RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W BMT6Q12291 365 aa10.2□□□□□ -0.78
SSU72YNL222W SEC61P32915 480 aa10.19□□□□□ -0.78
SSU72YNL222W NCR1Q12200 1170 aa10.19□□□□□ -0.78
SSU72YNL222W GRE2Q12068 342 aaKnown RBP10.18□□□□□ -0.78
SSU72YNL222W JIP4Q03361 876 aa10.16□□□□□ -0.78
SSU72YNL222W ATH1P48016 1211 aa10.15□□□□□ -0.78
SSU72YNL222W TFG1P41895 735 aaPredicted RBP10.13□□□□□ -0.79
SSU72YNL222W NOP53Q12080 455 aaKnown RBP10.12□□□□□ -0.79
SSU72YNL222W YEL023CP39992 682 aa10.11□□□□□ -0.79
SSU72YNL222W RQC2Q12532 1038 aaKnown RBP10.11□□□□□ -0.79
SSU72YNL222W GUT1P32190 709 aa10.1□□□□□ -0.79
SSU72YNL222W DAN4P47179 1161 aa10.1□□□□□ -0.79
SSU72YNL222W PTC4P38089 393 aa10.09□□□□□ -0.79
SSU72YNL222W YDL129WQ07555 291 aa10□□□□□ -0.81
SSU72YNL222W SAP30P38429 201 aa9.99□□□□□ -0.81
SSU72YNL222W SOL3P38858 249 aa9.99□□□□□ -0.81
SSU72YNL222W YPR148CQ06523 435 aa9.97□□□□□ -0.81
SSU72YNL222W IFH1P39520 1085 aa9.96□□□□□ -0.82
SSU72YNL222W NST1P53935 1240 aa9.96□□□□□ -0.82
SSU72YNL222W VPS70P47161 811 aa9.93□□□□□ -0.82
SSU72YNL222W YGR273CP53329 174 aa9.93□□□□□ -0.82
SSU72YNL222W PML39Q03760 334 aa9.9□□□□□ -0.82
SSU72YNL222W ILV3P39522 585 aaKnown RBP9.88□□□□□ -0.83
SSU72YNL222W MPH3P0CE00 602 aa9.87□□□□□ -0.83
SSU72YNL222W SAS10Q12136 610 aaPredicted RBP9.87□□□□□ -0.83
SSU72YNL222W AI4P03878 556 aa9.86□□□□□ -0.83
SSU72YNL222W VHR2P40041 505 aa9.84□□□□□ -0.83
SSU72YNL222W CHL1P22516 861 aaPredicted RBP9.83□□□□□ -0.84
SSU72YNL222W PRE3P38624 215 aa9.82□□□□□ -0.84
SSU72YNL222W KEX1P09620 729 aa9.8□□□□□ -0.84
SSU72YNL222W YLR326WQ06170 240 aaKnown RBP9.8□□□□□ -0.84
SSU72YNL222W UBP14P38237 781 aaKnown RBP9.79□□□□□ -0.84
SSU72YNL222W MID1P41821 548 aa9.78□□□□□ -0.84
SSU72YNL222W REF2P42073 533 aaPredicted RBP9.78□□□□□ -0.84
SSU72YNL222W ELP4Q02884 456 aaKnown RBP9.75□□□□□ -0.85
SSU72YNL222W PEX29Q03370 554 aa9.75□□□□□ -0.85
SSU72YNL222W CKB1P43639 278 aa9.73□□□□□ -0.85
SSU72YNL222W SLI15P38283 698 aa9.72□□□□□ -0.85
SSU72YNL222W RAD54P32863 898 aa9.71□□□□□ -0.86
SSU72YNL222W PCS60P38137 543 aaKnown RBP RIP-Chip data9.71□□□□□ -0.86not detected
SSU72YNL222W ARH1P48360 493 aa9.71□□□□□ -0.86
SSU72YNL222W YDR090CQ03193 310 aa9.71□□□□□ -0.86
SSU72YNL222W YDR344CQ05510 147 aa9.71□□□□□ -0.86
SSU72YNL222W BCK2P33306 851 aa9.7□□□□□ -0.86
SSU72YNL222W PBS2P08018 668 aa9.66□□□□□ -0.86
SSU72YNL222W KIC1P38692 1080 aa9.66□□□□□ -0.86
SSU72YNL222W MPC54Q08550 464 aa9.63□□□□□ -0.87
SSU72YNL222W HAP5Q02516 242 aa9.62□□□□□ -0.87
SSU72YNL222W MAK21Q12176 1025 aaKnown RBP9.62□□□□□ -0.87
SSU72YNL222W COX6P00427 148 aa9.61□□□□□ -0.87
SSU72YNL222W SPT23P35210 1082 aa9.61□□□□□ -0.87
SSU72YNL222W CDC73Q06697 393 aa9.6□□□□□ -0.87
SSU72YNL222W SPB4P25808 606 aaPredicted RBP9.59□□□□□ -0.87
SSU72YNL222W VRP1P37370 817 aa9.59□□□□□ -0.87
SSU72YNL222W DPL1Q05567 589 aa9.57□□□□□ -0.88
SSU72YNL222W DSF2P38213 736 aa9.56□□□□□ -0.88
SSU72YNL222W BNI4P53858 892 aa9.55□□□□□ -0.88
SSU72YNL222W NMA111P53920 997 aa9.55□□□□□ -0.88
SSU72YNL222W MAM3Q12296 706 aa9.54□□□□□ -0.88
SSU72YNL222W XDJ1P39102 459 aa9.51□□□□□ -0.89
SSU72YNL222W RPP1BP10622 106 aaKnown RBP9.5□□□□□ -0.89
SSU72YNL222W ORC6P38826 435 aa9.5□□□□□ -0.89
SSU72YNL222W PTC2P39966 464 aaKnown RBP9.5□□□□□ -0.89
SSU72YNL222W IES2P40154 320 aa9.5□□□□□ -0.89
SSU72YNL222W ISU2Q12056 156 aa9.48□□□□□ -0.89
SSU72YNL222W YML082WQ04533 649 aaKnown RBP9.47□□□□□ -0.89
SSU72YNL222W GAP1P19145 602 aaPredicted RBP9.44□□□□□ -0.9
SSU72YNL222W PEX21P50091 288 aa9.42□□□□□ -0.9
SSU72YNL222W CSC1Q06538 782 aa9.42□□□□□ -0.9
SSU72YNL222W NUP42P49686 430 aaKnown RBP9.41□□□□□ -0.9
SSU72YNL222W PDR1P12383 1068 aa9.38□□□□□ -0.91
SSU72YNL222W DIT2P21595 489 aa9.38□□□□□ -0.91
SSU72YNL222W MVP1P40959 511 aaKnown RBP9.38□□□□□ -0.91
SSU72YNL222W TFB4Q12004 338 aa9.38□□□□□ -0.91
SSU72YNL222W YRR1Q12172 810 aa9.37□□□□□ -0.91
SSU72YNL222W RGR1P19263 1082 aa9.36□□□□□ -0.91
SSU72YNL222W TUM1Q08686 304 aaKnown RBP9.36□□□□□ -0.91
SSU72YNL222W PSE1P32337 1089 aaKnown RBP9.35□□□□□ -0.91
SSU72YNL222W RAM1P22007 431 aa9.33□□□□□ -0.92
SSU72YNL222W YPR109WQ06104 294 aa9.32□□□□□ -0.92
SSU72YNL222W YPR015CQ12531 247 aa9.32□□□□□ -0.92
SSU72YNL222W DPS1P04802 557 aaKnown RBP9.3□□□□□ -0.92
SSU72YNL222W LEU3P08638 886 aa9.3□□□□□ -0.92
SSU72YNL222W NUD1P32336 851 aa9.26□□□□□ -0.93
SSU72YNL222W GLC3P32775 704 aa9.25□□□□□ -0.93
SSU72YNL222W YNR021WP53723 404 aaKnown RBP9.25□□□□□ -0.93
SSU72YNL222W GYP1Q08484 637 aa9.25□□□□□ -0.93
SSU72YNL222W STR2P47164 639 aa9.22□□□□□ -0.93
SSU72YNL222W CLB5P30283 435 aa9.21□□□□□ -0.94
SSU72YNL222W TEA1P47988 759 aa9.21□□□□□ -0.94
SSU72YNL222W ISM1P48526 1002 aa9.21□□□□□ -0.94
SSU72YNL222W ATF2P53296 535 aa9.19□□□□□ -0.94
SSU72YNL222W SAS4Q04003 481 aa9.19□□□□□ -0.94
SSU72YNL222W NPL4P33755 580 aa9.18□□□□□ -0.94
SSU72YNL222W BUD20Q08004 166 aaPredicted RBP9.18□□□□□ -0.94
SSU72YNL222W KEX2P13134 814 aa9.13□□□□□ -0.95
SSU72YNL222W NIS1P53939 407 aa9.13□□□□□ -0.95
SSU72YNL222W TY1A-DR4O74302 440 aa9.12□□□□□ -0.95
SSU72YNL222W PRT1P06103 763 aaKnown RBP9.12□□□□□ -0.95
SSU72YNL222W TY1A-HP0C2I4 478 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms