RNA–Protein interactions for RNA: YOR090C

PTC5, Transcript of Mitochondrial type 2C protein phosphatase (PP2C), yeast

Gene PTC5, Length 1,719 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC5	YOR090C	PTC3	P34221	468 aa	Known RBP	4.4	□□□□□ -1.71
PTC5	YOR090C	GRE2	Q12068	342 aa	Known RBP	4.39	□□□□□ -1.71
PTC5	YOR090C	HTA1	P04911	132 aa	Known RBP	4.38	□□□□□ -1.71
PTC5	YOR090C	HTA2	P04912	132 aa		4.38	□□□□□ -1.71
PTC5	YOR090C	ABP1	P15891	592 aa	Known RBP	4.38	□□□□□ -1.71
PTC5	YOR090C	YNL035C	P53962	389 aa	Known RBP	4.38	□□□□□ -1.71
PTC5	YOR090C	ATH1	P48016	1211 aa		4.37	□□□□□ -1.71
PTC5	YOR090C	GUT1	P32190	709 aa		4.35	□□□□□ -1.71
PTC5	YOR090C	YEL023C	P39992	682 aa		4.35	□□□□□ -1.71
PTC5	YOR090C	NCR1	Q12200	1170 aa		4.35	□□□□□ -1.71
PTC5	YOR090C	LEU3	P08638	886 aa		4.34	□□□□□ -1.71
PTC5	YOR090C	SEC61	P32915	480 aa		4.34	□□□□□ -1.71
PTC5	YOR090C	DAN4	P47179	1161 aa		4.34	□□□□□ -1.71
PTC5	YOR090C	JIP4	Q03361	876 aa		4.34	□□□□□ -1.71
PTC5	YOR090C	SET1	P38827	1080 aa	Known RBP	4.33	□□□□□ -1.72
PTC5	YOR090C	PTC4	P38089	393 aa		4.32	□□□□□ -1.72
PTC5	YOR090C	NOP53	Q12080	455 aa	Known RBP	4.32	□□□□□ -1.72
PTC5	YOR090C	SOL3	P38858	249 aa		4.31	□□□□□ -1.72
PTC5	YOR090C	TFG1	P41895	735 aa	Predicted RBP	4.3	□□□□□ -1.72
PTC5	YOR090C	NST1	P53935	1240 aa		4.29	□□□□□ -1.72
PTC5	YOR090C	SAP30	P38429	201 aa		4.28	□□□□□ -1.72
PTC5	YOR090C	YDL129W	Q07555	291 aa		4.27	□□□□□ -1.73
PTC5	YOR090C	ILV3	P39522	585 aa	Known RBP	4.26	□□□□□ -1.73
PTC5	YOR090C	YGR273C	P53329	174 aa		4.26	□□□□□ -1.73
PTC5	YOR090C	PML39	Q03760	334 aa		4.26	□□□□□ -1.73
PTC5	YOR090C	MPH3	P0CE00	602 aa		4.26	□□□□□ -1.73
PTC5	YOR090C	RGA1	P39083	1007 aa		4.25	□□□□□ -1.73
PTC5	YOR090C	AI4	P03878	556 aa		4.24	□□□□□ -1.73
PTC5	YOR090C	MID1	P41821	548 aa		4.24	□□□□□ -1.73
PTC5	YOR090C	VPS70	P47161	811 aa		4.22	□□□□□ -1.73
PTC5	YOR090C	YDR344C	Q05510	147 aa		4.22	□□□□□ -1.73
PTC5	YOR090C	YPR148C	Q06523	435 aa		4.21	□□□□□ -1.73
PTC5	YOR090C	SPB4	P25808	606 aa	Predicted RBP	4.21	□□□□□ -1.74
PTC5	YOR090C	IFH1	P39520	1085 aa		4.21	□□□□□ -1.74
PTC5	YOR090C	VHR2	P40041	505 aa		4.21	□□□□□ -1.74
PTC5	YOR090C	KEX1	P09620	729 aa		4.2	□□□□□ -1.74
PTC5	YOR090C	RPN1	P38764	993 aa	Known RBP	4.2	□□□□□ -1.74
PTC5	YOR090C	UBP14	P38237	781 aa	Known RBP	4.19	□□□□□ -1.74
PTC5	YOR090C	DMA2	P53924	522 aa		4.19	□□□□□ -1.74
PTC5	YOR090C	PEX29	Q03370	554 aa		4.19	□□□□□ -1.74
PTC5	YOR090C	YLR326W	Q06170	240 aa	Known RBP	4.19	□□□□□ -1.74
PTC5	YOR090C	SLI15	P38283	698 aa		4.18	□□□□□ -1.74
PTC5	YOR090C	PRE3	P38624	215 aa		4.18	□□□□□ -1.74
PTC5	YOR090C	CKB1	P43639	278 aa		4.18	□□□□□ -1.74
PTC5	YOR090C	CHL1	P22516	861 aa	Predicted RBP	4.18	□□□□□ -1.74
PTC5	YOR090C	ELP4	Q02884	456 aa	Known RBP	4.18	□□□□□ -1.74
PTC5	YOR090C	BCK2	P33306	851 aa		4.17	□□□□□ -1.74
PTC5	YOR090C	MPC54	Q08550	464 aa		4.16	□□□□□ -1.74
PTC5	YOR090C	RAD54	P32863	898 aa		4.15	□□□□□ -1.74
PTC5	YOR090C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
PTC5	YOR090C	ARH1	P48360	493 aa		4.15	□□□□□ -1.74
PTC5	YOR090C	REF2	P42073	533 aa	Predicted RBP	4.15	□□□□□ -1.75
PTC5	YOR090C	YDR090C	Q03193	310 aa		4.14	□□□□□ -1.75
PTC5	YOR090C	HAP5	Q02516	242 aa		4.13	□□□□□ -1.75
PTC5	YOR090C	DPL1	Q05567	589 aa		4.13	□□□□□ -1.75
PTC5	YOR090C	CDC73	Q06697	393 aa		4.13	□□□□□ -1.75
PTC5	YOR090C	DSF2	P38213	736 aa		4.12	□□□□□ -1.75
PTC5	YOR090C	NMA111	P53920	997 aa		4.12	□□□□□ -1.75
PTC5	YOR090C	PBS2	P08018	668 aa		4.12	□□□□□ -1.75
PTC5	YOR090C	KIC1	P38692	1080 aa		4.12	□□□□□ -1.75
PTC5	YOR090C	SPT23	P35210	1082 aa		4.11	□□□□□ -1.75
PTC5	YOR090C	VRP1	P37370	817 aa		4.09	□□□□□ -1.75
PTC5	YOR090C	BNI4	P53858	892 aa		4.09	□□□□□ -1.76
PTC5	YOR090C	ISU2	Q12056	156 aa		4.09	□□□□□ -1.76
PTC5	YOR090C	COX6	P00427	148 aa		4.08	□□□□□ -1.76
PTC5	YOR090C	PTC2	P39966	464 aa	Known RBP	4.07	□□□□□ -1.76
PTC5	YOR090C	RPP1B	P10622	106 aa	Known RBP	4.07	□□□□□ -1.76
PTC5	YOR090C	KIN1	P13185	1064 aa		4.07	□□□□□ -1.76
PTC5	YOR090C	DIT2	P21595	489 aa		4.07	□□□□□ -1.76
PTC5	YOR090C	XDJ1	P39102	459 aa		4.07	□□□□□ -1.76
PTC5	YOR090C	MAK21	Q12176	1025 aa	Known RBP	4.07	□□□□□ -1.76
PTC5	YOR090C	YNR021W	P53723	404 aa	Known RBP	4.06	□□□□□ -1.76
PTC5	YOR090C	PDR1	P12383	1068 aa		4.05	□□□□□ -1.76
PTC5	YOR090C	GLC3	P32775	704 aa		4.05	□□□□□ -1.76
PTC5	YOR090C	NUP42	P49686	430 aa	Known RBP	4.05	□□□□□ -1.76
PTC5	YOR090C	YML082W	Q04533	649 aa	Known RBP	4.05	□□□□□ -1.76
PTC5	YOR090C	MAM3	Q12296	706 aa		4.05	□□□□□ -1.76
PTC5	YOR090C	ORC6	P38826	435 aa		4.04	□□□□□ -1.76
PTC5	YOR090C	IES2	P40154	320 aa		4.04	□□□□□ -1.76
PTC5	YOR090C	GAP1	P19145	602 aa	Predicted RBP	4.04	□□□□□ -1.76
PTC5	YOR090C	RAM1	P22007	431 aa		4.04	□□□□□ -1.76
PTC5	YOR090C	PEX21	P50091	288 aa		4.04	□□□□□ -1.76
PTC5	YOR090C	YPR015C	Q12531	247 aa		4.04	□□□□□ -1.76
PTC5	YOR090C	YRR1	Q12172	810 aa		4.03	□□□□□ -1.76
PTC5	YOR090C	CSC1	Q06538	782 aa		4.02	□□□□□ -1.77
PTC5	YOR090C	TUM1	Q08686	304 aa	Known RBP	4.01	□□□□□ -1.77
PTC5	YOR090C	TFB4	Q12004	338 aa		4.01	□□□□□ -1.77
PTC5	YOR090C	RLF2	Q12495	606 aa		4.01	□□□□□ -1.77
PTC5	YOR090C	AIM7	Q12156	149 aa		4.01	□□□□□ -1.77
PTC5	YOR090C	GUA1	P38625	525 aa	Known RBP	4	□□□□□ -1.77
PTC5	YOR090C	MVP1	P40959	511 aa	Known RBP	4	□□□□□ -1.77
PTC5	YOR090C	RGR1	P19263	1082 aa		3.99	□□□□□ -1.77
PTC5	YOR090C	YPR109W	Q06104	294 aa		3.98	□□□□□ -1.77
PTC5	YOR090C	NUD1	P32336	851 aa		3.98	□□□□□ -1.77
PTC5	YOR090C	GYP1	Q08484	637 aa		3.98	□□□□□ -1.77
PTC5	YOR090C	DPS1	P04802	557 aa	Known RBP	3.97	□□□□□ -1.77
PTC5	YOR090C	STR2	P47164	639 aa		3.97	□□□□□ -1.77
PTC5	YOR090C	ISM1	P48526	1002 aa		3.97	□□□□□ -1.77
PTC5	YOR090C	PSE1	P32337	1089 aa	Known RBP	3.96	□□□□□ -1.78
PTC5	YOR090C	ATF2	P53296	535 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms