□□ -0.86
CLP1YOR250C PRE3P38624 215 aa9.64□□□□□ -0.87
CLP1YOR250C YPR148CQ06523 435 aa9.62□□□□□ -0.87
CLP1YOR250C MID1P41821 548 aa9.59□□□□□ -0.87
CLP1YOR250C KEX1P09620 729 aa9.57□□□□□ -0.88
CLP1YOR250C ARH1P48360 493 aa9.57□□□□□ -0.88
CLP1YOR250C PEX29Q03370 554 aa9.56□□□□□ -0.88
CLP1YOR250C UBP14P38237 781 aaKnown RBP9.55□□□□□ -0.88
CLP1YOR250C ELP4Q02884 456 aaKnown RBP9.55□□□□□ -0.88
CLP1YOR250C SLI15P38283 698 aa9.54□□□□□ -0.88
CLP1YOR250C YLR326WQ06170 240 aaKnown RBP9.54□□□□□ -0.88
CLP1YOR250C YDR344CQ05510 147 aa9.52□□□□□ -0.89
CLP1YOR250C VHR2P40041 505 aa9.51□□□□□ -0.89
CLP1YOR250C MPC54Q08550 464 aa9.51□□□□□ -0.89
CLP1YOR250C BCK2P33306 851 aa9.5□□□□□ -0.89
CLP1YOR250C HAP5Q02516 242 aa9.48□□□□□ -0.89
CLP1YOR250C SPT23P35210 1082 aa9.47□□□□□ -0.89
CLP1YOR250C DMA1P38823 416 aa9.47□□□□□ -0.89
CLP1YOR250C REF2P42073 533 aaPredicted RBP9.47□□□□□ -0.89
CLP1YOR250C DPL1Q05567 589 aa9.47□□□□□ -0.89
CLP1YOR250C RAD54P32863 898 aa9.46□□□□□ -0.9
CLP1YOR250C PCS60P38137 543 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
CLP1YOR250C VPS70P47161 811 aa9.44□□□□□ -0.9
CLP1YOR250C BNI4P53858 892 aa9.44□□□□□ -0.9
CLP1YOR250C NMA111P53920 997 aa9.42□□□□□ -0.9
CLP1YOR250C YDR090CQ03193 310 aa9.42□□□□□ -0.9
CLP1YOR250C RPP1BP10622 106 aaKnown RBP9.4□□□□□ -0.9
CLP1YOR250C KIC1P38692 1080 aa9.39□□□□□ -0.91
CLP1YOR250C ISU2Q12056 156 aa9.39□□□□□ -0.91
CLP1YOR250C MAK21Q12176 1025 aaKnown RBP9.39□□□□□ -0.91
CLP1YOR250C CKB1P43639 278 aa9.38□□□□□ -0.91
CLP1YOR250C VRP1P37370 817 aa9.37□□□□□ -0.91
CLP1YOR250C YML082WQ04533 649 aaKnown RBP9.36□□□□□ -0.91
CLP1YOR250C CDC73Q06697 393 aa9.36□□□□□ -0.91
CLP1YOR250C SAS10Q12136 610 aaPredicted RBP9.36□□□□□ -0.91
CLP1YOR250C PTC2P39966 464 aaKnown RBP9.35□□□□□ -0.91
CLP1YOR250C XDJ1P39102 459 aa9.34□□□□□ -0.91
CLP1YOR250C COX6P00427 148 aa9.33□□□□□ -0.92
CLP1YOR250C GAP1P19145 602 aaPredicted RBP9.27□□□□□ -0.93
CLP1YOR250C CSC1Q06538 782 aa9.26□□□□□ -0.93
CLP1YOR250C RQC2Q12532 1038 aaKnown RBP9.26□□□□□ -0.93
CLP1YOR250C PBS2P08018 668 aa9.24□□□□□ -0.93
CLP1YOR250C RAM1P22007 431 aa9.24□□□□□ -0.93
CLP1YOR250C ORC6P38826 435 aa9.24□□□□□ -0.93
CLP1YOR250C TFB4Q12004 338 aa9.24□□□□□ -0.93
CLP1YOR250C PEX21P50091 288 aa9.21□□□□□ -0.94
CLP1YOR250C YPR015CQ12531 247 aa9.19□□□□□ -0.94
CLP1YOR250C PDR1P12383 1068 aa9.16□□□□□ -0.94
CLP1YOR250C DSF2P38213 736 aa9.16□□□□□ -0.94
CLP1YOR250C YRR1Q12172 810 aa9.15□□□□□ -0.94
CLP1YOR250C MVP1P40959 511 aaKnown RBP9.13□□□□□ -0.95
CLP1YOR250C MAM3Q12296 706 aa9.13□□□□□ -0.95
CLP1YOR250C TUM1Q08686 304 aaKnown RBP9.11□□□□□ -0.95
CLP1YOR250C RGR1P19263 1082 aa9.1□□□□□ -0.95
CLP1YOR250C SAS4Q04003 481 aa9.1□□□□□ -0.95
CLP1YOR250C PSE1P32337 1089 aaKnown RBP9.09□□□□□ -0.95
CLP1YOR250C DPS1P04802 557 aaKnown RBP9.08□□□□□ -0.96
CLP1YOR250C GYP1Q08484 637 aa9.07□□□□□ -0.96
CLP1YOR250C SPB4P25808 606 aaPredicted RBP9.06□□□□□ -0.96
CLP1YOR250C NUD1P32336 851 aa9.05□□□□□ -0.96
CLP1YOR250C YPR109WQ06104 294 aa9.05□□□□□ -0.96
CLP1YOR250C IES2P40154 320 aa9.04□□□□□ -0.96
CLP1YOR250C STR2P47164 639 aa9.04□□□□□ -0.96
CLP1YOR250C BUD20Q08004 166 aaPredicted RBP9.04□□□□□ -0.96
CLP1YOR250C CLB5P30283 435 aa9.02□□□□□ -0.97
CLP1YOR250C NPL4P33755 580 aa9.02□□□□□ -0.97
CLP1YOR250C ISM1P48526 1002 aa9.02□□□□□ -0.97
CLP1YOR250C NUP42P49686 430 aaKnown RBP9.02□□□□□ -0.97
CLP1YOR250C PRT1P06103 763 aaKnown RBP9.01□□□□□ -0.97
CLP1YOR250C MRF1P30775 413 aaPredicted RBP8.98□□□□□ -0.97
CLP1YOR250C SDH2P21801 266 aa8.93□□□□□ -0.98
CLP1YOR250C AMS1P22855 1083 aa8.93□□□□□ -0.98
CLP1YOR250C GCD11P32481 527 aaKnown RBP8.93□□□□□ -0.98
CLP1YOR250C DIT2P21595 489 aa8.92□□□□□ -0.98
CLP1YOR250C YEL077CQ3E7X8 1277 aa8.92□□□□□ -0.98
CLP1YOR250C TY1A-DR4O74302 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-HP0C2I4 478 aaKnown RBP8.91□□□□□ -0.98
CLP1YOR250C TY1A-AP0CX57 440 aa8.91□□□□□ -0.98
CLP1YOR250C TY1A-PR1P0CX58 440 aa8.91□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 128.5 ms