RNA–Protein interactions for RNA: YMR094W

CTF13, Transcript of Subunit of the CBF3 complex, yeastyeast

Gene CTF13, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF13YMR094W BMT6Q12291 365 aa9.17□□□□□ -0.94
CTF13YMR094W PTC3P34221 468 aaKnown RBP9.15□□□□□ -0.94
CTF13YMR094W JIP4Q03361 876 aa9.15□□□□□ -0.94
CTF13YMR094W DAN4P47179 1161 aa9.13□□□□□ -0.95
CTF13YMR094W YEL023CP39992 682 aa9.12□□□□□ -0.95
CTF13YMR094W ATH1P48016 1211 aa9.12□□□□□ -0.95
CTF13YMR094W PTC4P38089 393 aa9.11□□□□□ -0.95
CTF13YMR094W TFG1P41895 735 aaPredicted RBP9.11□□□□□ -0.95
CTF13YMR094W GUT1P32190 709 aa9.09□□□□□ -0.95
CTF13YMR094W NOP53Q12080 455 aaKnown RBP9.04□□□□□ -0.96
CTF13YMR094W SAP30P38429 201 aa9.01□□□□□ -0.97
CTF13YMR094W YDL129WQ07555 291 aa9.01□□□□□ -0.97
CTF13YMR094W SOL3P38858 249 aa8.97□□□□□ -0.97
CTF13YMR094W NST1P53935 1240 aa8.97□□□□□ -0.97
CTF13YMR094W SET1P38827 1080 aaKnown RBP8.95□□□□□ -0.98
CTF13YMR094W PML39Q03760 334 aa8.94□□□□□ -0.98
CTF13YMR094W MPH3P0CE00 602 aa8.89□□□□□ -0.99
CTF13YMR094W YGR273CP53329 174 aa8.89□□□□□ -0.99
CTF13YMR094W AI4P03878 556 aa8.88□□□□□ -0.99
CTF13YMR094W CHL1P22516 861 aaPredicted RBP8.86□□□□□ -0.99
CTF13YMR094W PRE3P38624 215 aa8.85□□□□□ -0.99
CTF13YMR094W MID1P41821 548 aa8.85□□□□□ -0.99
CTF13YMR094W ILV3P39522 585 aaKnown RBP8.83□□□□□ -1
CTF13YMR094W YDR344CQ05510 147 aa8.8□□□□□ -1
CTF13YMR094W ELP4Q02884 456 aaKnown RBP8.79□□□□□ -1
CTF13YMR094W PEX29Q03370 554 aa8.77□□□□□ -1.01
CTF13YMR094W ARH1P48360 493 aa8.75□□□□□ -1.01
CTF13YMR094W IFH1P39520 1085 aa8.74□□□□□ -1.01
CTF13YMR094W KEX1P09620 729 aa8.73□□□□□ -1.01
CTF13YMR094W BCK2P33306 851 aa8.73□□□□□ -1.01
CTF13YMR094W SLI15P38283 698 aa8.72□□□□□ -1.01
CTF13YMR094W UBP14P38237 781 aaKnown RBP8.7□□□□□ -1.02
CTF13YMR094W VHR2P40041 505 aa8.7□□□□□ -1.02
CTF13YMR094W MPC54Q08550 464 aa8.7□□□□□ -1.02
CTF13YMR094W YLR326WQ06170 240 aaKnown RBP8.69□□□□□ -1.02
CTF13YMR094W HAP5Q02516 242 aa8.67□□□□□ -1.02
CTF13YMR094W SPT23P35210 1082 aa8.65□□□□□ -1.02
CTF13YMR094W VRP1P37370 817 aa8.65□□□□□ -1.02
CTF13YMR094W DPL1Q05567 589 aa8.65□□□□□ -1.02
CTF13YMR094W YPR148CQ06523 435 aa8.65□□□□□ -1.02
CTF13YMR094W NMA111P53920 997 aa8.64□□□□□ -1.03
CTF13YMR094W PCS60P38137 543 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
CTF13YMR094W RAD54P32863 898 aa8.62□□□□□ -1.03
CTF13YMR094W VPS70P47161 811 aa8.61□□□□□ -1.03
CTF13YMR094W BNI4P53858 892 aa8.6□□□□□ -1.03
CTF13YMR094W REF2P42073 533 aaPredicted RBP8.59□□□□□ -1.03
CTF13YMR094W CDC73Q06697 393 aa8.59□□□□□ -1.03
CTF13YMR094W DMA1P38823 416 aa8.57□□□□□ -1.04
CTF13YMR094W YDR090CQ03193 310 aa8.57□□□□□ -1.04
CTF13YMR094W XDJ1P39102 459 aa8.56□□□□□ -1.04
CTF13YMR094W PTC2P39966 464 aaKnown RBP8.56□□□□□ -1.04
CTF13YMR094W ISU2Q12056 156 aa8.55□□□□□ -1.04
CTF13YMR094W KIC1P38692 1080 aa8.54□□□□□ -1.04
CTF13YMR094W YML082WQ04533 649 aaKnown RBP8.54□□□□□ -1.04
CTF13YMR094W RPP1BP10622 106 aaKnown RBP8.52□□□□□ -1.05
CTF13YMR094W COX6P00427 148 aa8.46□□□□□ -1.06
CTF13YMR094W MAK21Q12176 1025 aaKnown RBP8.46□□□□□ -1.06
CTF13YMR094W CKB1P43639 278 aa8.44□□□□□ -1.06
CTF13YMR094W PDR1P12383 1068 aa8.43□□□□□ -1.06
CTF13YMR094W RAM1P22007 431 aa8.43□□□□□ -1.06
CTF13YMR094W YPR015CQ12531 247 aa8.43□□□□□ -1.06
CTF13YMR094W PEX21P50091 288 aa8.41□□□□□ -1.06
CTF13YMR094W GAP1P19145 602 aaPredicted RBP8.39□□□□□ -1.07
CTF13YMR094W CSC1Q06538 782 aa8.39□□□□□ -1.07
CTF13YMR094W SAS10Q12136 610 aaPredicted RBP8.39□□□□□ -1.07
CTF13YMR094W ORC6P38826 435 aa8.38□□□□□ -1.07
CTF13YMR094W YRR1Q12172 810 aa8.38□□□□□ -1.07
CTF13YMR094W PBS2P08018 668 aa8.37□□□□□ -1.07
CTF13YMR094W DPS1P04802 557 aaKnown RBP8.37□□□□□ -1.07
CTF13YMR094W TFB4Q12004 338 aa8.37□□□□□ -1.07
CTF13YMR094W TUM1Q08686 304 aaKnown RBP8.35□□□□□ -1.07
CTF13YMR094W GYP1Q08484 637 aa8.33□□□□□ -1.08
CTF13YMR094W MVP1P40959 511 aaKnown RBP8.31□□□□□ -1.08
CTF13YMR094W RGR1P19263 1082 aa8.28□□□□□ -1.08
CTF13YMR094W SAS4Q04003 481 aa8.28□□□□□ -1.08
CTF13YMR094W BUD20Q08004 166 aaPredicted RBP8.28□□□□□ -1.08
CTF13YMR094W MAM3Q12296 706 aa8.27□□□□□ -1.09
CTF13YMR094W NUD1P32336 851 aa8.26□□□□□ -1.09
CTF13YMR094W STR2P47164 639 aa8.26□□□□□ -1.09
CTF13YMR094W DSF2P38213 736 aa8.25□□□□□ -1.09
CTF13YMR094W ISM1P48526 1002 aa8.25□□□□□ -1.09
CTF13YMR094W YPR109WQ06104 294 aa8.25□□□□□ -1.09
CTF13YMR094W SPB4P25808 606 aaPredicted RBP8.24□□□□□ -1.09
CTF13YMR094W PRT1P06103 763 aaKnown RBP8.23□□□□□ -1.09
CTF13YMR094W NPL4P33755 580 aa8.23□□□□□ -1.09
CTF13YMR094W PSE1P32337 1089 aaKnown RBP8.21□□□□□ -1.09
CTF13YMR094W RAS1P01119 309 aa8.2□□□□□ -1.1
CTF13YMR094W IES2P40154 320 aa8.2□□□□□ -1.1
CTF13YMR094W GCD11P32481 527 aaKnown RBP8.19□□□□□ -1.1
CTF13YMR094W SDH2P21801 266 aa8.18□□□□□ -1.1
CTF13YMR094W AMS1P22855 1083 aa8.16□□□□□ -1.1
CTF13YMR094W MRF1P30775 413 aaPredicted RBP8.16□□□□□ -1.1
CTF13YMR094W RQC2Q12532 1038 aaKnown RBP8.16□□□□□ -1.1
CTF13YMR094W NUP42P49686 430 aaKnown RBP8.15□□□□□ -1.1
CTF13YMR094W TY1A-DR4O74302 440 aa8.14□□□□□ -1.11
CTF13YMR094W TY1A-HP0C2I4 478 aaKnown RBP8.14□□□□□ -1.11
CTF13YMR094W TY1A-AP0CX57 440 aa8.14□□□□□ -1.11
CTF13YMR094W TY1A-PR1P0CX58 440 aa8.14□□□□□ -1.11
CTF13YMR094W TY1A-ORP0CX59 440 aa8.14□□□□□ -1.11
CTF13YMR094W TY1A-PR2P0CX60 440 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms