RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C GTT3P39996 337 aa9.61□□□□□ -0.87
CTF18YMR078C YNR021WP53723 404 aaKnown RBP9.61□□□□□ -0.87
CTF18YMR078C MAK21Q12176 1025 aaKnown RBP9.61□□□□□ -0.87
CTF18YMR078C DIT2P21595 489 aa9.6□□□□□ -0.87
CTF18YMR078C YLR326WQ06170 240 aaKnown RBP9.6□□□□□ -0.87
CTF18YMR078C YGR273CP53329 174 aa9.6□□□□□ -0.87
CTF18YMR078C YOL036WQ08206 761 aa9.6□□□□□ -0.87
CTF18YMR078C NST1P53935 1240 aa9.59□□□□□ -0.87
CTF18YMR078C SET4P42948 560 aa9.56□□□□□ -0.88
CTF18YMR078C GLC3P32775 704 aa9.55□□□□□ -0.88
CTF18YMR078C DCW1P36091 449 aa9.54□□□□□ -0.88
CTF18YMR078C DMA2P53924 522 aa9.54□□□□□ -0.88
CTF18YMR078C KEX1P09620 729 aa9.52□□□□□ -0.89
CTF18YMR078C KIN1P13185 1064 aa9.51□□□□□ -0.89
CTF18YMR078C PCS60P38137 543 aaKnown RBP RIP-Chip data9.51□□□□□ -0.89not detected
CTF18YMR078C ABP1P15891 592 aaKnown RBP9.5□□□□□ -0.89
CTF18YMR078C AIM7Q12156 149 aa9.5□□□□□ -0.89
CTF18YMR078C MSB4Q12317 492 aa9.48□□□□□ -0.89
CTF18YMR078C ILV3P39522 585 aaKnown RBP9.48□□□□□ -0.89
CTF18YMR078C WSC3Q12215 556 aa9.47□□□□□ -0.89
CTF18YMR078C HTA1P04911 132 aaKnown RBP9.47□□□□□ -0.89
CTF18YMR078C HTA2P04912 132 aa9.47□□□□□ -0.89
CTF18YMR078C RAD54P32863 898 aa9.45□□□□□ -0.9
CTF18YMR078C YBL029C-AQ3E756 94 aa9.43□□□□□ -0.9
CTF18YMR078C MPH3P0CE00 602 aa9.42□□□□□ -0.9
CTF18YMR078C KIC1P38692 1080 aa9.42□□□□□ -0.9
CTF18YMR078C AI4P03878 556 aa9.41□□□□□ -0.9
CTF18YMR078C VNX1P42839 908 aa9.4□□□□□ -0.91
CTF18YMR078C YEL023CP39992 682 aa9.39□□□□□ -0.91
CTF18YMR078C ORC6P38826 435 aa9.38□□□□□ -0.91
CTF18YMR078C TRP5P00931 707 aaKnown RBP9.37□□□□□ -0.91
CTF18YMR078C ATF2P53296 535 aa9.36□□□□□ -0.91
CTF18YMR078C PSE1P32337 1089 aaKnown RBP9.36□□□□□ -0.91
CTF18YMR078C GUA1P38625 525 aaKnown RBP9.35□□□□□ -0.91
CTF18YMR078C DAN4P47179 1161 aa9.35□□□□□ -0.91
CTF18YMR078C EAP1P36041 632 aaKnown RBP9.34□□□□□ -0.91
CTF18YMR078C SLI15P38283 698 aa9.33□□□□□ -0.92
CTF18YMR078C PTC4P38089 393 aa9.32□□□□□ -0.92
CTF18YMR078C TIF11P38912 153 aaKnown RBP9.31□□□□□ -0.92
CTF18YMR078C GAP1P19145 602 aaPredicted RBP9.29□□□□□ -0.92
CTF18YMR078C ULI1P43604 169 aa9.29□□□□□ -0.92
CTF18YMR078C IOC2Q12072 812 aa9.29□□□□□ -0.92
CTF18YMR078C RGR1P19263 1082 aa9.28□□□□□ -0.92
CTF18YMR078C SPP1Q03012 353 aa9.27□□□□□ -0.93
CTF18YMR078C JIP4Q03361 876 aa9.26□□□□□ -0.93
CTF18YMR078C MVP1P40959 511 aaKnown RBP9.25□□□□□ -0.93
CTF18YMR078C CDC73Q06697 393 aa9.24□□□□□ -0.93
CTF18YMR078C UBP9P39967 754 aa9.23□□□□□ -0.93
CTF18YMR078C TEA1P47988 759 aa9.2□□□□□ -0.94
CTF18YMR078C HPC2Q01448 625 aa9.2□□□□□ -0.94
CTF18YMR078C MID1P41821 548 aa9.2□□□□□ -0.94
CTF18YMR078C YNL035CP53962 389 aaKnown RBP9.19□□□□□ -0.94
CTF18YMR078C CSC1Q06538 782 aa9.18□□□□□ -0.94
CTF18YMR078C KTR1P27810 393 aaKnown RBP9.17□□□□□ -0.94
CTF18YMR078C LDB19Q12502 818 aa9.17□□□□□ -0.94
CTF18YMR078C PML39Q03760 334 aa9.17□□□□□ -0.94
CTF18YMR078C TFB3Q03290 321 aa9.16□□□□□ -0.94
CTF18YMR078C CSN12P47130 423 aa9.16□□□□□ -0.94
CTF18YMR078C NIS1P53939 407 aa9.15□□□□□ -0.95
CTF18YMR078C YPR109WQ06104 294 aa9.15□□□□□ -0.95
CTF18YMR078C RTG1P32607 177 aa9.14□□□□□ -0.95
CTF18YMR078C MPC54Q08550 464 aa9.14□□□□□ -0.95
CTF18YMR078C RLF2Q12495 606 aa9.13□□□□□ -0.95
CTF18YMR078C CLB5P30283 435 aa9.13□□□□□ -0.95
CTF18YMR078C TYW1Q08960 810 aaKnown RBP9.12□□□□□ -0.95
CTF18YMR078C TFB4Q12004 338 aa9.12□□□□□ -0.95
CTF18YMR078C RPP1BP10622 106 aaKnown RBP9.11□□□□□ -0.95
CTF18YMR078C PKC1P24583 1151 aa9.11□□□□□ -0.95
CTF18YMR078C SEC61P32915 480 aa9.11□□□□□ -0.95
CTF18YMR078C DPL1Q05567 589 aa9.11□□□□□ -0.95
CTF18YMR078C SSA2P10592 639 aaKnown RBP9.09□□□□□ -0.95
CTF18YMR078C FPK1P53739 893 aa9.09□□□□□ -0.95
CTF18YMR078C HGH1P48362 394 aaKnown RBP9.09□□□□□ -0.95
CTF18YMR078C TUM1Q08686 304 aaKnown RBP9.09□□□□□ -0.95
CTF18YMR078C PEX29Q03370 554 aa9.07□□□□□ -0.96
CTF18YMR078C HST2P53686 357 aa9.06□□□□□ -0.96
CTF18YMR078C BUD31P25337 157 aaPredicted RBP9.05□□□□□ -0.96
CTF18YMR078C SIT4P20604 311 aa9.05□□□□□ -0.96
CTF18YMR078C BRL1P38770 471 aa9.05□□□□□ -0.96
CTF18YMR078C PEX21P50091 288 aa9.05□□□□□ -0.96
CTF18YMR078C SCJ1P25303 377 aa9.04□□□□□ -0.96
CTF18YMR078C NMA111P53920 997 aa9.03□□□□□ -0.96
CTF18YMR078C YRR1Q12172 810 aa9.03□□□□□ -0.96
CTF18YMR078C NCR1Q12200 1170 aa9.03□□□□□ -0.96
CTF18YMR078C ISU2Q12056 156 aa9.02□□□□□ -0.97
CTF18YMR078C GLN1P32288 370 aaKnown RBP9.01□□□□□ -0.97
CTF18YMR078C YMR196WQ04336 1088 aa9.01□□□□□ -0.97
CTF18YMR078C YDR344CQ05510 147 aa9.01□□□□□ -0.97
CTF18YMR078C YDL129WQ07555 291 aa9.01□□□□□ -0.97
CTF18YMR078C FKH1P40466 484 aa9□□□□□ -0.97
CTF18YMR078C ESS1P22696 170 aa9□□□□□ -0.97
CTF18YMR078C MMP1Q12372 583 aa9□□□□□ -0.97
CTF18YMR078C YJU3P28321 313 aa8.97□□□□□ -0.97
CTF18YMR078C PKH3Q03306 898 aaPredicted RBP8.96□□□□□ -0.98
CTF18YMR078C BIM1P40013 344 aa8.95□□□□□ -0.98
CTF18YMR078C TFG1P41895 735 aaPredicted RBP8.95□□□□□ -0.98
CTF18YMR078C PDR1P12383 1068 aa8.95□□□□□ -0.98
CTF18YMR078C RAD59Q12223 238 aa8.95□□□□□ -0.98
CTF18YMR078C YJL007CP47080 104 aa8.94□□□□□ -0.98
CTF18YMR078C ATG32P40458 529 aa8.93□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms