RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	ABP1	P15891	592 aa	Known RBP	6.04	□□□□□ -1.44
VAM10	YOR068C	UBP14	P38237	781 aa	Known RBP	6.04	□□□□□ -1.44
VAM10	YOR068C	NST1	P53935	1240 aa		6.04	□□□□□ -1.44
VAM10	YOR068C	YBL029C-A	Q3E756	94 aa		6.04	□□□□□ -1.44
VAM10	YOR068C	RPN1	P38764	993 aa	Known RBP	6.03	□□□□□ -1.44
VAM10	YOR068C	YDR090C	Q03193	310 aa		6.03	□□□□□ -1.44
VAM10	YOR068C	YLR326W	Q06170	240 aa	Known RBP	6.03	□□□□□ -1.44
VAM10	YOR068C	MAM3	Q12296	706 aa		6.03	□□□□□ -1.44
VAM10	YOR068C	IES2	P40154	320 aa		6.02	□□□□□ -1.45
VAM10	YOR068C	MAK21	Q12176	1025 aa	Known RBP	6.02	□□□□□ -1.45
VAM10	YOR068C	COX6	P00427	148 aa		6.01	□□□□□ -1.45
VAM10	YOR068C	HTA1	P04911	132 aa	Known RBP	6.01	□□□□□ -1.45
VAM10	YOR068C	HTA2	P04912	132 aa		6.01	□□□□□ -1.45
VAM10	YOR068C	VNX1	P42839	908 aa		6.01	□□□□□ -1.45
VAM10	YOR068C	KEX1	P09620	729 aa		5.99	□□□□□ -1.45
VAM10	YOR068C	ILV3	P39522	585 aa	Known RBP	5.99	□□□□□ -1.45
VAM10	YOR068C	NUP42	P49686	430 aa	Known RBP	5.99	□□□□□ -1.45
VAM10	YOR068C	TRP5	P00931	707 aa	Known RBP	5.97	□□□□□ -1.45
VAM10	YOR068C	DIT2	P21595	489 aa		5.97	□□□□□ -1.45
VAM10	YOR068C	YNR021W	P53723	404 aa	Known RBP	5.97	□□□□□ -1.45
VAM10	YOR068C	MPH3	P0CE00	602 aa		5.96	□□□□□ -1.46
VAM10	YOR068C	RAD54	P32863	898 aa		5.96	□□□□□ -1.46
VAM10	YOR068C	EAP1	P36041	632 aa	Known RBP	5.96	□□□□□ -1.46
VAM10	YOR068C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.96	□□□□□ -1.46	not detected
VAM10	YOR068C	TIF11	P38912	153 aa	Known RBP	5.96	□□□□□ -1.46
VAM10	YOR068C	UBP9	P39967	754 aa		5.96	□□□□□ -1.46
VAM10	YOR068C	YEL023C	P39992	682 aa		5.96	□□□□□ -1.46
VAM10	YOR068C	AI4	P03878	556 aa		5.95	□□□□□ -1.46
VAM10	YOR068C	GLC3	P32775	704 aa		5.95	□□□□□ -1.46
VAM10	YOR068C	KIC1	P38692	1080 aa		5.94	□□□□□ -1.46
VAM10	YOR068C	SPP1	Q03012	353 aa		5.94	□□□□□ -1.46
VAM10	YOR068C	ULI1	P43604	169 aa		5.93	□□□□□ -1.46
VAM10	YOR068C	IOC2	Q12072	812 aa		5.92	□□□□□ -1.46
VAM10	YOR068C	DAN4	P47179	1161 aa		5.91	□□□□□ -1.46
VAM10	YOR068C	PTC4	P38089	393 aa		5.9	□□□□□ -1.46
VAM10	YOR068C	AIM7	Q12156	149 aa		5.9	□□□□□ -1.46
VAM10	YOR068C	KIN1	P13185	1064 aa		5.89	□□□□□ -1.47
VAM10	YOR068C	ORC6	P38826	435 aa		5.89	□□□□□ -1.47
VAM10	YOR068C	JIP4	Q03361	876 aa		5.89	□□□□□ -1.47
VAM10	YOR068C	SLI15	P38283	698 aa		5.88	□□□□□ -1.47
VAM10	YOR068C	BUD31	P25337	157 aa	Predicted RBP	5.87	□□□□□ -1.47
VAM10	YOR068C	LDB19	Q12502	818 aa		5.87	□□□□□ -1.47
VAM10	YOR068C	PSE1	P32337	1089 aa	Known RBP	5.86	□□□□□ -1.47
VAM10	YOR068C	YNL035C	P53962	389 aa	Known RBP	5.86	□□□□□ -1.47
VAM10	YOR068C	ATF2	P53296	535 aa		5.84	□□□□□ -1.47
VAM10	YOR068C	GAP1	P19145	602 aa	Predicted RBP	5.83	□□□□□ -1.48
VAM10	YOR068C	RTG1	P32607	177 aa		5.83	□□□□□ -1.48
VAM10	YOR068C	DMA2	P53924	522 aa		5.83	□□□□□ -1.48
VAM10	YOR068C	MID1	P41821	548 aa		5.82	□□□□□ -1.48
VAM10	YOR068C	PML39	Q03760	334 aa		5.82	□□□□□ -1.48
VAM10	YOR068C	CDC73	Q06697	393 aa		5.82	□□□□□ -1.48
VAM10	YOR068C	RGR1	P19263	1082 aa		5.81	□□□□□ -1.48
VAM10	YOR068C	SEC61	P32915	480 aa		5.81	□□□□□ -1.48
VAM10	YOR068C	MVP1	P40959	511 aa	Known RBP	5.79	□□□□□ -1.48
VAM10	YOR068C	FKH1	P40466	484 aa		5.78	□□□□□ -1.48
VAM10	YOR068C	CSC1	Q06538	782 aa		5.78	□□□□□ -1.48
VAM10	YOR068C	MPC54	Q08550	464 aa		5.78	□□□□□ -1.48
VAM10	YOR068C	RPP1B	P10622	106 aa	Known RBP	5.77	□□□□□ -1.49
VAM10	YOR068C	GUA1	P38625	525 aa	Known RBP	5.77	□□□□□ -1.49
VAM10	YOR068C	DPL1	Q05567	589 aa		5.77	□□□□□ -1.49
VAM10	YOR068C	TEA1	P47988	759 aa		5.76	□□□□□ -1.49
VAM10	YOR068C	NCR1	Q12200	1170 aa		5.76	□□□□□ -1.49
VAM10	YOR068C	YDL129W	Q07555	291 aa		5.75	□□□□□ -1.49
VAM10	YOR068C	TFB4	Q12004	338 aa		5.75	□□□□□ -1.49
VAM10	YOR068C	CLB5	P30283	435 aa		5.74	□□□□□ -1.49
VAM10	YOR068C	PEX29	Q03370	554 aa		5.74	□□□□□ -1.49
VAM10	YOR068C	YPR109W	Q06104	294 aa		5.74	□□□□□ -1.49
VAM10	YOR068C	TFG1	P41895	735 aa	Predicted RBP	5.73	□□□□□ -1.49
VAM10	YOR068C	PEX21	P50091	288 aa		5.72	□□□□□ -1.49
VAM10	YOR068C	AIR2	Q12476	344 aa	Known RBP	5.72	□□□□□ -1.49
VAM10	YOR068C	NMA111	P53920	997 aa		5.71	□□□□□ -1.5
VAM10	YOR068C	NIS1	P53939	407 aa		5.71	□□□□□ -1.5
VAM10	YOR068C	HPC2	Q01448	625 aa		5.71	□□□□□ -1.5
VAM10	YOR068C	YDR344C	Q05510	147 aa		5.71	□□□□□ -1.5
VAM10	YOR068C	TUM1	Q08686	304 aa	Known RBP	5.71	□□□□□ -1.5
VAM10	YOR068C	KTR1	P27810	393 aa	Known RBP	5.7	□□□□□ -1.5
VAM10	YOR068C	SAP30	P38429	201 aa		5.7	□□□□□ -1.5
VAM10	YOR068C	CSN12	P47130	423 aa		5.7	□□□□□ -1.5
VAM10	YOR068C	ISU2	Q12056	156 aa		5.7	□□□□□ -1.5
VAM10	YOR068C	YRR1	Q12172	810 aa		5.69	□□□□□ -1.5
VAM10	YOR068C	FPK1	P53739	893 aa		5.68	□□□□□ -1.5
VAM10	YOR068C	TYW1	Q08960	810 aa	Known RBP	5.68	□□□□□ -1.5
VAM10	YOR068C	TFB3	Q03290	321 aa		5.67	□□□□□ -1.5
VAM10	YOR068C	SSA2	P10592	639 aa	Known RBP	5.66	□□□□□ -1.5
VAM10	YOR068C	SIT4	P20604	311 aa		5.66	□□□□□ -1.5
VAM10	YOR068C	ARH1	P48360	493 aa		5.66	□□□□□ -1.5
VAM10	YOR068C	HST2	P53686	357 aa		5.66	□□□□□ -1.5
VAM10	YOR068C	HAP5	Q02516	242 aa		5.66	□□□□□ -1.5
VAM10	YOR068C	YMR196W	Q04336	1088 aa		5.66	□□□□□ -1.5
VAM10	YOR068C	PDR1	P12383	1068 aa		5.65	□□□□□ -1.5
VAM10	YOR068C	SIS1	P25294	352 aa	Known RBP	5.64	□□□□□ -1.51
VAM10	YOR068C	SCJ1	P25303	377 aa		5.64	□□□□□ -1.51
VAM10	YOR068C	GLN1	P32288	370 aa	Known RBP	5.64	□□□□□ -1.51
VAM10	YOR068C	ESS1	P22696	170 aa		5.63	□□□□□ -1.51
VAM10	YOR068C	PKC1	P24583	1151 aa		5.63	□□□□□ -1.51
VAM10	YOR068C	NUD1	P32336	851 aa		5.63	□□□□□ -1.51
VAM10	YOR068C	HGH1	P48362	394 aa	Known RBP	5.63	□□□□□ -1.51
VAM10	YOR068C	BRL1	P38770	471 aa		5.62	□□□□□ -1.51
VAM10	YOR068C	MMP1	Q12372	583 aa		5.62	□□□□□ -1.51
VAM10	YOR068C	STR2	P47164	639 aa		5.61	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms