RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W COQ8P27697 501 aa6.94□□□□□ -1.3
PDP3YLR455W PTC3P34221 468 aaKnown RBP6.93□□□□□ -1.3
PDP3YLR455W JIP4Q03361 876 aa6.93□□□□□ -1.3
PDP3YLR455W YEL023CP39992 682 aa6.91□□□□□ -1.3
PDP3YLR455W DAN4P47179 1161 aa6.91□□□□□ -1.3
PDP3YLR455W ATH1P48016 1211 aa6.9□□□□□ -1.3
PDP3YLR455W PTC4P38089 393 aa6.89□□□□□ -1.31
PDP3YLR455W TFG1P41895 735 aaPredicted RBP6.89□□□□□ -1.31
PDP3YLR455W GUT1P32190 709 aa6.88□□□□□ -1.31
PDP3YLR455W NOP53Q12080 455 aaKnown RBP6.84□□□□□ -1.31
PDP3YLR455W SAP30P38429 201 aa6.82□□□□□ -1.32
PDP3YLR455W YDL129WQ07555 291 aa6.82□□□□□ -1.32
PDP3YLR455W SOL3P38858 249 aa6.79□□□□□ -1.32
PDP3YLR455W NST1P53935 1240 aa6.79□□□□□ -1.32
PDP3YLR455W SET1P38827 1080 aaKnown RBP6.77□□□□□ -1.33
PDP3YLR455W PML39Q03760 334 aa6.77□□□□□ -1.33
PDP3YLR455W AI4P03878 556 aa6.73□□□□□ -1.33
PDP3YLR455W MPH3P0CE00 602 aa6.73□□□□□ -1.33
PDP3YLR455W YGR273CP53329 174 aa6.73□□□□□ -1.33
PDP3YLR455W CHL1P22516 861 aaPredicted RBP6.7□□□□□ -1.34
PDP3YLR455W PRE3P38624 215 aa6.7□□□□□ -1.34
PDP3YLR455W ILV3P39522 585 aaKnown RBP6.7□□□□□ -1.34
PDP3YLR455W MID1P41821 548 aa6.7□□□□□ -1.34
PDP3YLR455W YDR344CQ05510 147 aa6.67□□□□□ -1.34
PDP3YLR455W ELP4Q02884 456 aaKnown RBP6.65□□□□□ -1.34
PDP3YLR455W PEX29Q03370 554 aa6.64□□□□□ -1.35
PDP3YLR455W RQC2Q12532 1038 aaKnown RBP6.64□□□□□ -1.35
PDP3YLR455W ARH1P48360 493 aa6.63□□□□□ -1.35
PDP3YLR455W KEX1P09620 729 aa6.61□□□□□ -1.35
PDP3YLR455W BCK2P33306 851 aa6.61□□□□□ -1.35
PDP3YLR455W IFH1P39520 1085 aa6.61□□□□□ -1.35
PDP3YLR455W SLI15P38283 698 aa6.6□□□□□ -1.35
PDP3YLR455W MPC54Q08550 464 aa6.59□□□□□ -1.35
PDP3YLR455W UBP14P38237 781 aaKnown RBP6.58□□□□□ -1.36
PDP3YLR455W VHR2P40041 505 aa6.58□□□□□ -1.36
PDP3YLR455W HAP5Q02516 242 aa6.57□□□□□ -1.36
PDP3YLR455W YLR326WQ06170 240 aaKnown RBP6.57□□□□□ -1.36
PDP3YLR455W YPR148CQ06523 435 aa6.56□□□□□ -1.36
PDP3YLR455W SPT23P35210 1082 aa6.55□□□□□ -1.36
PDP3YLR455W VRP1P37370 817 aa6.55□□□□□ -1.36
PDP3YLR455W DPL1Q05567 589 aa6.54□□□□□ -1.36
PDP3YLR455W NMA111P53920 997 aa6.53□□□□□ -1.36
PDP3YLR455W RAD54P32863 898 aa6.52□□□□□ -1.37
PDP3YLR455W PCS60P38137 543 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
PDP3YLR455W BNI4P53858 892 aa6.52□□□□□ -1.37
PDP3YLR455W VPS70P47161 811 aa6.51□□□□□ -1.37
PDP3YLR455W CDC73Q06697 393 aa6.5□□□□□ -1.37
PDP3YLR455W REF2P42073 533 aaPredicted RBP6.49□□□□□ -1.37
PDP3YLR455W YDR090CQ03193 310 aa6.49□□□□□ -1.37
PDP3YLR455W DMA1P38823 416 aa6.48□□□□□ -1.37
PDP3YLR455W XDJ1P39102 459 aa6.48□□□□□ -1.37
PDP3YLR455W PTC2P39966 464 aaKnown RBP6.48□□□□□ -1.37
PDP3YLR455W KIC1P38692 1080 aa6.47□□□□□ -1.37
PDP3YLR455W ISU2Q12056 156 aa6.47□□□□□ -1.37
PDP3YLR455W YML082WQ04533 649 aaKnown RBP6.46□□□□□ -1.38
PDP3YLR455W RPP1BP10622 106 aaKnown RBP6.45□□□□□ -1.38
PDP3YLR455W MAK21Q12176 1025 aaKnown RBP6.4□□□□□ -1.38
PDP3YLR455W COX6P00427 148 aa6.39□□□□□ -1.39
PDP3YLR455W RAM1P22007 431 aa6.39□□□□□ -1.39
PDP3YLR455W YPR015CQ12531 247 aa6.39□□□□□ -1.39
PDP3YLR455W PDR1P12383 1068 aa6.38□□□□□ -1.39
PDP3YLR455W CKB1P43639 278 aa6.38□□□□□ -1.39
PDP3YLR455W GAP1P19145 602 aaPredicted RBP6.36□□□□□ -1.39
PDP3YLR455W PEX21P50091 288 aa6.36□□□□□ -1.39
PDP3YLR455W ORC6P38826 435 aa6.35□□□□□ -1.39
PDP3YLR455W CSC1Q06538 782 aa6.35□□□□□ -1.39
PDP3YLR455W SAS10Q12136 610 aaPredicted RBP6.35□□□□□ -1.39
PDP3YLR455W DPS1P04802 557 aaKnown RBP6.34□□□□□ -1.39
PDP3YLR455W TFB4Q12004 338 aa6.34□□□□□ -1.39
PDP3YLR455W PBS2P08018 668 aa6.33□□□□□ -1.4
PDP3YLR455W YRR1Q12172 810 aa6.33□□□□□ -1.4
PDP3YLR455W GYP1Q08484 637 aa6.31□□□□□ -1.4
PDP3YLR455W TUM1Q08686 304 aaKnown RBP6.31□□□□□ -1.4
PDP3YLR455W MVP1P40959 511 aaKnown RBP6.29□□□□□ -1.4
PDP3YLR455W RGR1P19263 1082 aa6.26□□□□□ -1.41
PDP3YLR455W NUD1P32336 851 aa6.26□□□□□ -1.41
PDP3YLR455W SAS4Q04003 481 aa6.26□□□□□ -1.41
PDP3YLR455W BUD20Q08004 166 aaPredicted RBP6.26□□□□□ -1.41
PDP3YLR455W MAM3Q12296 706 aa6.26□□□□□ -1.41
PDP3YLR455W DSF2P38213 736 aa6.25□□□□□ -1.41
PDP3YLR455W STR2P47164 639 aa6.25□□□□□ -1.41
PDP3YLR455W ISM1P48526 1002 aa6.24□□□□□ -1.41
PDP3YLR455W YPR109WQ06104 294 aa6.24□□□□□ -1.41
PDP3YLR455W PRT1P06103 763 aaKnown RBP6.23□□□□□ -1.41
PDP3YLR455W SPB4P25808 606 aaPredicted RBP6.22□□□□□ -1.41
PDP3YLR455W NPL4P33755 580 aa6.22□□□□□ -1.41
PDP3YLR455W RAS1P01119 309 aa6.21□□□□□ -1.42
PDP3YLR455W PSE1P32337 1089 aaKnown RBP6.21□□□□□ -1.42
PDP3YLR455W IES2P40154 320 aa6.21□□□□□ -1.42
PDP3YLR455W SRC1Q03707 834 aa6.21□□□□□ -1.42
PDP3YLR455W SDH2P21801 266 aa6.2□□□□□ -1.42
PDP3YLR455W AMS1P22855 1083 aa6.18□□□□□ -1.42
PDP3YLR455W MRF1P30775 413 aaPredicted RBP6.18□□□□□ -1.42
PDP3YLR455W GCD11P32481 527 aaKnown RBP6.18□□□□□ -1.42
PDP3YLR455W NUP42P49686 430 aaKnown RBP6.17□□□□□ -1.42
PDP3YLR455W TY1A-DR4O74302 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-HP0C2I4 478 aaKnown RBP6.16□□□□□ -1.42
PDP3YLR455W TY1A-AP0CX57 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-PR1P0CX58 440 aa6.16□□□□□ -1.42
PDP3YLR455W TY1A-ORP0CX59 440 aa6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms