RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W VMA1P17255 1071 aaKnown RBP7.88□□□□□ -1.15
YML040WYML040W YDR090CQ03193 310 aa7.88□□□□□ -1.15
YML040WYML040W UBP14P38237 781 aaKnown RBP7.87□□□□□ -1.15
YML040WYML040W PIB1Q06651 286 aa7.86□□□□□ -1.15
YML040WYML040W SAM3Q08986 587 aa7.83□□□□□ -1.16
YML040WYML040W GUA1P38625 525 aaKnown RBP7.82□□□□□ -1.16
YML040WYML040W VHR2P40041 505 aa7.82□□□□□ -1.16
YML040WYML040W YLR326WQ06170 240 aaKnown RBP7.82□□□□□ -1.16
YML040WYML040W GUT1P32190 709 aa7.81□□□□□ -1.16
YML040WYML040W GRE2Q12068 342 aaKnown RBP7.8□□□□□ -1.16
YML040WYML040W ATH1P48016 1211 aa7.79□□□□□ -1.16
YML040WYML040W YGR273CP53329 174 aa7.79□□□□□ -1.16
YML040WYML040W SOL3P38858 249 aa7.78□□□□□ -1.16
YML040WYML040W MST1P07236 462 aa7.78□□□□□ -1.16
YML040WYML040W ATF2P53296 535 aa7.78□□□□□ -1.16
YML040WYML040W HPC2Q01448 625 aa7.76□□□□□ -1.17
YML040WYML040W NST1P53935 1240 aa7.75□□□□□ -1.17
YML040WYML040W KEX1P09620 729 aa7.73□□□□□ -1.17
YML040WYML040W PCS60P38137 543 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
YML040WYML040W HGH1P48362 394 aaKnown RBP7.73□□□□□ -1.17
YML040WYML040W PSE1P32337 1089 aaKnown RBP7.72□□□□□ -1.17
YML040WYML040W GYP5Q12344 894 aa7.72□□□□□ -1.17
YML040WYML040W RAD54P32863 898 aa7.71□□□□□ -1.18
YML040WYML040W ORC6P38826 435 aa7.69□□□□□ -1.18
YML040WYML040W KIC1P38692 1080 aa7.68□□□□□ -1.18
YML040WYML040W TFB3Q03290 321 aa7.67□□□□□ -1.18
YML040WYML040W ILV3P39522 585 aaKnown RBP7.64□□□□□ -1.19
YML040WYML040W YOL036WQ08206 761 aa7.64□□□□□ -1.19
YML040WYML040W DCW1P36091 449 aa7.63□□□□□ -1.19
YML040WYML040W MPH3P0CE00 602 aa7.62□□□□□ -1.19
YML040WYML040W PKC1P24583 1151 aa7.61□□□□□ -1.19
YML040WYML040W GTT3P39996 337 aa7.61□□□□□ -1.19
YML040WYML040W CSN12P47130 423 aa7.61□□□□□ -1.19
YML040WYML040W AI4P03878 556 aa7.6□□□□□ -1.19
YML040WYML040W SSA2P10592 639 aaKnown RBP7.6□□□□□ -1.19
YML040WYML040W GAP1P19145 602 aaPredicted RBP7.59□□□□□ -1.19
YML040WYML040W RGR1P19263 1082 aa7.59□□□□□ -1.19
YML040WYML040W KTR1P27810 393 aaKnown RBP7.59□□□□□ -1.19
YML040WYML040W BRL1P38770 471 aa7.58□□□□□ -1.2
YML040WYML040W SET4P42948 560 aa7.57□□□□□ -1.2
YML040WYML040W TEA1P47988 759 aa7.57□□□□□ -1.2
YML040WYML040W HTA1P04911 132 aaKnown RBP7.56□□□□□ -1.2
YML040WYML040W HTA2P04912 132 aa7.56□□□□□ -1.2
YML040WYML040W MVP1P40959 511 aaKnown RBP7.55□□□□□ -1.2
YML040WYML040W MSB4Q12317 492 aa7.55□□□□□ -1.2
YML040WYML040W GLN1P32288 370 aaKnown RBP7.54□□□□□ -1.2
YML040WYML040W CLB5P30283 435 aa7.52□□□□□ -1.2
YML040WYML040W SLI15P38283 698 aa7.52□□□□□ -1.2
YML040WYML040W DAN4P47179 1161 aa7.52□□□□□ -1.2
YML040WYML040W BIM1P40013 344 aa7.52□□□□□ -1.21
YML040WYML040W TYW1Q08960 810 aaKnown RBP7.52□□□□□ -1.21
YML040WYML040W CSC1Q06538 782 aa7.51□□□□□ -1.21
YML040WYML040W YBL029C-AQ3E756 94 aa7.51□□□□□ -1.21
YML040WYML040W ATG32P40458 529 aa7.5□□□□□ -1.21
YML040WYML040W NIS1P53939 407 aa7.5□□□□□ -1.21
YML040WYML040W YEL023CP39992 682 aa7.49□□□□□ -1.21
YML040WYML040W YJL007CP47080 104 aa7.49□□□□□ -1.21
YML040WYML040W HST2P53686 357 aa7.49□□□□□ -1.21
YML040WYML040W FPK1P53739 893 aa7.48□□□□□ -1.21
YML040WYML040W YPR109WQ06104 294 aa7.47□□□□□ -1.21
YML040WYML040W CDC73Q06697 393 aa7.47□□□□□ -1.21
YML040WYML040W SUB2Q07478 446 aaKnown RBP7.47□□□□□ -1.21
YML040WYML040W TFB4Q12004 338 aa7.46□□□□□ -1.22
YML040WYML040W SIT4P20604 311 aa7.45□□□□□ -1.22
YML040WYML040W PTC4P38089 393 aa7.45□□□□□ -1.22
YML040WYML040W EAP1P36041 632 aaKnown RBP7.44□□□□□ -1.22
YML040WYML040W TRP5P00931 707 aaKnown RBP7.43□□□□□ -1.22
YML040WYML040W RPP1BP10622 106 aaKnown RBP7.43□□□□□ -1.22
YML040WYML040W WSC3Q12215 556 aa7.43□□□□□ -1.22
YML040WYML040W MMP1Q12372 583 aa7.43□□□□□ -1.22
YML040WYML040W BIO2P32451 375 aa7.42□□□□□ -1.22
YML040WYML040W YBL036CP38197 257 aa7.42□□□□□ -1.22
YML040WYML040W TIF1P10081 395 aaKnown RBP7.41□□□□□ -1.22
YML040WYML040W SCJ1P25303 377 aa7.41□□□□□ -1.22
YML040WYML040W JIP4Q03361 876 aa7.41□□□□□ -1.22
YML040WYML040W RAD59Q12223 238 aa7.41□□□□□ -1.22
YML040WYML040W ERG12P07277 443 aa7.4□□□□□ -1.22
YML040WYML040W SSA1P10591 642 aaKnown RBP7.4□□□□□ -1.22
YML040WYML040W ESS1P22696 170 aa7.4□□□□□ -1.22
YML040WYML040W YMR196WQ04336 1088 aa7.4□□□□□ -1.22
YML040WYML040W YJU3P28321 313 aa7.39□□□□□ -1.23
YML040WYML040W CSE4P36012 229 aa7.39□□□□□ -1.23
YML040WYML040W VNX1P42839 908 aa7.39□□□□□ -1.23
YML040WYML040W PKH3Q03306 898 aaPredicted RBP7.39□□□□□ -1.23
YML040WYML040W GEF1P37020 779 aa7.37□□□□□ -1.23
YML040WYML040W RSC30P38781 883 aa7.36□□□□□ -1.23
YML040WYML040W RPL34BP40525 121 aaKnown RBP7.36□□□□□ -1.23
YML040WYML040W TUM1Q08686 304 aaKnown RBP7.36□□□□□ -1.23
YML040WYML040W SUP45P12385 437 aaKnown RBP7.35□□□□□ -1.23
YML040WYML040W TTI1P36097 1038 aa7.35□□□□□ -1.23
YML040WYML040W DPL1Q05567 589 aa7.35□□□□□ -1.23
YML040WYML040W NOP8Q08287 484 aaPredicted RBP7.35□□□□□ -1.23
YML040WYML040W IOC2Q12072 812 aa7.35□□□□□ -1.23
YML040WYML040W SSA4P22202 642 aaKnown RBP7.34□□□□□ -1.23
YML040WYML040W TIF11P38912 153 aaKnown RBP7.34□□□□□ -1.23
YML040WYML040W MID1P41821 548 aa7.34□□□□□ -1.23
YML040WYML040W ULI1P43604 169 aa7.34□□□□□ -1.23
YML040WYML040W PEX21P50091 288 aa7.34□□□□□ -1.23
YML040WYML040W YML020WQ03722 664 aa7.33□□□□□ -1.24
YML040WYML040W MPC54Q08550 464 aa7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms